Oere005167.1
Basic Information
- Insect
- Osmoderma eremita
- Gene Symbol
- -
- Assembly
- GCA_031763485.1
- Location
- JARFOC010000389.1:175409-176620[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.01 2.3e+02 4.3 0.0 17 45 134 162 119 169 0.83 2 4 0.00025 5.7 9.4 0.2 22 46 167 191 161 193 0.89 3 4 4.1e-05 0.94 11.9 0.2 21 52 194 225 190 225 0.88 4 4 0.0032 74 5.8 0.0 21 48 222 249 220 252 0.90
Sequence Information
- Coding Sequence
- ATGGTTGATAGGAGGTACAACCATTTCAGCACTTTGGAGCCTGATGTTATCATAACTGATGGGACTCTGTTAGAGGATAAACTCTCCTTACAAAAAGCAATCCTTGATAAAGATCCAGTAATATTGGGACCGGAAATCTCGATTATTCCGGTACGGAGAAAAACTCCGCCAAGAATACGAATAAGAAACTTCCTGGCAGAATCAGGAACAGAAATCTCGGAAATAACGGAAAAGGTGAGATCGCCTAAAGGTACCGTGCGAATAATAACGCCGGGCGAGATCCAGAAGGCTGAAAACGGAAATTCCTACGCGAAACGAAAATCGCTACCGCTAGAAAAGTGTCACATATGCAAGAAGTTCTTCAAACGAATGAAAACCCACCTGTTGAAGCACGAAGAGGCCCGAAGGGACCCGAACGATCCCCTGACGTGTAAGCTGTGCATGAAGGCGTTCAACACTTTCAGTAATCTCAGTATCCACATGAGGACACATACGGGGGATAAACCGTACATTTGCGACGTGTGTCACAAGTCGTTCACGCAGTCTTGCAACCTGGTCAATCATCTTCGGATACACACGGGTGAGAGGCCGTACAAATGTCCGCATTGCGATCGCGCTTTTACGCAATCCGGCAATTTGACCAATCACATACGCTTACATACCGACGAGAAACCTTTCAAATGTCATTTTTGCGACAGGGGTTTCACACAATCGGGAAATCTAAATTCCCACATCAGAAACAATCATAAGATGAACGATTCTTTGAGGCAATTCGGTAATTTCCACTAA
- Protein Sequence
- MVDRRYNHFSTLEPDVIITDGTLLEDKLSLQKAILDKDPVILGPEISIIPVRRKTPPRIRIRNFLAESGTEISEITEKVRSPKGTVRIITPGEIQKAENGNSYAKRKSLPLEKCHICKKFFKRMKTHLLKHEEARRDPNDPLTCKLCMKAFNTFSNLSIHMRTHTGDKPYICDVCHKSFTQSCNLVNHLRIHTGERPYKCPHCDRAFTQSGNLTNHIRLHTDEKPFKCHFCDRGFTQSGNLNSHIRNNHKMNDSLRQFGNFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01253062;
- 90% Identity
- iTF_01124128;
- 80% Identity
- iTF_01124128;