Basic Information

Insect: Osmoderma eremita
Gene Symbol: -
Assembly: GCA_031763485.1
Location: JARFOC010000857.1:12403-15316[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 7.3e-05 0.019 17.7 0.2 1 23 181 203 181 203 0.99

2 12 2.4e-06 0.00061 22.3 0.9 1 23 209 231 209 231 0.98

3 12 0.00056 0.14 14.9 3.2 2 23 244 266 243 266 0.94

4 12 5.5e-07 0.00014 24.4 3.2 1 23 277 299 277 299 0.98

5 12 5.1e-06 0.0013 21.3 1.3 2 23 306 327 305 327 0.96

6 12 5.4e-09 1.4e-06 30.7 2.1 1 23 333 355 333 355 0.98

7 12 2.1e-07 5.3e-05 25.7 0.9 1 23 361 383 361 383 0.98

8 12 0.00016 0.04 16.6 0.7 1 23 389 411 389 411 0.97

9 12 8.7e-05 0.022 17.4 3.4 1 23 417 439 417 439 0.98

10 12 3.3e-06 0.00082 21.9 2.0 1 23 445 467 445 467 0.98

11 12 1.4e-05 0.0035 19.9 3.0 1 23 473 495 473 495 0.99

12 12 6.9e-06 0.0017 20.9 5.3 1 23 501 524 501 524 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	7.3e-05	0.019	17.7	0.2	1	23	181	203	181	203	0.99
2	12	2.4e-06	0.00061	22.3	0.9	1	23	209	231	209	231	0.98
3	12	0.00056	0.14	14.9	3.2	2	23	244	266	243	266	0.94
4	12	5.5e-07	0.00014	24.4	3.2	1	23	277	299	277	299	0.98
5	12	5.1e-06	0.0013	21.3	1.3	2	23	306	327	305	327	0.96
6	12	5.4e-09	1.4e-06	30.7	2.1	1	23	333	355	333	355	0.98
7	12	2.1e-07	5.3e-05	25.7	0.9	1	23	361	383	361	383	0.98
8	12	0.00016	0.04	16.6	0.7	1	23	389	411	389	411	0.97
9	12	8.7e-05	0.022	17.4	3.4	1	23	417	439	417	439	0.98
10	12	3.3e-06	0.00082	21.9	2.0	1	23	445	467	445	467	0.98
11	12	1.4e-05	0.0035	19.9	3.0	1	23	473	495	473	495	0.99
12	12	6.9e-06	0.0017	20.9	5.3	1	23	501	524	501	524	0.97

Sequence Information

Coding Sequence: ATGAAGCTGGATAAAATTTGCCGGGTATGCTTAGGAGAGAAAACAGGACTAAAACCAGTATTCACTGCGTGTATACCAGATATGATAATGAGCCTAGCAGCCATTCAAGTAATTGAAGGTGACGGATTACCGAATCAAATTTGTACTCAGTGTTTACAAACAGTTAATAGAGCGTTTAGCTTTAAGCAACAATGCGAAAAGTCGGACGAAGTACTTCGACAATATGTGAACACCTTGAATATTCGCATAACGTTGGAAAATGACCAGAGTATGATTTGCGAAGTTAAAAACGACGTGCTATTCGTGAGTAACGAGGTCCTGCAGGAGTCTTCGATATTTAGCGATATTTTTAATGATGAAGAGACACATTCCTTCGTTGATAATTTTGCTGTACAAAGTGCAGACTTCTCTGAAACGATGCAAAGTTTAAGAACAATTGCCGAGCAATGTTTGCCCGAGACATGGGAAAATGATCATAATTTAATTAGCACGCACGATTCTGAAAACAATTCTTGTCCGGAATTCGATTTGGAACAATTATACAAATGTCAGTTTTGTGAAGAAGCTTTTAAAGATGAATGGAGTTTAGGTGTTCATATGAAAATACATACCGGGCAAGCGAAATATTACTGTAATGTGTGCGGAAAAGAATGTAACACACCtacgttattaaataaacatatggCTATACATACGATCAGTCGACATGAgagaagaaaatgtatttgtatttgtaacTTATGTGGCAAGGAATGTGTCGatcccaaatatttaaagaaacacTACAAAGAAGATCACACCGATCAAAACGGATTACTGGAGAAGAAGCATACTTGCAATGTATGTGGGAAAAGatataaacagaataaaTTGTTAACTGTTCATATGAGATCGCATACAGGCGAGAGGCCTTTGAGCTGCGAAATGTGTGGAAAGACCTTTTCGTTACCTAGTTCCTTGCATAAACATCGATTAATACATTCCAACGATAGGAAACATAAATGCAATTTATGTGGGAAGACGTTCAGTCAGTCTTCTAATTTAGTAGTGCACATTCGAACACACACAGGTGAGAAGCCGTATGCTTGCAACGTTTGCGGCAAGAAATGTGCAagtaatgttaatttaaatgtCCATATGAGAACGCATTCGGGTGAAAAACCTTATCGTTGTTTAAAATGTGACGGTGCATTTGCTACAAAAGGACAGTTGCGGAAACATAATTTGAGGCACACGGGGGAGCTTCCCTATAAATGCTGGCATTGCGGGAAAGCATTTCGTCAAAAAGATACTCGTGACACCCACGTTAGGTACCACACCGGTGAGAGACCCCACGTTTGCACTATGTGTCCAAAAAAGTACATAGCGGCTAGTCATTTGAGGGCCCACATGAGAACTCACACGGGTGAAAGGAAATACCAGTGCAGTATTTGTTCGAAGGCGTTTACCGAATGCAAAACCTTAAAATCTCATATATTAACACATACCGGACAGAGGCCGTACTCCTGTAAATTCTGCGGACGGTGTTTTACACAAAATGGGGCGCTCAACTCGCATATTAGAAATTGCCATGCTGTTTAA
Protein Sequence: MKLDKICRVCLGEKTGLKPVFTACIPDMIMSLAAIQVIEGDGLPNQICTQCLQTVNRAFSFKQQCEKSDEVLRQYVNTLNIRITLENDQSMICEVKNDVLFVSNEVLQESSIFSDIFNDEETHSFVDNFAVQSADFSETMQSLRTIAEQCLPETWENDHNLISTHDSENNSCPEFDLEQLYKCQFCEEAFKDEWSLGVHMKIHTGQAKYYCNVCGKECNTPTLLNKHMAIHTISRHERRKCICICNLCGKECVDPKYLKKHYKEDHTDQNGLLEKKHTCNVCGKRYKQNKLLTVHMRSHTGERPLSCEMCGKTFSLPSSLHKHRLIHSNDRKHKCNLCGKTFSQSSNLVVHIRTHTGEKPYACNVCGKKCASNVNLNVHMRTHSGEKPYRCLKCDGAFATKGQLRKHNLRHTGELPYKCWHCGKAFRQKDTRDTHVRYHTGERPHVCTMCPKKYIAASHLRAHMRTHTGERKYQCSICSKAFTECKTLKSHILTHTGQRPYSCKFCGRCFTQNGALNSHIRNCHAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01121040;
90% Identity: iTF_00308229;
80% Identity: -