Basic Information

Insect: Cetonia aurata
Gene Symbol: -
Assembly: GCA_949128085.1
Location: OX421886.1:26947780-26950263[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 6.2e-05 0.011 17.7 0.2 1 23 180 202 180 202 0.99

2 12 6.6e-06 0.0012 20.7 0.4 1 23 208 230 208 230 0.97

3 12 5.1e-05 0.0093 17.9 1.6 2 23 243 265 242 265 0.92

4 12 3.8e-08 7e-06 27.8 1.7 1 23 276 298 276 298 0.99

5 12 4.3e-06 0.00079 21.3 1.3 2 23 305 326 304 326 0.96

6 12 3.3e-09 6e-07 31.1 1.9 1 23 332 354 332 354 0.98

7 12 8.2e-08 1.5e-05 26.7 1.0 1 23 360 382 360 382 0.99

8 12 0.00041 0.075 15.1 1.1 1 23 388 410 388 410 0.97

9 12 0.00011 0.021 16.9 3.3 1 23 416 438 416 438 0.98

10 12 1.6e-06 0.00029 22.7 0.9 1 23 444 466 444 466 0.98

11 12 1.5e-05 0.0027 19.7 2.4 1 23 472 494 472 494 0.99

12 12 3.4e-06 0.00063 21.6 2.8 1 23 500 523 500 523 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	6.2e-05	0.011	17.7	0.2	1	23	180	202	180	202	0.99
2	12	6.6e-06	0.0012	20.7	0.4	1	23	208	230	208	230	0.97
3	12	5.1e-05	0.0093	17.9	1.6	2	23	243	265	242	265	0.92
4	12	3.8e-08	7e-06	27.8	1.7	1	23	276	298	276	298	0.99
5	12	4.3e-06	0.00079	21.3	1.3	2	23	305	326	304	326	0.96
6	12	3.3e-09	6e-07	31.1	1.9	1	23	332	354	332	354	0.98
7	12	8.2e-08	1.5e-05	26.7	1.0	1	23	360	382	360	382	0.99
8	12	0.00041	0.075	15.1	1.1	1	23	388	410	388	410	0.97
9	12	0.00011	0.021	16.9	3.3	1	23	416	438	416	438	0.98
10	12	1.6e-06	0.00029	22.7	0.9	1	23	444	466	444	466	0.98
11	12	1.5e-05	0.0027	19.7	2.4	1	23	472	494	472	494	0.99
12	12	3.4e-06	0.00063	21.6	2.8	1	23	500	523	500	523	0.97

Sequence Information

Coding Sequence: ATGAAGCTAGATAAAATTTGTCGGGTATGTTTGGGAGAAAAAACAGGATTAAAACCAATTTTTACTGCATGTATACCAGATATGATAATGAGTCTTGCAGCGGTTcaaGTAATTGAAGGTGATGGGTTGCCCAATCAAATTTGCACTCAGTGTTTACAGACAGTTAATAGATCATTTAGCTTTAAACAACAATGTGAGAAGTCTGATGAAGTACTTCGGCAATATCTAAACACTTTGAACATTCATATAACATTGGAAAATGATCAAAGTATGATTTCTGAAGTTAAAAATGATGTGTTGTTTGTTAGTAATGAAGTTCTGCAGGAGTCTTCGATATTTagtgatatttttaatgatgAAGAGACGCATTCCTTTGTTGATAATTTTGCTGTACAAAATGCAGACTTTTCGGAAACAATGCAAAGTTTAAGAACAATTGCTGAGCAATGTTTACCAGAGACATGGGAGAATGACCATAATTTAATTAGTACACATGATTCTGAAAATAATTCCTGTCCAGAATTTGGTTTAGAATTATATAAATGTCAGTTTTGTGAAGAAGCTTTTAAAGatGAATGGAGCTTAGGTGTTCATATGAAGATACATACTGGACAagcaaaatattattgtaatgtgTGTGGAAAGGAATGTAATACGCCTGCATTATTAAATAAGCATATAGCTCTACATTCTATCGGGCGAAATGAAAGAAGAAAGAGCATTTGTATTTGTAACTTATGTGGCAAGGAATTTGTTGATCCTAAATATCTGAGGAAACACTTTAAAGAAGATCATACTGATCAAAATGGATTACTAGAGAAGAAATACACGTGCAATATTTGCGGGAAAAGatataaacaaaataagttaTTGACAGTTCATATGAGATCACATACAGGCGAAAGACCTCTAAGTTGCGAAATGTGCGGGAAAACCTTTTCCTTACCCAGTTCGTTACATAAACATCGATTAATACATTCCAATGAAAGAAAACATAAATGCAATTTATGTGGGAAAACATTCAGCCAGTCTTCTAATTTAGCAGTCCACATTAGAACACATACAGGAGAGAAACCGTACGTTTGTAATGTTTGTGGCAAGAAGTGTGCCAGCAATGTTAATTTGAATGTTCATATGAGAACTCATTCCGGCGAGAAGCCATACCGTTGCTTAAAATGTGAGAGTGCATTTGCCACAAAAGGGCAATTACGAAAGCATAATTTGCGGCATACAGGAGAATTGCcttataaatgttggcattgtGGGAAAGCATTTCGCCAGAAAGAAACGCGCGATACTCACGTTAGGTACCATACCGGCGAAAGACCATATATTTGCACTATGTGTCCAAAAAAGTATATAGCAGCGAGTCATTTAAGGGTACATATGAGAACTCACACAGGCGAAAGAAAGTACGAGTGCAGTATTTGCTCGAAAGCATTTACCGAatgtaaaactttaaaatcTCATATATTAACGCATACTGGCCAAAGGCCGTACTCTTGTAAATTCTGCGGCAGGAGTTTTACGCAGAATGGAGCTCTGAACTCGCATGTTAGAAACTGCCATGCTGTTTAA
Protein Sequence: MKLDKICRVCLGEKTGLKPIFTACIPDMIMSLAAVQVIEGDGLPNQICTQCLQTVNRSFSFKQQCEKSDEVLRQYLNTLNIHITLENDQSMISEVKNDVLFVSNEVLQESSIFSDIFNDEETHSFVDNFAVQNADFSETMQSLRTIAEQCLPETWENDHNLISTHDSENNSCPEFGLELYKCQFCEEAFKDEWSLGVHMKIHTGQAKYYCNVCGKECNTPALLNKHIALHSIGRNERRKSICICNLCGKEFVDPKYLRKHFKEDHTDQNGLLEKKYTCNICGKRYKQNKLLTVHMRSHTGERPLSCEMCGKTFSLPSSLHKHRLIHSNERKHKCNLCGKTFSQSSNLAVHIRTHTGEKPYVCNVCGKKCASNVNLNVHMRTHSGEKPYRCLKCESAFATKGQLRKHNLRHTGELPYKCWHCGKAFRQKETRDTHVRYHTGERPYICTMCPKKYIAASHLRVHMRTHTGERKYECSICSKAFTECKTLKSHILTHTGQRPYSCKFCGRSFTQNGALNSHVRNCHAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01121040;
90% Identity: iTF_01123951;
80% Identity: -