Basic Information

Gene Symbol
BTBD3
Assembly
GCA_031763485.1
Location
JARFOC010075685.1:6558-12132[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-24 1.8e-21 78.6 0.0 4 109 100 206 98 207 0.94
2 2 4.8 4.3e+03 0.2 0.0 77 108 206 237 204 239 0.83

Sequence Information

Coding Sequence
ATGGCAATGAACAATTTATACTCAAAAATTGGTACTAAACCCGTTAAAAGGGTACAAGAAAATATGCCAGTATCGCAAACAAACGCTTGGGTGAACGCAGAAACTCTAAACAATGGCTCCCTCAGTCTCTCACCGCCGCACATTATATCACAGCGTGAAAGTCTACAGGTGATGCAACCTGCCAGTGCACCGGGTTCACCTCCAACGAGTCCATGTCTTTCCCCGGTGAACACCCTAAGCACCTTGGACCCTAACTGGCAAGCCACAAAACCAACAGTACGGGAACGAAATGCTGCTATGTTCAATAATGATTTGATGGCAGATGTGCGGTTTATAGTTGGCAGCCCCGGATCAACACAAGTAATACCGGCACACAAATATGTCTTGGCAACTGGCAGCTCTGTGTTTTACGCGATGTTTTATGGTGGTCTAGCGGAATGTAAAGATGCCATCGAAGTACCTGACGTTGAACCTTCGGCTTTCTTGACGTTATTAAAATATCTTTATTGTGATGAAATACAGTTAGAAGCCGATACCGTTTTAGCTACGTTATACGTAGCTAAAAAATACATCGTGCCCCATTTAGCGAGAGCCTGTGTTAACTATTTAGAGACAAGTTTGACAGCAAAGAATGCCTGTTTATTATTGAGCCAATCGAGGTTATTTGAGGAGCCTGAGCTTATGCAAAGGTGTTGGGAGGTTATCGACGCCCAGGCTGAAATGGCTCTAAAATCGGATGGATTCGTAGATATCGACATGTCCACTCTAGAATCGGTTTTAGGGCGCGAAACTTTGAATTGCAAAGAAATGAATCTCCTAGAGGCGGCACTGAATTGGGCAGGCGCCGAATGTATAAGACGAGATATCGAACCAACGCCACAAAATAGGAGGTCCGTCCTGGGAAATGCTTTGTATCTGATAAGAATACCTACGATGACACTGGAGGAATTCGCGAACGGCGCAGCTCAACTCGGTATTTTGACACAGCAAGAGActatagatatatttttccaCTTCACCGCAACTAATAAGCCAGTATTGCAATATCCGATAAAACCTAGGGCTGGTTTAAAATCTCAGgTATGTCACCGGTTCCAATCATGTGCCTATCGTTCGAATCAATGGAGATACAGAGGTCGCTGTGATAGCATACAATTCTCGGTGGATCGACGAATTTTCGTAGTAGGTTTTGGATTATACGGTTCATCCAATGGCGCAGCCGATTACAACGTGAAAATCGAGCTGAAGCGATTGGGGCGCGTTCTAGCGGAAAACAATACGAAATTCTTTTCGGACGGTTCTAGCAACACTTTCCACGTCTACTTCGACAATCCGATACAGATCGAACCGGAATGTTTCTATACGGCCTCCGCGATTTTAGACGGCGGTGAATTGAGTTATTTTGGACAGGAGGGCATGAGCGAAGTGACTGTGGGTACGGTAACGTTTCAGTTTCAGTGCTCTTCGGAGAGTACGAACGGGACCGGTGTGCAAGGCGGACAGATACCGGAATTGATATTTTACGGGCCTTCCTATGAAGAGTTTTGA
Protein Sequence
MAMNNLYSKIGTKPVKRVQENMPVSQTNAWVNAETLNNGSLSLSPPHIISQRESLQVMQPASAPGSPPTSPCLSPVNTLSTLDPNWQATKPTVRERNAAMFNNDLMADVRFIVGSPGSTQVIPAHKYVLATGSSVFYAMFYGGLAECKDAIEVPDVEPSAFLTLLKYLYCDEIQLEADTVLATLYVAKKYIVPHLARACVNYLETSLTAKNACLLLSQSRLFEEPELMQRCWEVIDAQAEMALKSDGFVDIDMSTLESVLGRETLNCKEMNLLEAALNWAGAECIRRDIEPTPQNRRSVLGNALYLIRIPTMTLEEFANGAAQLGILTQQETIDIFFHFTATNKPVLQYPIKPRAGLKSQVCHRFQSCAYRSNQWRYRGRCDSIQFSVDRRIFVVGFGLYGSSNGAADYNVKIELKRLGRVLAENNTKFFSDGSSNTFHVYFDNPIQIEPECFYTASAILDGGELSYFGQEGMSEVTVGTVTFQFQCSSESTNGTGVQGGQIPELIFYGPSYEEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00308142; iTF_00022273; iTF_00629889; iTF_00631586; iTF_00084004; iTF_00424009; iTF_00620654; iTF_00632210; iTF_00904212; iTF_00048727; iTF_00902362; iTF_00049372; iTF_01258209; iTF_00466518; iTF_00465082; iTF_01480259; iTF_00362628; iTF_01272270; iTF_01251186; iTF_00807733; iTF_01058532; iTF_01059212; iTF_00946726; iTF_01373106; iTF_00727583; iTF_00307049; iTF_01131656; iTF_01286638; iTF_01504817; iTF_01212766; iTF_00169676; iTF_00841965; iTF_00429988; iTF_00470084; iTF_00767334; iTF_01104870; iTF_01225958; iTF_00029447; iTF_00929703; iTF_01287335; iTF_00852968; iTF_01039404; iTF_01041036; iTF_00768914; iTF_01278295; iTF_01345113; iTF_01040252; iTF_01275517; iTF_00413666; iTF_00130659; iTF_01024201; iTF_00394666; iTF_00764876; iTF_00903420; iTF_00387396; iTF_00792326; iTF_01164996; iTF_01566372; iTF_01106501; iTF_00911209; iTF_00735946; iTF_00459088; iTF_00056742; iTF_00026207; iTF_00392006; iTF_00392869; iTF_00278311; iTF_00395604; iTF_00755912; iTF_00328363; iTF_01163311; iTF_00078730; iTF_00838730; iTF_00032162; iTF_01518178; iTF_00950019; iTF_00030340; iTF_00789477; iTF_00270055; iTF_01291914; iTF_00854156; iTF_00951053; iTF_00399662; iTF_00641679; iTF_00978511; iTF_00003120; iTF_01295315; iTF_01294004; iTF_00031221; iTF_00268726; iTF_00272919; iTF_00927866; iTF_01284861; iTF_00271456; iTF_00813835; iTF_01369933; iTF_00166210; iTF_00886594; iTF_01126562; iTF_01400517; iTF_01410117; iTF_00920774; iTF_00415240; iTF_01290536; iTF_01185257; iTF_00244396; iTF_01329934; iTF_01283538; iTF_00870707; iTF_00753109; iTF_01311670; iTF_01310711; iTF_00110712; iTF_00639672; iTF_01014776; iTF_00369658; iTF_00167741; iTF_01227453; iTF_00722238; iTF_01096766; iTF_00647327; iTF_01568159; iTF_00422800; iTF_00138226; iTF_00137110; iTF_00981305; iTF_00117204; iTF_00848408; iTF_00814518; iTF_01121846; iTF_00987255; iTF_00388857; iTF_00740155; iTF_01128655; iTF_00332561; iTF_01060838; iTF_01510893; iTF_00239315; iTF_01530399; iTF_01216081; iTF_01240977; iTF_00431561; iTF_01188403; iTF_00444278; iTF_00376439; iTF_01239290; iTF_01351900; iTF_01107710; iTF_01120978; iTF_00989282; iTF_01097666; iTF_01371463; iTF_00627372; iTF_01481037; iTF_01098618; iTF_00434270; iTF_01499006; iTF_00740959; iTF_01567092; iTF_00396424; iTF_01384972; iTF_00209935; iTF_00243410; iTF_00894963; iTF_01565718; iTF_00678585; iTF_01402207; iTF_01344140; iTF_01343208; iTF_01349775; iTF_01435121; iTF_00442965; iTF_01132297; iTF_01308790; iTF_01308117; iTF_01348991; iTF_00993664; iTF_00070229; iTF_01211064; iTF_01366453; iTF_00923834; iTF_01137019; iTF_01229851; iTF_01296638; iTF_01307359;
90% Identity
iTF_00196446;
80% Identity
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