Oere040603.1
Basic Information
- Insect
- Osmoderma eremita
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_031763485.1
- Location
- JARFOC010037057.1:1-3430[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-23 5.9e-19 70.8 1.8 223 300 1 79 1 79 0.90 2 2 0.0052 96 4.4 0.8 120 164 77 121 77 124 0.90
Sequence Information
- Coding Sequence
- GTTCGGCTGGCCCGATTCATGAAAGAGAAGGGCGAACTGCAAGATCAAATTAGTCATCTGAAGTTGGAGCTGGAGGAAGAAAGAAGCAAGCGGCGGAAATCGAACGCGTCTGGTATCGCATTGAACGGCCCGACGGCCGAAGGAGATTACGATGCTGCGGATATTCAAAgAGAAGTCGGCAAACAATTAGCGGAATACAAGTTCCGCTCGCAGAAAGCTGAACAGGATGTGGCAACGTTACAAGCGACGGTTGCCCGATTAGAAAGTCAAGTAATTAGATACAAATCGGCCGCGGAAGTTTCGGAAAAATCGGAAGAGGCACTAAAGGCGGAGAAACGAAAATTACAAAGAGAGGTCAGTAGTTTGCTAATTGTTACTTATATGATGTaa
- Protein Sequence
- VRLARFMKEKGELQDQISHLKLELEEERSKRRKSNASGIALNGPTAEGDYDAADIQREVGKQLAEYKFRSQKAEQDVATLQATVARLESQVIRYKSAAEVSEKSEEALKAEKRKLQREVSSLLIVTYMM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -