Olig009866.1
Basic Information
- Insect
- Osmia lignaria
- Gene Symbol
- SNAPC4
- Assembly
- GCA_012274295.1
- Location
- NW:3097603-3101437[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.1 6.3e+02 -0.2 0.0 3 18 163 178 162 190 0.90 2 5 1e-11 5.7e-09 35.1 0.4 1 45 266 312 266 313 0.95 3 5 4.5e-08 2.5e-05 23.5 0.6 4 43 323 366 322 369 0.96 4 5 1.2e-12 6.7e-10 38.1 0.0 1 42 375 417 375 418 0.97 5 5 6.1e-12 3.4e-09 35.9 0.0 1 41 428 468 428 470 0.97
Sequence Information
- Coding Sequence
- ATGAACACGTTAACGAGTGACAATGATTTATTCAATACATTGGTGTTAGAAAACATCTCGCCTCAATGTCGTAacgaaagtaattttaaaactgCTTACGAAATAAATCAATTCGAAAAAAGTAATATCTTGGAAGCATCTATCAATGATTGTTCATTGCAAGAAATATATCAAAGTAAAAACGACGTTATGGAATGCAATGTCGAAGATTGTAATAGTGTGTTGAACGTTAATGAGCAAATAATTTCCTCTTTGTTAGATTTAAAAAGACACATAACCTCTGCTCTTCagaaatgtgaaaaaaaattgatagtGATAGAAACAAGTTTACAGAAACATTCAGGTGGAGAtacaaagattttaatttgtaatgcTGGTATACCATACTTCAAAGAtagaaattacttttttccACCTAAAAACGAAGATGAAAtactaaaagaaaattggaaagaaCTGCAGCTGAGAAATCTTCCCAAAGTCTGTTCATGGACAATTAAGGAAAGAAACGTACTTCTAAAagcaataaaagaagaagctaTCGCTGATGTACTACGTTCTCAAAAGACAGATTGTACGACGGTTGATGGGCTAACAGTTAAATCTATTATTAAGGTtgaagaggagaggagagaggaCAAAACGTTCCCACCTACAGATTTCTCAGAAATTGTTGGcccattagaaaaaaaagaatttgattGGTTCAAAATATCGTCTATTCATTTTGACGATATACATTCTCCGCTTGATTGTCGTGTTATGTGGAACGTTTTCCTTCATCCTGATATCAACAAAAACGTTTGGCCAAAATCGGAAGacgttaaattgaaagaaattgtaaagaaacataaatttcaaaactggGACAAAATTGCTAAAGATTTGAGTACAAATCGCACTGCGTATCAATGTTTTATTAGATACAACACGACTAAAAAGTTGCCTAAAGTTCAAAATTACACGTGGAAATCTGAAGAAGACGAGAGACTTTTAAAACTGGTCGATATATTTAAAATCGGTGATTTTATTCCCTGGGGTGAAGTGGCCAATTGGATAAAAAATAGAACTAAACAACAAGTTTACTTCAGGTGGACGTACAGCTTGTCGCCTTATTTAATCAAAGGTAGATTCACTAAAGCCGAAGATAAACTTTTAAAAGATGCTGTTATTAAGTATGGTACAAATTTTCGTAAAATATCAGCTGCATTAATGCCTAATAGATCGACCGTTCAACTTCATGATcgttatgaaatattaatctccaatcaaattgaaaaaaggaaagtatgGACGTTTGCAGAAGATTCAAAATTGCTTGATCTGTTTGCACGTTTTGGTCCAAATTGGTCGAGAATAGCTAAAGCATTTTCAAGCAAAACTAGAACTCAGCTGAGACATCGGCACACAGCTCTACAGAAGTACATTAAAAGAGGCATTTCTCTGCCTGAACTACATAGAAATCAGTTCCCTACTATCAACAAAACCAGAAATAAACAGAGGGAAAAGATATCTTACAAGGATACACTTGATCAAATTATGAATCCATCGAACGAACACAATGACAATAATATAGATACAGAATTaatcaagtatttttatacaaaacaaaAAGCAACGCTCGTTCATAAGAATAAGCTTTATACTACCGAACAGTTATCACACGATACAAAAAAGTTGTACAGTATTTTACAACAATTACATGCTAAACTTCGCATACCCGATAACATCgctaatataaaattaaccgATAAAGATCAACAACttttatattcattgaaaGAATATGCAAAGCTGAAGAGTGATACGGAAAAACGCTTTCAAGTTATAGATGAATGCAGTTTACGCATGTTTGGAACAAATCATGATAAACGAGAAGATTCTCACTTTATACCGCCACCTCCTTCTGATTcgcaaataaaattgaaatcaagTAAATCGGTCGAAAGTAAATGCATtgattacaatttaaatacaaacGATAAGTTTTTAGTTGACAAACCGGCAGAAATGAGTACTCCAGATTTTGTCATTTCTCACATTGGTGGTCACGAGCAACAATTGcagtttcaaaaattaaatcggTTATTTCAAGTTACCGATGTCGGCGATAAACGGTCTTACTTACGAAATGCTTCTATACGTCCAACCAAAATATTCTTGTTAcagcaaaataataataacttgACCGATAGAAAGGATTCAAGTGGCAACGATAAATTAACAGAAATCGGAACAATGGTTCGTTCTGAATGCAATGCTATATCcttcgaaagaaaaagtgtCGATACTCGTAGGCATGTAAAGTTACAAAGCGATAATCACAGGAAATCGCGCATGGAAaccgttaaaaaaaattacgcGTTATTTACTATGCCCGAAGAGATTCGGTATTCATCGTCTACTTCCGAAACAGAGATAACTACGGAAAAGGATGTATCCGTGATAGAAGCAACCTATGCAACCATGTtgagtttcaaaaatttaatacatttcaaacGATTTAATGAAAGTTATATCGGATCGAATCAATTTTTGACGCAACAATCGTATAGGTTTGAGGAAGCGTTCAAATTATTGGAAACTCGTTTAGAACAACTATTTCGGTATCCAATAGGTTTGTCAAAAACTGCATTGCCAGAAGTTTATGTAATAGATACCACGGAGAACACAAATTCGAATGGAAAATCTTCCGATgtatcgaaaataaaaaagttacaaacattcgataaaagtaataaagatGTAAGCTGA
- Protein Sequence
- MNTLTSDNDLFNTLVLENISPQCRNESNFKTAYEINQFEKSNILEASINDCSLQEIYQSKNDVMECNVEDCNSVLNVNEQIISSLLDLKRHITSALQKCEKKLIVIETSLQKHSGGDTKILICNAGIPYFKDRNYFFPPKNEDEILKENWKELQLRNLPKVCSWTIKERNVLLKAIKEEAIADVLRSQKTDCTTVDGLTVKSIIKVEEERREDKTFPPTDFSEIVGPLEKKEFDWFKISSIHFDDIHSPLDCRVMWNVFLHPDINKNVWPKSEDVKLKEIVKKHKFQNWDKIAKDLSTNRTAYQCFIRYNTTKKLPKVQNYTWKSEEDERLLKLVDIFKIGDFIPWGEVANWIKNRTKQQVYFRWTYSLSPYLIKGRFTKAEDKLLKDAVIKYGTNFRKISAALMPNRSTVQLHDRYEILISNQIEKRKVWTFAEDSKLLDLFARFGPNWSRIAKAFSSKTRTQLRHRHTALQKYIKRGISLPELHRNQFPTINKTRNKQREKISYKDTLDQIMNPSNEHNDNNIDTELIKYFYTKQKATLVHKNKLYTTEQLSHDTKKLYSILQQLHAKLRIPDNIANIKLTDKDQQLLYSLKEYAKLKSDTEKRFQVIDECSLRMFGTNHDKREDSHFIPPPPSDSQIKLKSSKSVESKCIDYNLNTNDKFLVDKPAEMSTPDFVISHIGGHEQQLQFQKLNRLFQVTDVGDKRSYLRNASIRPTKIFLLQQNNNNLTDRKDSSGNDKLTEIGTMVRSECNAISFERKSVDTRRHVKLQSDNHRKSRMETVKKNYALFTMPEEIRYSSSTSETEITTEKDVSVIEATYATMLSFKNLIHFKRFNESYIGSNQFLTQQSYRFEEAFKLLETRLEQLFRYPIGLSKTALPEVYVIDTTENTNSNGKSSDVSKIKKLQTFDKSNKDVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01122358;
- 90% Identity
- iTF_01122358;
- 80% Identity
- -