Obic001858.1
Basic Information
- Insect
- Osmia bicornis
- Gene Symbol
- SNAPC4
- Assembly
- GCA_907164935.1
- Location
- NC:245640-248662[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.4 1.5e+03 -0.2 0.0 3 18 163 178 162 190 0.90 2 5 3.1e-11 1.4e-08 35.1 0.4 1 45 266 312 266 313 0.95 3 5 1.3e-07 6e-05 23.5 0.6 4 43 323 366 322 369 0.96 4 5 3.6e-12 1.6e-09 38.1 0.0 1 42 375 417 375 418 0.97 5 5 1.8e-11 8.3e-09 35.9 0.0 1 41 428 468 428 470 0.97
Sequence Information
- Coding Sequence
- ATGAACACGTTAACGAGTGACAATGATTTATTCAAAACATTGGTGTTAGAAAATATCTCGCCTCAATGTCGTAAcgaaagtaattttaaaactgCTTACGAAATAAATCAATTCGAAAAAAGTAATATCATGGAAGCATCTATCAATGATTGTTCATTGCAAGAAATATATCAAACTAAAAGCGACATTATGGAATGCAATGTCGAAGATTGTAATAGTGTGTTGAACGTTAATGAGCAAATAATTTCCTCTTTGTTAGATTTAAAAAGACACATAACCTCTGCTCTTCAGAAatgtgaaaaaaaattgatagtGATAGAAACAAGTTTACAGAAACATTCAGGTGGAGATGCAaagattttaatttgtaaCGCTGGTATACCATACTTCAAAGATAGAAATTACTTTTTTCCACCTAAAAACGAAGATGAAATActaaaagaaaattggaaagaaCTGCAGCTGAGAAACCTTCCCAAAGTCTGTTCATGGACAATTAAGGAAAGAAATGTACTTCTAAAAGCGATAAAAGAAGAAGCTATAGCTGATGTACTACGTTCTCAAAAGACAGATTGTACGACGGTTGATGGGCTGACAGTTAAATCTATTATTAAGGTTGAAGAGGAGAGGAAAGAGGACAAAACGTTCCCACCTACAGATTTCTCAGAAATTGTTGGCCcgttagaaaaaaaagaatttgattGGTTCAAAATATCGTCTATTCATTTTGACGATATACATTCTCCGCTTGATTGTCGTGTTATGTGGAACGTTTTCCTTCATCCTGATATCAACAAAAACGTTTGGCCAAAATCGGAAGACgttaaattgaaagaaattgtaaagaaacataaatttcaaaactgGGACAAAATTGCTAAAGATTTGAGTACAAATCGCACTGCGTATCAATGTTTTATTAGATACAACACGACTAAAAAGTTGCCTAAAGTTCAAAATTACACATGGAAATCTGAAGAAGACGAGAGACTTTTAAAACTGGTCGATATATTTAAAATCGGTGATTTTATTCCCTGGGGTGAAGTGGCCAATTGGATAAAAAATAGAACTAAACAACAAGTTTACTTCAGGTGGACGTACAGCTTGTCGCCTTATTTAATCAAAGGTAGATTCACTAAAGCCGAAGATAAACTTTTAAAAGATGCTGTTATTAAGTATGGTACAAATTTTCGTAAAATATCAGCTGCATTAATGCCTAATAGATCGACCGTTCAACTTCATGATcgttatgaaatattaatctccaatcaaattgaaaaaaggaaagtatGGACGTTTGCAGAAGATTCAAAATTGCTTGATCTGTTTGCACGTTTTGGTCCAAATTGGTCGAGAATAGCTAAAGCATTTTCAAGCAAAACTAGAACTCAGCTGAGACATCGGCACACAGCTCTACAGAAGTACATTAAAAGAGGCATTTCTCTGCCTGAACTACATAGAAATCAGTTCCCTACTATCAACAAAACCAGAAATAAACAGAGGGAAGAGATATCTTACAAGGATACACTTGATCAAATTATGAATCCATCGAACGAACACAATGACAATAATATAGATACAGAATTAATCaagtatttttatacaaaacaaaaaGCAACGCTCGTTCATAAGAATAAGCTTTATACTACCGAACAGTTATCACACGATACAAAAAAGTTGTACAGTATTTTACAACAATTACATGCTAAACTTCGCATACCCGATAACATCgctaatataaaattaaccgATAAAGATCAACAACTTTTATATTCATTGAAAGAATATGCAAAGCTGAAGAGCGATACGGAAAAACGCTTTCAAGTTATAGATGAATGCAGTTTACGCATGTTTGGAACAAATCATGATAAACGAGAAGATTCTCACTTTATACCGCCACCTCCTTCTGATTcgcaaataaaattgaaatcaaGTAAATCGGTCGAAAGTAAATGCATTGATTACAATTTAAATACAAACGATAAGTTTTTAGTTGACAAACCGGCAGAAATGAGTACTCCAGATTTTGTCATTTCTCACATTGGTGGTCACGAGCAACAGTTGCAGTTTCAAAAGTTAAATCGGTTATTTCAAGTTACCGATGTCGCCGATAAACAGTCTTACTTACGAAATGCTTCTATACGTCCAACCAAAATATTCTTGTTACagcaaaataataataacttgaCCGATAGAAGGGATTCAAGTGGCAACGATAAATTAACAGAAATCGGAACAATGGTTCGTTCTGAATGCAATGATACTGCTATATCCTTCGAAAGAAAAAGTGTCGATGCTCGTAGGCACGTAAAGTTACAAAGCGATTATCACAGGAAATCGCGCATGGAAAccgttaaaaaaaattacgCGTTATTTACTATGCCCGAAGAGATTCGGTATTCATCGTCTACTTCCGAAACAGAGATAACTACGGAAAAGGATGTATCCGTGATAGAAGCAACCTATGCAACCATGTTgagtttcaaaaatttaatacatttGAAACGATTTAATGAGAGTTATATCGGATCGAATCAATTTTTGACGCAACAATCGTATAGGTTTCAGGAAGCGATCAAATTATTGGAAACTCGTTTAGAACAACTATTTCGTTATCCGATAGGTTTGTCAAAAACTGCATTGCCAGAAGTTTATGTAATAGATACCACGGAGAACACAAATTCGAATGGAAAATCTTCCAATGtatcgaaaataaaaaagttacaaACATTCGATAAAAGTAATAAAGATGTAAGCTGA
- Protein Sequence
- MNTLTSDNDLFKTLVLENISPQCRNESNFKTAYEINQFEKSNIMEASINDCSLQEIYQTKSDIMECNVEDCNSVLNVNEQIISSLLDLKRHITSALQKCEKKLIVIETSLQKHSGGDAKILICNAGIPYFKDRNYFFPPKNEDEILKENWKELQLRNLPKVCSWTIKERNVLLKAIKEEAIADVLRSQKTDCTTVDGLTVKSIIKVEEERKEDKTFPPTDFSEIVGPLEKKEFDWFKISSIHFDDIHSPLDCRVMWNVFLHPDINKNVWPKSEDVKLKEIVKKHKFQNWDKIAKDLSTNRTAYQCFIRYNTTKKLPKVQNYTWKSEEDERLLKLVDIFKIGDFIPWGEVANWIKNRTKQQVYFRWTYSLSPYLIKGRFTKAEDKLLKDAVIKYGTNFRKISAALMPNRSTVQLHDRYEILISNQIEKRKVWTFAEDSKLLDLFARFGPNWSRIAKAFSSKTRTQLRHRHTALQKYIKRGISLPELHRNQFPTINKTRNKQREEISYKDTLDQIMNPSNEHNDNNIDTELIKYFYTKQKATLVHKNKLYTTEQLSHDTKKLYSILQQLHAKLRIPDNIANIKLTDKDQQLLYSLKEYAKLKSDTEKRFQVIDECSLRMFGTNHDKREDSHFIPPPPSDSQIKLKSSKSVESKCIDYNLNTNDKFLVDKPAEMSTPDFVISHIGGHEQQLQFQKLNRLFQVTDVADKQSYLRNASIRPTKIFLLQQNNNNLTDRRDSSGNDKLTEIGTMVRSECNDTAISFERKSVDARRHVKLQSDYHRKSRMETVKKNYALFTMPEEIRYSSSTSETEITTEKDVSVIEATYATMLSFKNLIHLKRFNESYIGSNQFLTQQSYRFQEAIKLLETRLEQLFRYPIGLSKTALPEVYVIDTTENTNSNGKSSNVSKIKKLQTFDKSNKDVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01122991;
- 90% Identity
- iTF_01122991;
- 80% Identity
- -