Olig009589.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Osmia lignaria
Gene Symbol
Rel
Assembly
GCA_012274295.1
Location
NW:1316809-1323234[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.5e-43 3.1e-39 133.8 0.4 2 168 71 259 70 260 0.90

Sequence Information

Coding Sequence
ATGCCTGaagtatatgaaaattatatggttttagaaaatgtttctgaaaaccgtaATTTCTTTCCTTATGAATATGatTTGCAAACAATGAATGCTCAAAGTATGTGCAGTCCATTTAGTGAATCTCAAAGGACTTCCTCGATGTCACCATTaactgaaaatgaatttatgtCATTAAAGAATGCAACAGCTATTGGAGAACcacatttaataattctggAGCAGCCAATGGAAAAATTTAGATTTCGATATAAATCAGAAATGATAGGGACACATGGAAGTTTAGTAGGATCAAACAGTAACAGCAGTCGGAAAAAAAATGCACCAACAGTAcaattaaataatttcatggaGACTGCAATAATTAGATGCACATTAGTTACATCTGATGAAGGTCGAAGAATACCTCATGCACACAGATTAGTGTATAGAGATGGTGGTGTTGATTATGATGAACCATATCATGTTAAGGTGTCCCCTGAAACTGGCTATATTGTAGCATTTCACGGAATGGGAATTATACATACCGCAAAAAAACATGTCAGAGATGAACTTATTCGGAAGATGAGAATAGAAGctttagaaagaaataaaaggagtAATATAAAAGCTACTATTAGCACTCGAGAAGAAGCTCAAATCAAAGCTGATGCTGAATACTACCAAAAATGTATGAATTTGAACAGTGTCGCGTTATGTTTTCAAGCATTTATTGTGGATAATGATAACGTTATGAGACCAATAACAGAACCTGTTTATTCACATACCATCAATAATCTCAAAAGTGCATTGACTGGAGAACTTAAAATATGCAGAATTGATAAACACACCAGCTGTGTTGAAGGAAATGAAGAAGTGTTTATACTTGTAGAAAAAGTaggaaaaaaaaatattaaaataaaattttttgaacTAAACGAAAATGATTGTGAAGTTTGGTGCGCATACGGACGCTTTACGGAATTGGATGTTCATCATCAGTATGCTATTGTATTTCGaacgCCGGCATATAAAGATCTTAATATTACTTCACCAAAAGaagtttttattcaattagaaCGACCATCTGATGCAGAATGTTCTGAACcaataaaatttacttataAACCAAGTGACAGAATTATAGgcAAGAAGCGCCAACGAATGTCTTACTCCGGAAGTTCAGAATTGTCACACATAGTTCCAACTTATAACAGTCCCGTTGTAGATAATATATCAGAAATCTTAAGTGGCGATAGTCGGGATGTTTctagagaattaaaaaaattactttctgAAGGTTGTTCTTCGCCACTGCATAAAAATCTCTTTGAATGTATAGACTATGAACAATATTTACCATTTATTGAAAACGGTGATGAGAATATGTTGACTTCCGATGGTCCGCTAATTAGACAGCATCAAGATGATACAATGTTCCCCAAAAATATACTTACTGAAGTgataaaatgtatgaaaatgaattcagAAAATATGAAGGAATATATTCCAAAGCTGCTTAAAGATCGTTCTACCTATGGGGATTCCCCATTACACGCAGCTCTTCGGTACGGTCAACATGATATTGTTAAATACCTTCTAATGTTAATAAGTGCTGACAAAGATTGTAAGTCGCTTGTAAATGGACAGAATAGTTCGGGAAagACGCCATTACATTATGCTGTCTTACAAAACTTACCAGAAGTTACAAAAGCGTTACTCATGCTTGGAGCTGATCCAAATCGAATTGATGAGCATGGATTTTCTCCACTGCACGCTGCAGTGAGAATTCCAGAAGGTGGCGCCTGTGTTGATGCTTTATTGTCAGAGAAAACAGTTAACATTGAATTACCCAATGATGCTGGATGGAGAGCATTACATCTTGCTGCAGAAGCAGGATCGTACGATGCAGTATGTTTCCTTGTTCAAGCAGGAGCAAATGTAAACGATACCGAGATGTCTTATGGTAGGACAGCATTGCACATAGCTGTAGAAGGTggacataaaaatattgttgaatATTTGCTTAAAAagACAAATATAtctgtaaataaaagaaacttcaGTGGAAATACTGCTTTACATACTGCAGTTGTACATTCCGGAGCAAGAGCAAAAGAATTGTGTGCATTACTGATACGATATGGCGCTGATCCACATATTCAAAATCATAATCGGGAAACAgataatGTGGACAAAAGAAAAGGGCCTAGTATcaatataaaagaagaaatcgatTCGGAAGATGAAAATACAGAAGGAACTACTGGACAATCATCGTTTGATTTGGCCATGAACAAACCAGATATTTTGCAACTTTTTAATGGGAAGACCGAAGACACTGCGAACCAAATGTGTTCAGTTGCtacaaaattagaaatagaagATAAGAATTTACTTACAAATTGGTTAAACAATGAACACAAAGAAAAGTTATCTACTCTTTTAGACAAAACGCAAGGTTGGAGGAAACTTgcaaaacatttaaattttgaatattttttaaaaacttttgaaCAGAGTTCCTCAAGTCCgtctttacttttattaaattatattgacgTGCAGGCATCATTATCTTTAATAGATATGGAGAAATTGTTAAGAGATACCGGGGAAGAAGAAGCAGCAAATTATGTGCATGAAATTTCATCCACATATACGTAA
Protein Sequence
MPEVYENYMVLENVSENRNFFPYEYDLQTMNAQSMCSPFSESQRTSSMSPLTENEFMSLKNATAIGEPHLIILEQPMEKFRFRYKSEMIGTHGSLVGSNSNSSRKKNAPTVQLNNFMETAIIRCTLVTSDEGRRIPHAHRLVYRDGGVDYDEPYHVKVSPETGYIVAFHGMGIIHTAKKHVRDELIRKMRIEALERNKRSNIKATISTREEAQIKADAEYYQKCMNLNSVALCFQAFIVDNDNVMRPITEPVYSHTINNLKSALTGELKICRIDKHTSCVEGNEEVFILVEKVGKKNIKIKFFELNENDCEVWCAYGRFTELDVHHQYAIVFRTPAYKDLNITSPKEVFIQLERPSDAECSEPIKFTYKPSDRIIGKKRQRMSYSGSSELSHIVPTYNSPVVDNISEILSGDSRDVSRELKKLLSEGCSSPLHKNLFECIDYEQYLPFIENGDENMLTSDGPLIRQHQDDTMFPKNILTEVIKCMKMNSENMKEYIPKLLKDRSTYGDSPLHAALRYGQHDIVKYLLMLISADKDCKSLVNGQNSSGKTPLHYAVLQNLPEVTKALLMLGADPNRIDEHGFSPLHAAVRIPEGGACVDALLSEKTVNIELPNDAGWRALHLAAEAGSYDAVCFLVQAGANVNDTEMSYGRTALHIAVEGGHKNIVEYLLKKTNISVNKRNFSGNTALHTAVVHSGARAKELCALLIRYGADPHIQNHNRETDNVDKRKGPSINIKEEIDSEDENTEGTTGQSSFDLAMNKPDILQLFNGKTEDTANQMCSVATKLEIEDKNLLTNWLNNEHKEKLSTLLDKTQGWRKLAKHLNFEYFLKTFEQSSSSPSLLLLNYIDVQASLSLIDMEKLLRDTGEEEAANYVHEISSTYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00962281;
90% Identity
iTF_01122210;
80% Identity
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