Olig002132.1
Basic Information
- Insect
- Osmia lignaria
- Gene Symbol
- -
- Assembly
- GCA_012274295.1
- Location
- NW:96335-194114[-]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-08 0.00015 21.0 0.0 31 96 29 98 23 105 0.83
Sequence Information
- Coding Sequence
- ATGTGTCAGATTAATACGGATCCAATGAAAAGTCAAATCGGTTATCTGGAAGTTGTCGTTCCGCCAGACATTTTGGATTACCAGACAAGCACAGACATGGTGGTGCGAGAGGGTAGCAACGTGACCTTACGTTGCACTGCAACAGGATCACCGGAACCTAACATCGTCTGGAAACGCGAGGATGgtcaaaaaataattctggAGAACGGAACGAAAGTGTCGAGCGTCGGAGGAACAAACTTTAACATTAGCAAAGTAACTCGATTACACATGGGATCGTATCTTTGTATCGCGTCCAATGGAGTGCCACCCACGGTTAGCAAAAGGATTATGCTTATCGTTCATTTTCCTCCAATGATTTGGGTGCAAAATCAATTGGTTGGTGCCAGGGAGGGAGAGCAATTGACTTTGGAGTGCGACTCGGAAGCTTATCCCAAATCCATCAATTATTGGACAAGGGATAAGGACGAAATAGTTCCACAAGGAGGAAAATACGAACCTATTCTGCTGGATAACGCCTATAAAGTTCAGATGAAACTTACAATAAGTTCTGTCAGTCCATCTGATTTCGGAACGTACAAGTGTGTGTCCAGAAATTCATTAGGCGATACCGATGGCACCATTAAAGTTTATCCAAGAATATCAAATTCTAGTAATGGTAACATACAATACAAagGAAAGTTTCGACACAACTCGGGAAACGACATTTTCGAGGGAAATCAGGACATGCTAAAAGAGCGAGATTTGAAGCTGCGAGGTCGTAAAGAAACCAGCGGAAATGAAGGGGACGATTACGATGATTCTGGAGTGGCGACGGAAGAGAACTCTTTTAGCCTGATTTTCGCTTTGGTTACACTTATCATTTATTACCATCATCATCCTCAGTTAAGAACGCTCCATCcagcttga
- Protein Sequence
- MCQINTDPMKSQIGYLEVVVPPDILDYQTSTDMVVREGSNVTLRCTATGSPEPNIVWKREDGQKIILENGTKVSSVGGTNFNISKVTRLHMGSYLCIASNGVPPTVSKRIMLIVHFPPMIWVQNQLVGAREGEQLTLECDSEAYPKSINYWTRDKDEIVPQGGKYEPILLDNAYKVQMKLTISSVSPSDFGTYKCVSRNSLGDTDGTIKVYPRISNSSNGNIQYKGKFRHNSGNDIFEGNQDMLKERDLKLRGRKETSGNEGDDYDDSGVATEENSFSLIFALVTLIIYYHHHPQLRTLHPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -