Osur016484.1
Basic Information
- Insect
- Oryzaephilus surinamensis
- Gene Symbol
- dsx
- Assembly
- GCA_004796505.1
- Location
- SSSI01003132.1:6680-7424[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-23 8.8e-20 70.4 14.6 2 47 25 70 24 70 0.97 2 2 2.3 1.4e+04 -3.9 0.0 7 13 120 126 119 129 0.60
Sequence Information
- Coding Sequence
- atgtcCGAATCGCAAGATTACGAATCGAAAATGCATATGAATGCTTCGAGCACATCGTCGTCGCCACGGACGCCACCAAATTGTGCCCGTTGCCGAAATCATCGCAAAAAGATCGCCCTGAAAGGTCACAAACGGTACTGCATGTACAGAACATGTAAATGCCAGAAATGTCAATTGACCAGCGAACGGCAACGTGTTATGGCGATGCAAACGGCACTGAGACGGGCCCAGGCCCAGGATGAGGCGATGTTGAAAAATGGTAATACGGATCTGTTGTCGTCGATGCATCAACCAAAAAGTCCATCGCCGATAAATGTTGTCGATCGCAGTTTGGATTGTGATTCTTCCGCCTCGTCGCAATGTTCCAATCCGGCGGCGATTGTACGGAAAATTACACCGAATCCGGCTAGTGGCCCCGAGGTGACAAGTGCCAGTTTGGCAAGTGGATACACCGAATGTCATTCCAGTAATTATGGATATAAAGGTTAG
- Protein Sequence
- MSESQDYESKMHMNASSTSSSPRTPPNCARCRNHRKKIALKGHKRYCMYRTCKCQKCQLTSERQRVMAMQTALRRAQAQDEAMLKNGNTDLLSSMHQPKSPSPINVVDRSLDCDSSASSQCSNPAAIVRKITPNPASGPEVTSASLASGYTECHSSNYGYKG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01344939;
- 90% Identity
- -
- 80% Identity
- -