Osur014497.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oryzaephilus surinamensis
Gene Symbol
TFIP11
Assembly
GCA_004796505.1
Location
SSSI01010520.1:18196-21219[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-97 1.5e-93 313.4 13.6 1 275 392 663 392 663 0.98
2 2 0.2 1.8e+03 -1.7 0.1 243 270 676 703 667 709 0.58

Sequence Information

Coding Sequence
atgtgcgAAGAAGATAtggaaaaatttgaaataaccGATTACGACatagaaaatgaatttaatataaatagaaGTCGGAAGGGTTTAAGTAAACATCAACAAATATATGGTATATGGGCTGATGAGGAAGATGATGATTTACCAACTCAGCCAGCTTTTAAACCGAATCGCAGCATAAAAGCTAGTTACACAGCCCCAATTGGCTTTGTTGCTGGTGGTATACAGCAAGCTGGAAAAAAAGATAAAGAAAAGGAAGTGAAAAATGAGTCGGACGATGAACAGCCTACAACATCGTTCAAAACACGCAATAGTTCGAGTGAATCGGAGGAAGAATTACCCAGACAAGGTTTTGGTGCAAGAAAAATTGGTGGACAAGCTACGATGACGGAAATAACTGCAGATATAGCTGGTTTGCGTACAAAGTCGCATCAAACGTTCGTAAATCAAGGTGTTGGTCAATGGGAAAAACATACAAAGGGTATTGGGGCAAAATTGTTGCTACAAATGGGTTTTCAGCCAGGTAAAGGATTGGGTAAAGACCTGCAAGGTATCGCCACACCAGTGGAAGCACATTTACGGAAGGGACGAGGTGCAATTGGGGCTTATGGTCCGGAAAAAGCCGCCTCTATAGCCAAAGTCAAAAAAGACATAATTTCTGATGAAGATGAAGGACCAGAGGatgtaaaatggaaaaaaaagaatatttctaataaaaataaaacgcgATATTATTACCGGAGCGTTGATGATGTTATTGAGAAAGGAAAAAGGCCGGGAATGTTTAAGAATCTGGGAAATACAagTGAATTGAGTAAAGTTAAAGTAATCGATATGACTGGTCCACAACAACGTGTTTTAAGCGGCTATCACGCTCTAAGTGGCTTAAAAGCTCCACCTGGTGTTGAACATTTTGAGGACGTTGTCCATAAGAAGTGTTCGAATTTTCAATTACCAGAAATTCAACACAATTTAGATTTATTAGTTGACATGTGTGAACAAGATATTATTAGAATCGATAGAAATACTCGATTAAATcaagataaaataataaatttgaaacaagAAGAGAACAATGTTAAGAATAATCTTAGAAAAGAAGCAGAATTGGTGGACAATTTGAAGGAAGTGATGAATGCTGTTGACAAACTATTGGATCCATCACAAGGATATAGTTTGGGACAAATTGCGCAAATTTTTAGAGAATTACAACATGAACACTATGAGGAATACTGTAGATATGAGTTGGGCGAATTGGCACCAGGTCTAGTGGGTCCATTAATCACTTCAGCATTGGCGAATTGGTCACCATTGGTGACACCTCAACAATATTGCAACATATTCGAACAGTGGAAGGATATTCTCGATACAAAGAGACAACGTGGGACTCTAGAAGGTAATAATATGGGAATACAGCCGTATGATAGTCTCATATGGCATACTTGGATGCCTGTTATGAGATCTTGTGTTAGttcaTGGAATCCACGTGATTGTGATCCATTGATAACATTAATGGAAACATGGAAGCCGTTGTTGCCGCAATggattgttgaaaatattttcgatCAACTAGTGATGCCCAAATTACAATCGGAGGTGCAATCTTGGAATCCAGTTACCGATATGGTGCCCATACATACTTGGGTACATCCCTGGATACCATTAATAGATGAACGATTGCAAAATAGAATTTATCCACTAATTCAAGATAAATTAGGTACAGCCTTAACAAATTGGCATCCATCTGATAGATCAGCAAAACTAATGCTCAAACCATGGCAGCGTGCATTACCAAATGGTTCATTTGtagcatttttaataaaacatatcgTACCGAAATTACAATTGTGCATGCAATCGCTTATAATTAATCCACATGAACAGCATTTAGatGCTTGGAACTGGGTGATGGAATGGAACGATATGCTCTCAGTAGGCAATATGACATTGATATTAGATAAATTCTTTTTTCCACGATGGTTACAAACTTTGGCTGTTTGGTTAAATCACAATCCAAATTATACGCAAGTGACTGAATGGTATTCAGGATGGAAGAGGATGTTGCCAGAGGAATTATTATCACAACCAACGATTAAAGATAATTTTCATAAAGCATTGGAAATGATGAATCGTGCAGTGAATATTGGACAACAACCTGGTGCAAAAGAATCGATTTCGTATCTGACAAATATTGAAACGAATGCCCAACCACCACCTCCACCGCCCAGAGTTGAGAGTATTGCAGAAGCTGTACGTTCAGCATCGAAAATACCACAAGGTTTTAAAGATTTGGTAACGAAACGATGTGAAGAACGTGGAATTTTGTTTGTTCCTATACCAAATAAATTTCATGAAGCGAAACAAGTTTATAGAATTGGTGCAAATGGTGTACAATGTTATATTGATAGAAATGTTGTGTTTTATTCACAAAACAACTCTTCATGGATACCAACATCGTTGAATCGATTACTAGATATggcataa
Protein Sequence
MCEEDMEKFEITDYDIENEFNINRSRKGLSKHQQIYGIWADEEDDDLPTQPAFKPNRSIKASYTAPIGFVAGGIQQAGKKDKEKEVKNESDDEQPTTSFKTRNSSSESEEELPRQGFGARKIGGQATMTEITADIAGLRTKSHQTFVNQGVGQWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGIATPVEAHLRKGRGAIGAYGPEKAASIAKVKKDIISDEDEGPEDVKWKKKNISNKNKTRYYYRSVDDVIEKGKRPGMFKNLGNTSELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVVHKKCSNFQLPEIQHNLDLLVDMCEQDIIRIDRNTRLNQDKIINLKQEENNVKNNLRKEAELVDNLKEVMNAVDKLLDPSQGYSLGQIAQIFRELQHEHYEEYCRYELGELAPGLVGPLITSALANWSPLVTPQQYCNIFEQWKDILDTKRQRGTLEGNNMGIQPYDSLIWHTWMPVMRSCVSSWNPRDCDPLITLMETWKPLLPQWIVENIFDQLVMPKLQSEVQSWNPVTDMVPIHTWVHPWIPLIDERLQNRIYPLIQDKLGTALTNWHPSDRSAKLMLKPWQRALPNGSFVAFLIKHIVPKLQLCMQSLIINPHEQHLDAWNWVMEWNDMLSVGNMTLILDKFFFPRWLQTLAVWLNHNPNYTQVTEWYSGWKRMLPEELLSQPTIKDNFHKALEMMNRAVNIGQQPGAKESISYLTNIETNAQPPPPPPRVESIAEAVRSASKIPQGFKDLVTKRCEERGILFVPIPNKFHEAKQVYRIGANGVQCYIDRNVVFYSQNNSSWIPTSLNRLLDMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01344914;
90% Identity
-
80% Identity
-