Basic Information

Insect: Oryzaephilus surinamensis
Gene Symbol: clz9
Assembly: GCA_004796505.1
Location: SSSI01005876.1:936-3584[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.3e-13 2.2e-10 40.1 0.0 1 44 11 54 11 55 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.3e-13	2.2e-10	40.1	0.0	1	44	11	54	11	55	0.90

Sequence Information

Coding Sequence: ATGGAAAATAAGCAGAAAAGGCTTCAATATACCGAAGAATGCATGACCAAAGCAGTGGAAGCggttaaaaatggaaaaatgagtGCTTATAGGGCTCACAAAGAATATGGGGTTCCACGAACTACACTACTAGACAAAGTAAAAGGAAGAGTACCCGTAGAAAGAAAAATAGGTGCCGACACCGTACTCACTAAAGAAGAGGAAAATCTTCTTGTTAAATGGATATTCCACGTCTCCCAGTGTGGTTTTCCCATAACAAAACAGCAACTAATAGATAGCGTTCAGATCTTAGTCAAAAATTTAGAtagagaaaataattttaataatggaaGACCTGGCCGTAAATGGTATGAAGGATTCCTCAACCGTCATGCAGACGTAAGTACAAGAGTATCACAAAACTTAACAAATGCACGATCCAACGTAAGTGAAGATAAAATCAGAAGATGGTTTTTAGAAATAACCAATTATTTGATAGAACACAATTATTACGAAATAACAAATGATCCGAcacgtttatttaattgtgATGAAAcagcattttttttaagtccTAAAAATGACAaagttttagttaaaaaagGTGAAAAAGCTGTTTACACTTTCATTAACAATGATGAAAAAGAATGTCTGACAACCCTTGTAACATGTAGTGCTGATGGAAAAGTTCTTCCTCCAATGATAATctacaaatataaaagaattccAAAACATATAGCTGACAAAGTTCCCGATACTTGGGGCATTGGACGAAGTGAATCAGGGTGGATGACGGGAGAGAcgttttttgaatatttggCAAATGTTTTCAATCCCTGGCTATTTAGAAATAACATTCAGAAGCCTGTGATACTCTTCATGGATGGGCACACTTCTCATCTCACTATGGCATCAAGTGAATTTGCTTCTCAAAatggtataattttaatttctctGTTCCCAAATTCAACCCATATTTTACAGCCGTTGGACGTAGCGGTTTTTGGTCCATTAAAAGCACAATGGAGAAAAGTTATTTGTCAATGGcgaattgaaaataatggaAACCGTTTAAGTAGAGATATTTTTGcccaattattaaaaactacttTAGATAATATGAAACATTTGAgtgatattataaaaaatggatTTAGAACGTGTGGTCTTTTCCCGTTAAATCCcgataatataaattacaaaaaatattttaaaaatacaacatcAAATTctcaatcaataataaatgaacgagaaataaataaactagtagaatttttaaatttttttgaaaaagaaaattcacaTAAAATGGAGAAATTTAAATGTTCGGAAGAAACCTGGGACGGTCCTTTAGAAGACCTAAgcctttttcaattttggaaATCTTTAAAGAAACGTATTTCTGAAAGCAACATACACATAACTGCCGATAATCCGGAACCAGAATTACgtgaaaatattgatatttcAGGTTTAATTGACACAACTAATTTGCATTTAGATGTTGATAACCCATTGTTAGTAAATTCTGATCCAACCATCGAAAACGTAACAGAAGGAggaaattacaatataattataacagTACCTGAAATTAACTGTGATAAAAACCCTACATCAGATTTAAgtgtaaacaataatattaaccTAGTCAACACTGATATAGAATATTTAGGAAAGACCTGTGATATATCTACAAAAAAACAACCACATCCAAATAGACTATCATTAGATGATAAAAATCAATCAGTATTGGAAAAGGAATAcaattgtgataataaaaattccaatataaGTGAGACTGCCGATTCAGAAAACAGAGACATTGAAAACGACTTAAATTTAGAACACAATGACcaagaaaatatttgtgtaaatgttattgtttcaaaggaaaaaataaatgaagatCTTCAAGATTTTGAAGAATCATTACAtcaagaaaaagaagaaaatgaatACAGCCAAATTtcgaacaataataatgatatgAGTTTAAGTAGCAGCGAAACTAACAAAAATGAAGAAGAGAATGTGGAATATCAAATTAAAGAAACACCTCAAAAAAAGAATAACGATGAAGTGATACCTTCAccgtttaaaaaatctttattttggCCAGAACCACCAGTTGGtcaagaaaaaagaaaaactaaagaAAAAGTACCATCCGTGGCAACATCAAATGAATGGAAATtgtattatcaaaaaaaagaggacaaaaaaaaacaggaaatATTTCGCAAAGAAAATGCAAAACAAACACGTATTAAACGGAAACTGGAAcacgaaaaaacaaaaattgaaaaattaaaaagaagaaGGGCGAAAGagcaaaataattcattttctgaagaAGAAATAAGTGAAGATGATACAAATCAAAGTAaccaaacacaaaaaaataataatttcaaaaccAATGATTACGTAAtagtaaattataatgaacAGTTCCTTCCTGGTCAAATTAtagaaattgatttaaatgatccaataaaatacaaagttAATCACATGGAAAAAAAAGGCCTTAGTTGGATATGGCCCCAACGACAAGATATTTTCCAATATGACATcgatgaaattataaaaaaaattaaaaaaccagtattaaaaaacaaacgaGGTATCTATTCTGTTTCTGAATTATCTGagtatgaataa
Protein Sequence: MENKQKRLQYTEECMTKAVEAVKNGKMSAYRAHKEYGVPRTTLLDKVKGRVPVERKIGADTVLTKEEENLLVKWIFHVSQCGFPITKQQLIDSVQILVKNLDRENNFNNGRPGRKWYEGFLNRHADVSTRVSQNLTNARSNVSEDKIRRWFLEITNYLIEHNYYEITNDPTRLFNCDETAFFLSPKNDKVLVKKGEKAVYTFINNDEKECLTTLVTCSADGKVLPPMIIYKYKRIPKHIADKVPDTWGIGRSESGWMTGETFFEYLANVFNPWLFRNNIQKPVILFMDGHTSHLTMASSEFASQNGIILISLFPNSTHILQPLDVAVFGPLKAQWRKVICQWRIENNGNRLSRDIFAQLLKTTLDNMKHLSDIIKNGFRTCGLFPLNPDNINYKKYFKNTTSNSQSIINEREINKLVEFLNFFEKENSHKMEKFKCSEETWDGPLEDLSLFQFWKSLKKRISESNIHITADNPEPELRENIDISGLIDTTNLHLDVDNPLLVNSDPTIENVTEGGNYNIIITVPEINCDKNPTSDLSVNNNINLVNTDIEYLGKTCDISTKKQPHPNRLSLDDKNQSVLEKEYNCDNKNSNISETADSENRDIENDLNLEHNDQENICVNVIVSKEKINEDLQDFEESLHQEKEENEYSQISNNNNDMSLSSSETNKNEEENVEYQIKETPQKKNNDEVIPSPFKKSLFWPEPPVGQEKRKTKEKVPSVATSNEWKLYYQKKEDKKKQEIFRKENAKQTRIKRKLEHEKTKIEKLKRRRAKEQNNSFSEEEISEDDTNQSNQTQKNNNFKTNDYVIVNYNEQFLPGQIIEIDLNDPIKYKVNHMEKKGLSWIWPQRQDIFQYDIDEIIKKIKKPVLKNKRGIYSVSELSEYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01121576; iTF_01121517; iTF_01121518; iTF_01121520;
90% Identity: iTF_01121576; iTF_01121517; iTF_01121518; iTF_01121520;
80% Identity: iTF_01121576;