Osur005511.1
Basic Information
- Insect
- Oryzaephilus surinamensis
- Gene Symbol
- Rel_1
- Assembly
- GCA_004796505.1
- Location
- SSSI01007758.1:8936-12534[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-37 1.1e-33 116.7 0.6 2 168 61 251 60 252 0.91 2 2 2.8 1.3e+04 -4.0 0.0 44 64 332 352 327 357 0.78
Sequence Information
- Coding Sequence
- ATGAGTTATAGTATCCCCACACCACCTTCAAGCAATGGGGACTCTCCACGGTCCTTACAATATCCAACATCCCCAAATTTGGTTTATCCTCTTGGggataataattttcttgttaatCAAGccgaatttttaatatcagaCACTTTAATGGCACAAAACATTACGACTAGTCCtagtttacattttattgaagaACCAGTGGAAAAATTCCGTTTTCGATATAAATCGGAAATGGCTGGAACACATGGAAGTTTAACTGGTAAATCATACGATAAATCACGTAAACCAACTTATCCCACAGTAGAAttGAGAAACTGTAGTACGCCAGCAAAAATTCGTTGTTCAATTTATCAATGTGATGTTAAAGACAATGAAATTCGACCGCATGCTCATAAATTGATCATGAAGAAAGGAAAAGAAGAGTTTGAAGATCCGCATGAGATTGCAGTTTCCAAAGAAACCGATTTCAGAGCAATatTCCACAGTATGGGAATCATTCATACTGCTAAAAAATTCGTCTACGATGAATTactgaaaaagaaaatgaaactgTTCAAAGAACGTGTAGCACAAAATGAATATCAAAATCGCAGTTTAACAAACGatgaaattgaagaaattaaaGAACAAGCTTCAAATGAATCGAAAAccatcaatttaaatattgcttGTTTACGTTTCGATGCATTTATATATCAAAATGGCATTCCGCAACCGATTTGTCCGCCCTTGTATTCAAAcgcaattaataatttaaAGAGTGCATTAACTGGTGAATTGAAAATAGTCAGAATGGACCATTGTACTAGTCCTAGTAAAGGTGGACGTGAAATTTTCCTTCTAGTTGAACGTGTAACAAAAAaGAATATAAAAGTACGTTTCTTTGAAGTGGATGAAAATGATGAGGAAATTTGGGAAGCGTATGGAAAATTCAGTGATTTAGACGTACATCATCAGTATGCCATAGTTTTCAAAACACCACCATATCATAACATTAACATAAATGGACAAGTTAAAGTGAATATTGAACTTGTTCGGCCATCGGACAATGCAAAAAGTGAACCAAAAGAATTCACTTATATACCAACAAATGATTACAGGCCAGGAATGAAGCGTGCCCGCAATTTTTATAGTTATGACAGTTCAGATTTGGACAGTGATGAATTACCAACAACTCTGAACAGTTTTAAATTGACTGACAAAGAATTGATCCAAGAATTTAATATGAATAGCGACGAATTGGAACGTGCTATCCAATTGGCGGATTCGGAAGAATTTAATAAGCTTTTGAATGTGATTGAAAGTGATAATTCGTTGCACAAAGATTCACCATTAAAAGATCCTGACCGTGTGGTGGCACAATGTGGAGACGAAATAATCTTACCTCCACGTATATATTCAGAAATTAAAGTCGAACCAACCAGAATTCAAAATATCCCAATCAAAAACGTTCAAACGTTGACAAAACCAagaataatgaatttaaaaccGAACGAATATTATGAAGCATCGGAAgtattaaaagaattattgaaatttatgaaaactAATCCGACAATGAATCGCTGTATAGGCCTTTTAAAGGAATATTTTAGTGCTGATAACAAAacaaaCGCTTTGCACGTATTTATAGCGGAACGAGATGTAAACTCTGCacaaattctaataaaattcatgCAAAGATGTAATCAAACCCACTTATTGAATAttagaaattcatttaaagaAACACCGTTAATATTggctattataaattacaatgaagagattttaaatgaattgttgGCCATAAAAAGTGTTGATGTAACAATTCCAGATGGAAATTATAACACTCCGTTACATTTGGCAATTAAATGTCGTGCTccaatgaaattttttcaaatgttacTGGCCAAACCGAATGTTAAAGACTATATAGATGCAACAAATGCTGATGGTTATACGCCACTCGTACTTGCAATTTTGGAAGAAAACTCCCAGTTTGTGAGTATTTTGTGCAGACATAATGCAAATGTTAACTATAAAGACCCTAAAAATGGTTACACACCATTACGGTACGCTATAAAAGGCAATAATGTGTCAATTGTTGAATATCTATTGGAACAGAAAGATTTAAATCCatttattgttgattttaatCAAACGACTATTTTTCAAGCCGCTCAAGATGAAGCAAATGctgaaatttttaaagttgtCAATGATTACATGattgaaaatgaaattaaaatggaaattaaagaGGAAGTACCGGAATTAATGTCTGAAGAAGAAATGGagACGGAAGAGATCAAAGTTGAGCCACATATTTTGGAAGATTTATACGCGAACGTTGACAATTTTACTAATGAATGTTTAACGGAAGTTGCTAAATTGTTGGATGAAAGCGGAAATTGGGAAGATTTGGCCAATTTATTGGATTTAACACATTGTTTAAAATCCGGTATTATCAGCAGTAGTGGTAGTATTAGTCAGAATATTATAACTTACGCCGTAAAGTACAACGATGACACTGTGTTACAAATACGTAATTTTCTTGAAGTAATGGGAGAAAATAAAGCTGTTCAGTTAATTGATAACAtggttaaaaattataattaa
- Protein Sequence
- MSYSIPTPPSSNGDSPRSLQYPTSPNLVYPLGDNNFLVNQAEFLISDTLMAQNITTSPSLHFIEEPVEKFRFRYKSEMAGTHGSLTGKSYDKSRKPTYPTVELRNCSTPAKIRCSIYQCDVKDNEIRPHAHKLIMKKGKEEFEDPHEIAVSKETDFRAIFHSMGIIHTAKKFVYDELLKKKMKLFKERVAQNEYQNRSLTNDEIEEIKEQASNESKTINLNIACLRFDAFIYQNGIPQPICPPLYSNAINNLKSALTGELKIVRMDHCTSPSKGGREIFLLVERVTKKNIKVRFFEVDENDEEIWEAYGKFSDLDVHHQYAIVFKTPPYHNININGQVKVNIELVRPSDNAKSEPKEFTYIPTNDYRPGMKRARNFYSYDSSDLDSDELPTTLNSFKLTDKELIQEFNMNSDELERAIQLADSEEFNKLLNVIESDNSLHKDSPLKDPDRVVAQCGDEIILPPRIYSEIKVEPTRIQNIPIKNVQTLTKPRIMNLKPNEYYEASEVLKELLKFMKTNPTMNRCIGLLKEYFSADNKTNALHVFIAERDVNSAQILIKFMQRCNQTHLLNIRNSFKETPLILAIINYNEEILNELLAIKSVDVTIPDGNYNTPLHLAIKCRAPMKFFQMLLAKPNVKDYIDATNADGYTPLVLAILEENSQFVSILCRHNANVNYKDPKNGYTPLRYAIKGNNVSIVEYLLEQKDLNPFIVDFNQTTIFQAAQDEANAEIFKVVNDYMIENEIKMEIKEEVPELMSEEEMETEEIKVEPHILEDLYANVDNFTNECLTEVAKLLDESGNWEDLANLLDLTHCLKSGIISSSGSISQNIITYAVKYNDDTVLQIRNFLEVMGENKAVQLIDNMVKNYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -