Osur005920.1
Basic Information
- Insect
- Oryzaephilus surinamensis
- Gene Symbol
- TSC22D1
- Assembly
- GCA_004796505.1
- Location
- SSSI01006072.1:25555-28298[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.46 4.3e+03 -2.0 0.4 43 55 378 390 366 391 0.81 2 2 1.7e-27 1.5e-23 82.7 1.7 1 48 559 606 559 613 0.97
Sequence Information
- Coding Sequence
- ATGTTGCCAGGAAATGTTGATCCCCGCAGACCCGATAAAGTGCAACGATATGTTCCcaaaacaaacaacacaaATAATGGCCAAGAAGACCTTACAACAGATTATATGAATATCTTGGGTCAACATCCGACCACGGCAAATGCATCAGATGGCAGTGACAAACACGCAGACTCATCTGTGAGCACAGAAGCGAACACAAATCAAGTTCATGGCGCCCTCGAAGAGGTCCATCCAGTTGTGACTGATGATATAACATTAGCAGCCAATATGATACCCACGAGCTCTCAGTACGGTGTTGCCATAATACCAAATCCAGCACAACAAGAAGCCGATACGAACAGTACACCACCAACAGAAACTGTTACCGACGCCATAATGAAGCCATCAGATGATACAAAAGACTTAAATTCAACACCAAGCCGTAATGATCGTTTTAAAGTGGTGAAAATCGCCAGTTTGGAGCCGTTCAAACGCGGCCGTTGGAAATGTATGGATTATGTGGACGATACACCGCCTGTTACAAGTCAATCGAAAATTGGACAATCGCAGGGTAGCATCCAAGTGGCACCTGGtggtatttatttacaaacacaaAGTCTGCCACAACAACAAATCCAACAAATGTTGTTGCAAAGTGGCTTTACGAATGGTACGCCATTTTTTTCGAATGTGCCAGCCCAAATTGTCCAACCGGGTCAATATTTCTATCCACAAGTCAGTACATTACAAAATCAAACGTTACCATCACAACAACAAGTACCAACTAGTATGCCAATACAGTTTAATGCTGGCCAACCATATTTTCCAGGTGGTGTTATACAAAATGCCGGTTTCACAACAGTACCATCTGGTTATACGAATGTACAATATGTACCAGCAAATCTTGTACAAAATCAAAATAGTGCTTTTGTACCAACATCTCAACAAACTGTACAATTACCagcaaattttcaacaaagtCAAACTTATGCCGGCCAATCAACAGTTTCACAAACGAATGTACCATTAGTTAATGGTCATGCATATccccaacaacaacaacaacaacaaaatgaacCACAAAATACGACACCGGCTAGTTTGCCAAGTCAAACGGCGAAAagtgttattttaaataatagtcAACAGCCTGTTGTTAGccaaaatcaaataaatcaacaacagAATAGTGCAGTTCCAAATCAAATGGTTACTGTGGCTGGTAATAATCAGACACAAGCACCGGTACAAAATCAACCACCAcctcaacaacaacaacaacaacagcaacaaccgTATCAACAAAATACATTCCAACAAGTCAGTCAACAATCACAAAATCAGAATGCGAACAATCCAGTCCATGTGTCACCGAATTTGGCGTCAGTAGTGCAAGCGCCCACAATTATTCAAGTGTCTCAAGTAATGCCATCGCAAAATTTCGATCAAAATTTAGCAAATAACGTTTATACGAATCCACAATTTACAATGAGTGTAAATAGTTTAACAGTATTGGATAATAATGATGCATCATCGGAACAAATTAATGAATCAGGtggcggtggcggtggtgTAGGTGGTGCTGGtagtggtggcggtggtgttGGTGGTACAGAAACGGCTAGTGAGAGTACAGACGATGTAGCTAAAACGAATCCGGTAGTGAATgcaattgataataaaattgaacaagCTATGGATTTAGTAAAAAGTCATTTAATGTATACAGTACGTGAAGAAGTGGAAGTATTAAAAGAGAAAATCACTGAATTATTGGATAGGATACAACAATTAgagaatgaaaataattttctgcGGCAACAGATaccaaaaaatcaaaatataacgATACCGACTGCTGTGACGTCAACATCAAATACAACGTCACAAAATAGTTTGCCAATTACGAATCCTAGTGCGAATTTAAATACGCAAACTACAAGTGCACCACCTACATCGCCTAGTCCAAATCCAGTTACAAATACGGCCGTAAAGCCATCAAATGAGGCAAATACTCAACAATAG
- Protein Sequence
- MLPGNVDPRRPDKVQRYVPKTNNTNNGQEDLTTDYMNILGQHPTTANASDGSDKHADSSVSTEANTNQVHGALEEVHPVVTDDITLAANMIPTSSQYGVAIIPNPAQQEADTNSTPPTETVTDAIMKPSDDTKDLNSTPSRNDRFKVVKIASLEPFKRGRWKCMDYVDDTPPVTSQSKIGQSQGSIQVAPGGIYLQTQSLPQQQIQQMLLQSGFTNGTPFFSNVPAQIVQPGQYFYPQVSTLQNQTLPSQQQVPTSMPIQFNAGQPYFPGGVIQNAGFTTVPSGYTNVQYVPANLVQNQNSAFVPTSQQTVQLPANFQQSQTYAGQSTVSQTNVPLVNGHAYPQQQQQQQNEPQNTTPASLPSQTAKSVILNNSQQPVVSQNQINQQQNSAVPNQMVTVAGNNQTQAPVQNQPPPQQQQQQQQQPYQQNTFQQVSQQSQNQNANNPVHVSPNLASVVQAPTIIQVSQVMPSQNFDQNLANNVYTNPQFTMSVNSLTVLDNNDASSEQINESGGGGGGVGGAGSGGGGVGGTETASESTDDVAKTNPVVNAIDNKIEQAMDLVKSHLMYTVREEVEVLKEKITELLDRIQQLENENNFLRQQIPKNQNITIPTAVTSTSNTTSQNSLPITNPSANLNTQTTSAPPTSPSPNPVTNTAVKPSNEANTQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -