Obor005367.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oryctes borbonicus
Gene Symbol
nfxl1
Assembly
GCA_902654985.1
Location
LR736857.1:22556710-22567643[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 1.8e+04 -7.8 5.6 15 19 162 166 161 166 0.81
2 18 0.46 4.1e+03 -2.1 0.9 4 10 197 203 197 203 0.91
3 18 3.1e-08 0.00028 20.9 16.4 1 19 211 228 211 228 0.99
4 18 3.2e-05 0.29 11.2 15.7 1 19 264 282 264 282 0.95
5 18 2 1.8e+04 -4.4 2.3 6 10 307 311 306 311 0.89
6 18 1.3e-05 0.12 12.5 14.2 1 18 317 334 317 335 0.97
7 18 1.1 9.9e+03 -3.3 0.7 5 10 359 364 359 364 0.91
8 18 2e-05 0.18 11.9 12.5 1 18 370 387 370 388 0.98
9 18 0.36 3.3e+03 -1.7 0.3 1 5 397 401 397 401 0.95
10 18 0.0021 19 5.4 19.9 1 18 422 439 422 440 0.94
11 18 1.6e-10 1.4e-06 28.2 12.6 1 19 449 467 449 467 0.98
12 18 0.00012 1.1 9.3 5.6 10 19 516 525 513 525 0.89
13 18 0.11 1e+03 -0.1 8.5 1 12 535 545 528 545 0.85
14 18 2 1.8e+04 -6.9 4.5 14 18 573 577 573 577 0.86
15 18 1.4e-05 0.13 12.4 4.9 1 11 614 624 614 629 0.93
16 18 0.00012 1.1 9.4 15.8 3 19 655 671 654 671 0.94
17 18 1.6e-05 0.15 12.2 11.5 1 16 714 728 714 734 0.87
18 18 2 1.8e+04 -4.7 0.9 6 10 764 768 764 768 0.90

Sequence Information

Coding Sequence
ATGAGTGATTTTAGAAGGAGACAAGCAAAACCGAGGAATCCTTGGACCATAACACAACCCCAAAAATTGGATGGTAGTCAAAATGGGAGTCGAAGCTCTGACAGATTCACAGAAGCTTCGAAAAAACATCAGGCAGCTGCACAGAAATATGTTCTGGATTACGATTCATCTTCTGAAGAAGATGAATTAGAATCTGGAAATATTATTAagattattttgaaagaatatacatCTACCGGTGTcgaattgaataatttgaaaagaacaaaaggcTATCTTGAGGATGCGTTTGTATCGGGAGCTGCTACTTGTCTAATTTGCATATCTCACATCAAGCGTAATGATGCTaTATGGAATTGTAATGAATGTTActgtagttttcatttaatgtgCGTTCAGAGATGGTCAAAAGATACTATTTTTAATCAGAAGCAATTGTCTGAAGAACATAcacatgtaaaaaatataaagattggTTGGTGTTGTCCAAAATGCCGACAGGAATATACTCCAAATGACATTCCCACTGAATAtagatgtttttgtaaaaaggcTGTAAATCCAGCATATCAGTATTTACTAATACCTCATTCGTGTGGTAATACTTGTCGCAAGGAACTAAAACCAAAATGTGGTCATGAATGCATATTACTTTGTCATCCTGgTCCATGTCCACCTTGTCCAAAGATAGTTAATATTAGTTGTTATTGTGGCAGTCAACCTGCCAAACCTCAAAGATGCTCTAACAAGGAATGGTCATGCGGCTCTGTATGTAACAAATTACTAACTTGTAATAAGCACAAGTGTGCTCAACCTTGCCATCCAGACGAATGTGAACCATGCCCTAAAAAGAGCATACAAAAATGTCTATGCGGCTTAAACCAAAAGCTCAGAGATTGTGCTTCACCAATATGGCAGTGTGAGAAGaaatgcGACAAACCATTAACTTGCGGCCACCACTACTGCTTAAAATCTTGTCATTCCGAAGATTGCGGTCCATGTGAACTTTCAGAGCTTAGAACGTGCCCATGTGGTAAATCAACATATCAGTTACCATGTACAGAAGATACGCCCACATGCGACGACACTTGCGGCAAACTTCTAGAATGTGGCCAACATATTTGCAATCAGAAATGCCACAAGGATACATGTGGATCTTGTGTGGAAATTGTTGTAAAGTCTTGCCGGTGTGGACTTCATACTAAAGAAATTCAATGTAAGAAGCAATACTTATGTGAAACAAAGTGTAAACAGATGAAGGATTGCAATAAACATCCATGTAACCATAAGTGTTGCGATGGGAACTGCCCACCATGTGAGAAACCATGTGGGAAAACATTAAGCTGTGGAAATCATAAATGCGCATCTATATGTCATAGAGGCCCATGCTATCCGTGCCAGCTAACTGAAAATGTTTGCTGCCGTTGTAGTCAGACTTATCTGACAGTTCCTTGTGGAAGGAAATACAAAACGCGCCCGCCGAAATGTCTTAAGTCGTGTTTGATCCCACCGGAATGTCATCATCCAAGGCGCGAGAATCATCGTTGCCATTTTGGAGATTGTCCGCCTTGTCGACAAGTTTGTGGAAAAATACATGCCAAATGTTCACATCCTTGTCCGGCGTTATGTCATACTTCAGTCCTAGtaaaagtacaaacaaaaaagGCATCAATGCCTTGGGAGCAAGTAGCTcctattttagaaaagaaatcaCTTCCATGTCCCGATTGTGTTATGCCAGTGCGCGTAACTTGTTTAGgAGAACACGACAACACAGATTTGCCCTGTTACATAGCTAAACCTTCCAGTTGTGGCAGGCCGTGTGGAAGAATCCTAAAATGCGGCAATCATACTTGTCAAATAGAATGTCATGTTATTCAAGGACCGCACGACATTGTTCGCGCTGGAGATAACTGCGACATTTGCACTAATCCTTGCACTAATCTTCAACCAGACGGATGTAATCATCAGTGTCCTAAACTTTGTCATCCAGATAGTTGCCCACCCTGTACACAAATGATTCGAATTAGGTGCCACTGTGGATTGAATCAACCATATGTTGCTTGCAAAGATTGGACAAGCACTGAAGATAAAGAAAAGTTACAAAGCTGCGGTAATCAATGCCCAAATAATTATGAATGTGGCCACAGATGCCGTTCTAATTGTCACTCGGGTCCTTGTGTTAGTCAGGAAAGTTGTAAGAAAAGGGTTAAAATGACTTGCCCGTGCAAACGCCTCAAAAAGGAGTTCCTTTGCGAATTAGTACGACAAGGTTGTCCAATGATCGATTGCGATGAAACctgtaaacaaaagaaagtagAAGAAGAGAAGCTAAAACAATTGCAGCTTgagcaaaaaaagaaagaagaagagattaaaaatcaaaaagaattgGAGAAATACGAAAAGATGTTCCATGGCAAAAAGAAGAATAGAGAACGTAAAGTtcacgaagaagaagaagtaaaagGTTTTCTCTCCGAATATAAAATTCCTATCTATTTCGCTGTTTTTGGTATTCTTTCTGCTCTGATCTACGTTTATACTTACTAA
Protein Sequence
MSDFRRRQAKPRNPWTITQPQKLDGSQNGSRSSDRFTEASKKHQAAAQKYVLDYDSSSEEDELESGNIIKIILKEYTSTGVELNNLKRTKGYLEDAFVSGAATCLICISHIKRNDAIWNCNECYCSFHLMCVQRWSKDTIFNQKQLSEEHTHVKNIKIGWCCPKCRQEYTPNDIPTEYRCFCKKAVNPAYQYLLIPHSCGNTCRKELKPKCGHECILLCHPGPCPPCPKIVNISCYCGSQPAKPQRCSNKEWSCGSVCNKLLTCNKHKCAQPCHPDECEPCPKKSIQKCLCGLNQKLRDCASPIWQCEKKCDKPLTCGHHYCLKSCHSEDCGPCELSELRTCPCGKSTYQLPCTEDTPTCDDTCGKLLECGQHICNQKCHKDTCGSCVEIVVKSCRCGLHTKEIQCKKQYLCETKCKQMKDCNKHPCNHKCCDGNCPPCEKPCGKTLSCGNHKCASICHRGPCYPCQLTENVCCRCSQTYLTVPCGRKYKTRPPKCLKSCLIPPECHHPRRENHRCHFGDCPPCRQVCGKIHAKCSHPCPALCHTSVLVKVQTKKASMPWEQVAPILEKKSLPCPDCVMPVRVTCLGEHDNTDLPCYIAKPSSCGRPCGRILKCGNHTCQIECHVIQGPHDIVRAGDNCDICTNPCTNLQPDGCNHQCPKLCHPDSCPPCTQMIRIRCHCGLNQPYVACKDWTSTEDKEKLQSCGNQCPNNYECGHRCRSNCHSGPCVSQESCKKRVKMTCPCKRLKKEFLCELVRQGCPMIDCDETCKQKKVEEEKLKQLQLEQKKKEEEIKNQKELEKYEKMFHGKKKNRERKVHEEEEVKGFLSEYKIPIYFAVFGILSALIYVYTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00434531;
90% Identity
iTF_00627904;
80% Identity
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