Basic Information

Insect: Oryctes borbonicus
Gene Symbol: salm
Assembly: GCA_902654985.1
Location: LR736864.1:10200034-10208478[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.71 59 4.4 0.1 3 19 2 18 1 20 0.92

2 11 4e-06 0.00034 20.9 0.9 1 23 342 364 342 364 0.98

3 11 5.5e-06 0.00046 20.5 1.9 1 23 370 392 370 392 0.98

4 11 0.05 4.2 8.0 3.8 2 23 706 727 705 727 0.98

5 11 3.5e-08 2.9e-06 27.4 0.6 1 23 733 755 733 755 0.97

6 11 4.8e-05 0.0041 17.5 2.6 1 23 765 787 765 787 0.98

7 11 0.0073 0.62 10.7 2.4 2 23 1065 1086 1064 1086 0.97

8 11 0.032 2.7 8.6 0.7 1 14 1092 1105 1092 1106 0.92

9 11 5.5 4.6e+02 1.6 0.2 11 23 1157 1169 1153 1169 0.81

10 11 1.1e-06 9.4e-05 22.7 4.0 3 23 1316 1336 1314 1336 0.96

11 11 1.6e-07 1.3e-05 25.3 0.9 1 23 1342 1364 1342 1364 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.71	59	4.4	0.1	3	19	2	18	1	20	0.92
2	11	4e-06	0.00034	20.9	0.9	1	23	342	364	342	364	0.98
3	11	5.5e-06	0.00046	20.5	1.9	1	23	370	392	370	392	0.98
4	11	0.05	4.2	8.0	3.8	2	23	706	727	705	727	0.98
5	11	3.5e-08	2.9e-06	27.4	0.6	1	23	733	755	733	755	0.97
6	11	4.8e-05	0.0041	17.5	2.6	1	23	765	787	765	787	0.98
7	11	0.0073	0.62	10.7	2.4	2	23	1065	1086	1064	1086	0.97
8	11	0.032	2.7	8.6	0.7	1	14	1092	1105	1092	1106	0.92
9	11	5.5	4.6e+02	1.6	0.2	11	23	1157	1169	1153	1169	0.81
10	11	1.1e-06	9.4e-05	22.7	4.0	3	23	1316	1336	1314	1336	0.96
11	11	1.6e-07	1.3e-05	25.3	0.9	1	23	1342	1364	1342	1364	0.98

Sequence Information

Coding Sequence: ATGTGTCCGCGCTGCCAGGAGCAATTCACCGACGTACAAGAGTTCCTAACGCACAAGGCGGAATGCTCGATGAAAGCGAAAGAGCATGGCGAATCGGCGCACTCGGATCCCGAAGACATGGTCGTCTCGGAAGATGACGACGACGATGACGAGGATGACGAAACGGGAGGAAAACGCCTGGAGCGGATGCGAAGGCATCACCAAGATGCCGCCAACAATAACAGCGTCGAAGAGGAGGGATCTCCGGAAGAGGATACTGGCGGCGGTGGCGGTAGATTAGAAGGATTTCCGTTTCCGTTACCACCGGCGGCTACGGCGTCGGCTGCCGGTCACGTAACGCTGGAAGCGCTGCAAAATACGAAAGTTGCCGTGGCGCAGTTCGTCGCAACGACGATGGCGAACAACGCGGAAAACGAAGCAGCGTTTAAAGAGCTCGCCGTGCTGCAATCGACGTTATTCACGTTACAACACCAGCAAGTCCTTCAGTTGCAACTGATCAATCAATTGCAACAGCAGCTATCGATCAATCGGTCGAAAGCGAGTAGCCCTGCATCGATGACAAACGAAAATGAAACAGAACCGACCGCCGCTGAATCGCCGCCTCCATCGCAGGTTGACTCTAGAGAGCCGACGCCTTTATTACCGCCCCCTCCGAGTAATCAATCAATTACCGGTGTCGGTATTATTGAATCGTCACCGCAACAGATGCCGACGATTCTGTCTGAACCGTCGCCCTCGTCGGAGATAATCACTTCCACCGCCCCACTTCCGCCTCAAATCCAACCGCCGCTCTGTTCAATATCCGCATCGCTAGCATCGACGATCATAACGCATAATAATGAACCCCCACCGTCGCTAGACGAACCGAACACGCTGGAGATGTTGCAGAAGAGAGCGCAAGAAGTGCTCGACAACGCCAGCCAAGGTCTGCTGGCTACGAATTTAGCCGACGAACTGGCGTTCAGGAAAGGGAAGTCGCCGTCGCCGTACGATTCGAAAGGCCGAAACGAGCCGTTCTTCAAGCATCGCTGCCGTTACTGCGGGAAGGTGTTCGGTTCGGATTCCGCGCTTCAAATACATATCCGCTCGCATACGGGCGAACGACCCTACAAGTGTAACGTTTGCGGAAGCCGATTCACCACCAAAGGTAATCTTAAAGTTCATTTTCAACGGCACAGCGCGAAATTTCCCCATATCAAAATGAATCCCAATCCAGTTCCCGAGCATTTGGACAAATATCATCCGCCGTTACTGGCGCAACTCGGACAGCAATCGGCGTTGTCCCCGGGTGGTCCACCACCGCATCCTCCACATCTCGGATTCCCACCGACCCATCCTTTCCCGCCGACAACGATAGCGCTGTATCGACCGCCCGGTCCCCCACCTCCCGAATTGATAAACAGCCGGCTACAACCGTCGCCACATCGACCGCCCGAACCTTCCAGACTTTTTCCCTCTCATCAGCTATTCAACATTAAGCGAGAAGAACAGGAGATGCCGCAGAATCTCACGAAACCGATCCGATCACCGACGCCTACGCGAGAGAATCTCAACATCTCCGACAGTTCAGAGATCAAACAGGAAGCAAACGAGCAGGTTAAAAAAGAGATGACGGATCTCACGCCGAAACAGGAAATCGACACCGATAACGAGCAACAGGAACAGGAACCGGAGCGATTCTCTTCACCGGGACCGTATCACGACGAGTCGAGCATCGATAGTAGCAAGTTCAGTAACGAAGATATGCTCGGGCAAAGAAGTCCCGGCATGGAAAGGACGGAAAATATGCAAGACGAACCGGAAAATCTATCACAGAAGAGCAATCCGTTGACGGGACCGTTGAACGTGATCACGAGTCAAAGATTGTCGGCGAATTTTCCGTTTGGACACGCTTCGTCGCCTCCTAGTAGTACGTCGTCAGGCAGTTTAGGTCCGTTTTCTAGCACGCCCCTGGCCGATCCCTCTAAAGATCCCGCCATCTACACGAGCCTGTTACCTCGACCAGGCAGCAACGATAATTCGTGGGAATCGCTTATCGAAGTGACGAAAACGTCGGAGACGAGCAAACTTCAGCAACTGGTCGACAATATCGAGCACAAACTATCCGATCCGAACCAGTGCGTGATCTGCCATCGGGTGTTGTCCTGCAAAAGCGCGTTGCAAATGCACTACAGAACTCATACCGGCGAGCGTCCATTCAAATGCAAAATCTGCGGTAGGGCGTTCACCACCAAGGGTAACCTAAAGACGCACATGGGTGTCCATCGCGCCAAGCCGCCAATGCGCGTACTGCACCAGTGTCCCGTCTGCCATAAGAAGTTCACGAACGCTCTGGTCCTTCAGCAACATATCCGCTTGCATACGGGCGAACCGACAGATCTGACCCCGGAGCAGATACAGGCGGCGGAGGTGAAGGAATTCCCATCACCAGGCGCTTTTCCCCAATTGAATTCCATGAATCCATTCCTCAGTCAGAGCTTTCAGATGCCCGGTCTATCGTCGCTCGGTCCTGGCGGGTTTCCGCTGCACATGAAGTTGGATATGGATAGAGACGTCAAATCGGAACAAGATTATAtggacgacgacgacgacgatgaCGACGATATGAGCGCCTCGGATAATCCTTCGATCGCTTTCTCGACGTCCGCGTCGCCACCGGAACATCACCATATCGCGAACCTCGGCTTAAACGTGAGCACGAGCATGGCCATGGGTCTGTCTGGAACGGGGTTGAACTGTTCCGTAGAAGATTTCTGTCATAACAGCGGCGCAGGTAGCAGAAATTTGCCGCCAATATCTCCCATGCAAAATGGCGAAAAATCGCCCACGCAGTCCGGAATTACGAGTCCGGGAAGCGTCGACGTCCGATCATCTCCGAATCAAATATCAGCAACCGTCCAGGTACCACGCCCTCCATCCTCTCAAAGGGTCAGTAGCCCTACGCCGTCGGAATCCAACTCGCTAGGCGCCTTGGACCTCACGCCGAAGACGTCGCAACCGCCCATATCCAGTCCGGGACCGCCTGTTCCCGGACCACCGTCGTTATTTTCGTCCTTCGGCCTCTTACCCCCCGCTCAGGGTAGTTCGCCGCTGATGACGTCCGCGCTCTCCTCATTGACGTCATCAGTGCTGACGTCGACAAGCTTCAGCCCCTTGCGGTTAGCCGTCGGTCCAGCGGTTAGAGGAAACACCACCTGCAATCTTTGCTTCAAGACATTCGCTTGCAATTCCGCCTTGGAGATCCACTACAGGAGTCATACGAAAGAGAGGCCGTTTAAATGTACCGTTTGCGATAGAGGATTCTCGACGAAGGCAGATGAGGACTGCGTATGCGGTCAGAGGCGTATCCAGGACGAAGCGGAGCGGAAAAGAAAGCAGCCGCAACGCAAGAAAATCCCTTCGGTTTTTCCATTGCCGATGAGCCCTGGATACGCCACTACTGCCAATTCTCACCAACAGAGGAGCAGCTCGCTCGCGGGGAACATGAAGCAGCACATGCTCACGCATAAGATCAGAGACATGCCGCAGCACATGTTCGACAAACCGCCGATCGGAGGAGAGGGAAGCGAACCGCTTAATAACCAAACCGGCATGCTCGGCCAATCCCAACACCACCACCAGACAAATTCGCAAGTCAATCAACCTCCATCGCAACCCCATACGCCGCAACAACAACCATCACCCCAGCACCAGCACCAGCAGCAGCCTCCACCGCCACCCCCTCCGCCTTTACTGCAGCAAACGCTACCGCCTCAATCGCAACAACTCCCGCCGAAAGAGATCAAATCCGAACAAGATCTGCCGTCTACACGCCTTCCTCAGCCTCCTCAAATGTTGTCCCAAACGCAGGACGGTAACGGAGTTGAACCAGTGAAAAGGGCGCCCACGGAAAACGACCTGCCGCTACCCAAAAGACCGCCAAGCTTGCAGGCCAGTAAACACTTGTGCCACGTATGCAATAAGAACTTCTCGTCCAGCTCGGCCTTGCAGATACACATGCGGACACACACGGGTGATAAGCCATTCCGATGCACCGTTTGTCAAAAGGCCTTCACCACCAAAGGAAATCTCAAGGTTCACATGGGCACGCATATGTGGAGCAACGGGGCGTCACGACGCGGTCGACGCATGTCACTAGATCTGCCGCCCATTCCCATGACGCCCAAGGATTCCGAATTTCTGCAACGGAGGCCCGATCTCTTCTACCCGTACCTCCCGGCTCCATTCCTTAACGGCATGCAACAAAAGctAAACGAGATCTCAGTGGTTCAAAATCCGCAGAATGGTCTCGCGACACCCGGCGGCAAATACAACCTACTCGGTTTCGGCTATCCGCCACCAGAGGTGCTGAGATCGCAGGCGAATTCTCCGGAACGGCCGCCGTCGAGACCGCCGAGCCGCGAACCATCGGACCGTCTCTGGGACCTGCATTTCGACCGAAAAGCAAACAGCGAACCGCCCAGGGACGAACTTCTGCCGCCGAGCAGGGAAGGGCTGGCCGCCTGA
Protein Sequence: MCPRCQEQFTDVQEFLTHKAECSMKAKEHGESAHSDPEDMVVSEDDDDDDEDDETGGKRLERMRRHHQDAANNNSVEEEGSPEEDTGGGGGRLEGFPFPLPPAATASAAGHVTLEALQNTKVAVAQFVATTMANNAENEAAFKELAVLQSTLFTLQHQQVLQLQLINQLQQQLSINRSKASSPASMTNENETEPTAAESPPPSQVDSREPTPLLPPPPSNQSITGVGIIESSPQQMPTILSEPSPSSEIITSTAPLPPQIQPPLCSISASLASTIITHNNEPPPSLDEPNTLEMLQKRAQEVLDNASQGLLATNLADELAFRKGKSPSPYDSKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPYKCNVCGSRFTTKGNLKVHFQRHSAKFPHIKMNPNPVPEHLDKYHPPLLAQLGQQSALSPGGPPPHPPHLGFPPTHPFPPTTIALYRPPGPPPPELINSRLQPSPHRPPEPSRLFPSHQLFNIKREEQEMPQNLTKPIRSPTPTRENLNISDSSEIKQEANEQVKKEMTDLTPKQEIDTDNEQQEQEPERFSSPGPYHDESSIDSSKFSNEDMLGQRSPGMERTENMQDEPENLSQKSNPLTGPLNVITSQRLSANFPFGHASSPPSSTSSGSLGPFSSTPLADPSKDPAIYTSLLPRPGSNDNSWESLIEVTKTSETSKLQQLVDNIEHKLSDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVKEFPSPGAFPQLNSMNPFLSQSFQMPGLSSLGPGGFPLHMKLDMDRDVKSEQDYMDDDDDDDDDMSASDNPSIAFSTSASPPEHHHIANLGLNVSTSMAMGLSGTGLNCSVEDFCHNSGAGSRNLPPISPMQNGEKSPTQSGITSPGSVDVRSSPNQISATVQVPRPPSSQRVSSPTPSESNSLGALDLTPKTSQPPISSPGPPVPGPPSLFSSFGLLPPAQGSSPLMTSALSSLTSSVLTSTSFSPLRLAVGPAVRGNTTCNLCFKTFACNSALEIHYRSHTKERPFKCTVCDRGFSTKADEDCVCGQRRIQDEAERKRKQPQRKKIPSVFPLPMSPGYATTANSHQQRSSSLAGNMKQHMLTHKIRDMPQHMFDKPPIGGEGSEPLNNQTGMLGQSQHHHQTNSQVNQPPSQPHTPQQQPSPQHQHQQQPPPPPPPPLLQQTLPPQSQQLPPKEIKSEQDLPSTRLPQPPQMLSQTQDGNGVEPVKRAPTENDLPLPKRPPSLQASKHLCHVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWSNGASRRGRRMSLDLPPIPMTPKDSEFLQRRPDLFYPYLPAPFLNGMQQKLNEISVVQNPQNGLATPGGKYNLLGFGYPPPEVLRSQANSPERPPSRPPSREPSDRLWDLHFDRKANSEPPRDELLPPSREGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00070639;
90% Identity: iTF_01499119;
80% Identity: -