Basic Information

Insect: Oryctes borbonicus
Gene Symbol: -
Assembly: GCA_902654985.1
Location: LR736870.1:7392435-7450468[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.68 57 4.5 1.9 2 23 333 353 332 353 0.94

2 25 2.5e-05 0.0021 18.4 0.2 1 23 355 377 355 377 0.99

3 25 0.04 3.4 8.3 0.2 1 23 382 404 382 404 0.97

4 25 0.34 29 5.4 0.3 1 23 408 431 408 431 0.94

5 25 0.0041 0.34 11.5 0.1 2 23 438 459 438 459 0.96

6 25 0.00078 0.066 13.7 1.8 1 23 465 488 465 488 0.95

7 25 0.00025 0.021 15.3 1.2 1 20 499 518 499 519 0.96

8 25 0.00043 0.036 14.5 1.8 2 23 618 640 617 640 0.94

9 25 2.4 2e+02 2.8 2.9 1 23 660 682 660 682 0.98

10 25 0.029 2.4 8.8 2.9 1 23 685 707 685 707 0.97

11 25 0.00061 0.051 14.1 0.4 1 23 712 735 712 735 0.98

12 25 5.1e-06 0.00042 20.6 0.1 1 23 741 763 741 763 0.97

13 25 0.013 1.1 9.9 0.9 1 23 769 792 769 792 0.94

14 25 0.00014 0.012 16.1 0.3 2 23 804 825 803 825 0.97

15 25 0.011 0.96 10.0 0.1 3 16 837 850 835 852 0.89

16 25 0.0033 0.28 11.7 0.7 1 21 1025 1045 1025 1048 0.89

17 25 0.0015 0.13 12.8 1.0 1 23 1053 1076 1053 1076 0.94

18 25 0.0067 0.56 10.8 0.6 1 23 1084 1106 1084 1106 0.98

19 25 9e-05 0.0076 16.7 0.1 2 23 1113 1134 1112 1134 0.96

20 25 0.0081 0.68 10.5 0.9 1 23 1140 1163 1140 1163 0.95

21 25 2.7e-05 0.0022 18.3 3.6 2 23 1175 1196 1175 1196 0.97

22 25 0.00035 0.029 14.8 1.4 3 23 1204 1224 1203 1224 0.98

23 25 3.8e-05 0.0032 17.8 3.6 1 23 1230 1252 1230 1252 0.98

24 25 8.9e-06 0.00075 19.8 1.9 1 23 1258 1280 1258 1280 0.98

25 25 0.0011 0.091 13.3 0.0 1 22 1286 1307 1286 1307 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.68	57	4.5	1.9	2	23	333	353	332	353	0.94
2	25	2.5e-05	0.0021	18.4	0.2	1	23	355	377	355	377	0.99
3	25	0.04	3.4	8.3	0.2	1	23	382	404	382	404	0.97
4	25	0.34	29	5.4	0.3	1	23	408	431	408	431	0.94
5	25	0.0041	0.34	11.5	0.1	2	23	438	459	438	459	0.96
6	25	0.00078	0.066	13.7	1.8	1	23	465	488	465	488	0.95
7	25	0.00025	0.021	15.3	1.2	1	20	499	518	499	519	0.96
8	25	0.00043	0.036	14.5	1.8	2	23	618	640	617	640	0.94
9	25	2.4	2e+02	2.8	2.9	1	23	660	682	660	682	0.98
10	25	0.029	2.4	8.8	2.9	1	23	685	707	685	707	0.97
11	25	0.00061	0.051	14.1	0.4	1	23	712	735	712	735	0.98
12	25	5.1e-06	0.00042	20.6	0.1	1	23	741	763	741	763	0.97
13	25	0.013	1.1	9.9	0.9	1	23	769	792	769	792	0.94
14	25	0.00014	0.012	16.1	0.3	2	23	804	825	803	825	0.97
15	25	0.011	0.96	10.0	0.1	3	16	837	850	835	852	0.89
16	25	0.0033	0.28	11.7	0.7	1	21	1025	1045	1025	1048	0.89
17	25	0.0015	0.13	12.8	1.0	1	23	1053	1076	1053	1076	0.94
18	25	0.0067	0.56	10.8	0.6	1	23	1084	1106	1084	1106	0.98
19	25	9e-05	0.0076	16.7	0.1	2	23	1113	1134	1112	1134	0.96
20	25	0.0081	0.68	10.5	0.9	1	23	1140	1163	1140	1163	0.95
21	25	2.7e-05	0.0022	18.3	3.6	2	23	1175	1196	1175	1196	0.97
22	25	0.00035	0.029	14.8	1.4	3	23	1204	1224	1203	1224	0.98
23	25	3.8e-05	0.0032	17.8	3.6	1	23	1230	1252	1230	1252	0.98
24	25	8.9e-06	0.00075	19.8	1.9	1	23	1258	1280	1258	1280	0.98
25	25	0.0011	0.091	13.3	0.0	1	22	1286	1307	1286	1307	0.97

Sequence Information

Coding Sequence: ATGGTGAGCATAATGGAAATTATGCAATTGTGTCGACTGTGTCTGGTCAAGGAACAAGTGAACGTGCCGATTTTCGACGAACAGGGCGATATTAGGCAGATATGCTTGAAAATCTCGGCTTGTTTGCCGGTCAAGGTTTCAAAAGAAGACAAACTACCCAAAAAAATTTGTGATGGTTGCCTGTACAAGCTAGAATTACTTTACCAATTTTACAATACGACCGCTAACGCGGAGAAGCAACTATTATCCTGGATCGAGCAAGCTAAAATGGATTCGAAGAACGCAGCAGGTGAATTAACGACGCAACCGCAAGCAACCGTTAAACAAGAGAAACTCGAACCTGTCGAAAGTACAAACGAAACCCCGGAACTATCAAGCGAAGCGCAGAGTTACATTCTACAACAGCAACAATTACAGTATCAATCGgattttccatttaaagaatCTCAGGGTTCGAACGCAGATGGAAGCGCATCGAATACATCTGCGAATTCCGATGAACCAATAGCGAAAAGACCAAGACGAAGGCGACAAGCCACGAAGCCTATACCACCTGAGGCGATAGAATCCAGTGATGATAACGATGCTGGAGATTCTCTGATGGAAATGACTGTAACCAAGACTGAAGAAGAAAGCGAGAGCGACGGTGATGATAACGCTGATGACCCGGAACCCGACAAATATGTGGCCGTTGGCGACGATACCGACCAACCAGGACCCTCCGGACTTGGCAAAGGGAACACAGACACACCgttaacttttaaaaatttcggaCAATTGGCGGTCTTCGTAATCGAAGATGAGACATCAGACCATGAGGAAGATGTTAACCTAAACCCTTTTCAATCAGAGGATTTCGACCTGTTAGAGCGGGACGATGTGATGATCATCCAAACCGACGCATTCAACGATGAAGGTTTTACGAATAGCGAAGAGGAGAATCGGGTCGAGCAACCGAAATTGTTGAAAAGGAATGCTTCCAGGGAACAAAGTATCGTTTGTTCCGAATGTGGGAAATTGGTTAGGTACAAACATTATGACAAGCATACCAAGTCTCATACGTATAAGTGCCAACAGTGTCCTGAGACTTTTGGGACCCAAAGGGCGTACGAAGCACACATAAAGGTCCATAGCAATAATTCTTTTACGTGTTCCATTTGTAGTATAGATTTTGGGAGCGCCGAGGCATTTTCTATCCATAACCAGAAGCATTCCGGCTCCTTCAAATGCCCTTTATGCCCGTTCGAGACCGGTACAAAGACTTCCATGAAACCTCATATCAAGCTAATGCATATGAAAGAGTACAAAAGGGTGTGCGAGATCTGCGGGAAAGGCTTCCTAAATAACGCTACCTACACCGACCATATGACTCTCCATTCAGGcgagaaaaaatacaaatgtgaATACTGTGATAAGAAATTCGTCCTTAACAGATACTTGGATATCCATAAAAAGTTGAACCATAAAGACATCATAAACGGCGTCGAAGAATACTATTCTTGTCACGTTTGCAACCGGGCCTTCAAGTTCGAGAAAAGCCTCATCAGGCACCTGAGCTGCATCCACGACATTGGCgTCAggataatagaaaaatacagtTACACAAATACGATGTTTTTTGAATCAAACTCTATTCTTGCCAAAAGCGATGTGAACCTGACTTTGGCTAATACCACTTGCAGAGCCACAAATGCCGTAATGGTTAGTGCAATCTCCGATATTTCTGCACGgtaCGAACTAAAGTACTCGGATATCATGTCAAAGGTTAAGGTAGAGCTAAACGATAGGATATCGTCTAAGGGCAGGCCGTTCAAGAGCAAAACGAAATCCAATTGTCCCGATAAGAAGTGGCCGTGCAAGAAGTGCAGCGAACGTTTCTCGACGGTCCGCCAGTTGAGGAAGCACCGGAAAGAGACGCATCGAAGGAACGTCAATATTAACCGCTATAATTTCTCCTACAATCAGCCGGAGGGCATCTATTCCTGCAATAATTGCGCGAAGAAGTCGAGATGCCAAAAAGAAATGGAGGATCACGTCCAAACTCATGAGCCGTACGTGTGTTCGATCTGCGATTGCGAATTCTATTCCCTGTACAAATTCTCTGTGCATAATCAAAGTCACGATTCCACGCATTTCAAATGCCCCCTGTGCGATTACCAAACGGCGAGGAAGACGGCGATTTTGCGACATATAAACACGAaccacttaaataaatatatttacaattgcaaTATCTGCGGTAAAGGCTTCGAAGACGCTGCGAACTTTAGAGACCATCAGAACGGCCACGCTGGGGCTAAAGCCTTTTCGTGCATAGTTTGCCAGAAAGAGTTCCCATTTAATAGATACCTTCTAGCGCATCAAAAGAGGAATCACATGGTCACAATCGACGGGGTCCTCTTACCAAACCAATGCGGCGTTTGCAAGAGAATCCTATCAAAACcttcaaatttagaaaagcaTATGATACAGCATGACGCGGCTTTCCTTCAAGCGACGCATCACCTTTGCGACATCTGCGGGAAGGGTTTCGCTAGGAAAGATAAGCTACTAATAAGCGAGAGAAAACAAATCAGCCTGTttgcaaagaaagaaatcatttttgttcAAATGTTAAATTCTATTGTTCAGAGTTCAAGCACCCAAGTCTTCCAAGAACCTCTTTTACTTATTAGAACGTGCCATAGACCGCTGAAGTTAACCCTAAAGAAAACCTCAAAAGACTCAAAAACTGTAAATTGGAACAAAAAACTACCCGAAATCGATATTATTCCCGTCGAAAAGGTAAAATTAGAGCCCAACTTTAAGCCGAACGAAGATTTCGACGAGTTAGAAATCACCAGGAAACCCTTTCCGCCAATCGGCTACGTGAATCCGTTCAATTACTCGAATTTAAAAGCGAAAAATCTGCCGCGAAAATCGAAGCAACCGGAATACACCAACCGGAAGTGGACGTGCATCATTTGCGGTGATATAGCAGCCAGTAAAGAAGCCTTAATAGATCACTACGAGATCCATAGGATCAACAAGGAGACCAAGGTTATGGAGACCTTCGCTAATGATACCGAGTACTTTAATTGCGCCATCTGCGGCCAGGAGTTTACATCGTTGAAGACTTACGAAAGACATTTCGATGCTAAACACGGCGAAAGGAATTACACTTGCTTCGTCTGTCAGAAAGTCTACAAGGATGCTTTCCAATTGGCAATTCACAATTATACTTTCCATCCTGAGGATTACGATTACGCCTATCAGTGTGTCTTGTGCGATTTTAAGACGGCCTTTAGGGGTAATTTGAAGGACCATCTCCTCCAACATGAAGCTTCTTGCAAGCTTAAATGCGAAATCTGCGGGAAGGGCTTTGAAAACGAGGCCAATTACGAGGAGCACAAGAGTATGCACGGTAGCACGGCTTCGTTTTCATGCGATGTTTGCGGCGACACCTTCCCGTACACGCAACACCTAATAAATCACAAAAAGGAGGTTCACCCGGAGATCTTCGGAGATAACCTCAACCAAAACGAGTGTCACATTTGCAATAAGAAGTTCGCCCATAAGAAGAGTCTAATCCTCCACATCCGAGGGCATACGGGCGAGGACTCGGTGCTTTGTGATATGTGTGGTAAACGCTTGACTAGCGGCGAACACCTCAAACAACATCTGAGGATCCATACAGGGTTTAAACCTCATAAGTGCTCGGTCTGCGGTAAAGGATTCGCTAAGAAATGTAACCTAACCTTGCACGAGAGAGTTCATAGCGGGGAGAAACCCTATAAGTGCAGGGTTTGTTCGAAATCTTTCTCGCAACGTTCCACGTTGGTGATCCATGAGAGATATCATAGCGGTGAACGTCCGTACGTCTGCACCCTCTGCAACAAGGGCTTCGTAGCCAAAGGATTGCTGAGTGTTCACATTAAAACGTGCAGTGCGATCCCTGAAGATTATCTAGTTGCTTAA
Protein Sequence: MVSIMEIMQLCRLCLVKEQVNVPIFDEQGDIRQICLKISACLPVKVSKEDKLPKKICDGCLYKLELLYQFYNTTANAEKQLLSWIEQAKMDSKNAAGELTTQPQATVKQEKLEPVESTNETPELSSEAQSYILQQQQLQYQSDFPFKESQGSNADGSASNTSANSDEPIAKRPRRRRQATKPIPPEAIESSDDNDAGDSLMEMTVTKTEEESESDGDDNADDPEPDKYVAVGDDTDQPGPSGLGKGNTDTPLTFKNFGQLAVFVIEDETSDHEEDVNLNPFQSEDFDLLERDDVMIIQTDAFNDEGFTNSEEENRVEQPKLLKRNASREQSIVCSECGKLVRYKHYDKHTKSHTYKCQQCPETFGTQRAYEAHIKVHSNNSFTCSICSIDFGSAEAFSIHNQKHSGSFKCPLCPFETGTKTSMKPHIKLMHMKEYKRVCEICGKGFLNNATYTDHMTLHSGEKKYKCEYCDKKFVLNRYLDIHKKLNHKDIINGVEEYYSCHVCNRAFKFEKSLIRHLSCIHDIGVRIIEKYSYTNTMFFESNSILAKSDVNLTLANTTCRATNAVMVSAISDISARYELKYSDIMSKVKVELNDRISSKGRPFKSKTKSNCPDKKWPCKKCSERFSTVRQLRKHRKETHRRNVNINRYNFSYNQPEGIYSCNNCAKKSRCQKEMEDHVQTHEPYVCSICDCEFYSLYKFSVHNQSHDSTHFKCPLCDYQTARKTAILRHINTNHLNKYIYNCNICGKGFEDAANFRDHQNGHAGAKAFSCIVCQKEFPFNRYLLAHQKRNHMVTIDGVLLPNQCGVCKRILSKPSNLEKHMIQHDAAFLQATHHLCDICGKGFARKDKLLISERKQISLFAKKEIIFVQMLNSIVQSSSTQVFQEPLLLIRTCHRPLKLTLKKTSKDSKTVNWNKKLPEIDIIPVEKVKLEPNFKPNEDFDELEITRKPFPPIGYVNPFNYSNLKAKNLPRKSKQPEYTNRKWTCIICGDIAASKEALIDHYEIHRINKETKVMETFANDTEYFNCAICGQEFTSLKTYERHFDAKHGERNYTCFVCQKVYKDAFQLAIHNYTFHPEDYDYAYQCVLCDFKTAFRGNLKDHLLQHEASCKLKCEICGKGFENEANYEEHKSMHGSTASFSCDVCGDTFPYTQHLINHKKEVHPEIFGDNLNQNECHICNKKFAHKKSLILHIRGHTGEDSVLCDMCGKRLTSGEHLKQHLRIHTGFKPHKCSVCGKGFAKKCNLTLHERVHSGEKPYKCRVCSKSFSQRSTLVIHERYHSGERPYVCTLCNKGFVAKGLLSVHIKTCSAIPEDYLVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00627433;
90% Identity: -
80% Identity: -