Obor003421.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oryctes borbonicus
Gene Symbol
Hr39
Assembly
GCA_902654985.1
Location
LR736872.1:1507664-1569140[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.21 3.8e+03 -3.1 8.0 69 188 150 283 118 333 0.44
2 4 8.8e-09 0.00016 21.2 0.1 1 27 417 443 417 484 0.73
3 4 0.0049 89 2.3 0.0 76 119 463 506 436 533 0.65
4 4 3.7e-74 6.6e-70 236.6 0.1 204 408 544 743 487 743 0.93

Sequence Information

Coding Sequence
ATGGCCACTGACATGAGGTCGCCTAACGTTTCCGTCACCCCCATCAATATGGAGCCGTACCCACCGGCTCCCCTCACTGCTCTCACCAATGGCGATCGCCGTTCGTCGCTTCAAGGACATACGCACACAACCATCATCGCATCCAGTGGCAGTGGTTCCGGTTCCAGCGCCTCAAACGAACCACCACTGGATCCATCAGATGCTGAAGTTGCGCAGATCGACTTCCAGTCAACACATGTTAATATGCGATCAAAGAAAACGAAGAGAGGTGGCAGTGGAGTAATAGATAATAGTTCAATCGACTTACTACCGCGACCGATGTCGTGGGAGGGTGAATTGTCTGATTGCGAGAGGGATCATATGTGTATCGACGACGATCATTCATCACAGGTACCCGAAAACCTATCTTTATCACTGAATAAACACACTCAAGCGAACCTCCATGATTCCAAGGAAAGCCCGATCATGCGATTGAGTCAAGCGCCAGTCGTCAGCAGTTATTCGTTACACAGCACTCCCAGTAATTCCCCTCTGCTCAGCCAACGTCAGTCAACGACCGTCACGAACGTTCCAATACTAGGTCACAAAGATCTCATCCACAAGGATATCATGCACAAGGCTCTCAACGTTCCCCCTACACCGAGTCCTGATTCGGCCATCCATTCCGCATACAGTGTATTCAGCTCGCCAAATCAGAGTCCTCTAACCCAGAGGCATGTCACGCTTACACCTAATCTAAGTAGAAACAACAGCGACGCCTCACATTCTAGCTGTTATAGCTGCAGCAGCGTTTCAGTATCGGTTTCTCCTACGCAGCAGTTTTCGCCGACGCACAGTCCAATTCAGggtCGGCACGCGCCAAATCTTCATAACAGCCCTCTCCATCACAACGTACTTTTCAGGAGTGTTCAAGAGGACGCTTGCGTGCAGTATACCACTGAACACGACAATCTAGAGGAAAACGAAGATAAGACTGGGTTAGTTCACCCACCATTGACAGCTCAAACGGGCATTTCCCGACAGCAGCTCATCAACAGTCCGTGTCCGATCTGTGGGGACAAAATATCCGGGTTCCATTACGGCATCTTTAGTTGTGAATCGTGCAAGGGCTTTTTCAAACGGACAGTGCAGAATAGGAAAAACTATGTGTGTTTAAGAGGAGCAGCGTGTCCGGTCACAGTAGCAACGCGAAAAAAATGCCCCGCATGCCGTTTTGACAAGTGTCTCAAATGTGGTATGAAATTAGAAGCGATAAGGGAAGATCGTACTAGAGGTGGCCGTTCCACATATCAATGTTCATATTCCTTGCCTCCTTCTCTGGCCGGCCATTCGGAACTGCGGGCAAGTTCCAGTGATCTTCGTCACCAAATCGGAGATCCGCACCTCACCGTTAAGCTGGAACCGCCCGATACAGGAATCTCGCATTCGAAACGGCTCAATTCTAATTCCAGGCACGGTGTCCCTCCGTTATTGCAAGAAATAATGGATGTGGAACACCTGTGGCATTACAATGAATCAGAACTGAATAAGCTCAATTCCGAAGGGAATTCAAAAGATGGTTCCAGTAGCTCAGTTCCTAACCTTTCTAATCATCCACTGCTGGCTGGAACGGGACTTGCCGGTTCAGCTGATACAAATCCCGATTTCGTTGCGAACTTGTGCAATATCGCGGATCATAGATTGTACAAAATCGTCAAGTGGTGCAAAAGCTTGCCTCTCTTTAAGAATATATCGATTGACGATCAAATTTGTCTACTTATTAACTCCTGGTGTGAACTTCTCTTGTTCTCGTGTTGTTTTCGATCGATGTCATGTCCGGGCGAGATCAGGATATCTCTGGGAAAAAGTATTACTTTGGCGCAAGCTCGAGATTTGGGAATGCAGTCCTGTATCGAACGTATGCTCAACTTCACGAAACAATTACGGCGACTACGAGTCGACAAATATGAATATGTTGCCATGAAGGTTATCGTCTTGCTTACATCGGATACGAGTGAATTGCGGGAAGCCGAAAAGGTACGTGCGTCTCAAGAGAAAGCTTTACAAGCGTTACAAGATTACACCTTAGCTCATTATCCAGAAAGTCCTGCAAAATTCGGGGAACTGCTATTAAGAATTCCAGAGTTACAAAGAACTTGTCAGgCAGGGAAGGAGTTGTTAACGATAAAAACAAAGGATGGAGAAGGTCCGAGTTTCAATTTACTGATGGAGTTACTCCGAGGGGACCACTAG
Protein Sequence
MATDMRSPNVSVTPINMEPYPPAPLTALTNGDRRSSLQGHTHTTIIASSGSGSGSSASNEPPLDPSDAEVAQIDFQSTHVNMRSKKTKRGGSGVIDNSSIDLLPRPMSWEGELSDCERDHMCIDDDHSSQVPENLSLSLNKHTQANLHDSKESPIMRLSQAPVVSSYSLHSTPSNSPLLSQRQSTTVTNVPILGHKDLIHKDIMHKALNVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHVTLTPNLSRNNSDASHSSCYSCSSVSVSVSPTQQFSPTHSPIQGRHAPNLHNSPLHHNVLFRSVQEDACVQYTTEHDNLEENEDKTGLVHPPLTAQTGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFDKCLKCGMKLEAIREDRTRGGRSTYQCSYSLPPSLAGHSELRASSSDLRHQIGDPHLTVKLEPPDTGISHSKRLNSNSRHGVPPLLQEIMDVEHLWHYNESELNKLNSEGNSKDGSSSSVPNLSNHPLLAGTGLAGSADTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSCPGEIRISLGKSITLAQARDLGMQSCIERMLNFTKQLRRLRVDKYEYVAMKVIVLLTSDTSELREAEKVRASQEKALQALQDYTLAHYPESPAKFGELLLRIPELQRTCQAGKELLTIKTKDGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01498957;
90% Identity
iTF_00434158;
80% Identity
iTF_01120898;