Oabi000739.1
Basic Information
- Insect
- Orussus abietinus
- Gene Symbol
- bab1
- Assembly
- GCA_000612105.2
- Location
- NW:5559-14096[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.3e-13 6.7e-10 37.6 0.0 1 39 382 421 382 425 0.90 2 4 1.3e-12 2.1e-09 36.1 0.1 2 39 437 474 436 477 0.94 3 4 4.8e-19 7.5e-16 56.7 0.0 2 45 492 536 491 536 0.97 4 4 5.5e-19 8.6e-16 56.5 0.1 1 42 543 585 543 586 0.97
Sequence Information
- Coding Sequence
- ATGGAGTCGAACCGTTACTGGGGTGTCCATTACAGcgGAGGCATGGCCGGGCAGCATTACTGCCTGCGATGGAACAACTACCAGTCGAACATGACGTCCGTGTTCCATCAGCTCCTGCAGACGGAGGCCTTCGTGGACGTCACCCTCGCCTGCAACGAGGCCTCTCTCAAGGCGCACAAGGTGGTGTTGTCGGCGTGCAGTTCCTACTTCCAGAAGCTTCTGCTCTCGAACCCCTGCAAGCACCCGACCATCATAATGCCTCAAGACGTGTGCTTCAACGATCTGAAGTTCATCATCGAGTTCGTCTACCGAGGTGAAATCGACGTCTCCCAGGCGGAGCTGCAGTCCCTCCTGAAGACGGCCGACCAGCTCAAGATCAAGGGCCTCTGCGAGGTGCCCGAGAGCAAGGAGGGCCCGCCCTCGGTCAGCCTCGGCTCGCCCTCCAGGGATCCCGGCACGCCCCGGCTCAACTACACCAAGCTGAAGAGGCACCACTCCAGGTCGAAGAGGGCCCGCTTCGAGGCGAGACCGGACCCCGGCCCGGAGGGTAGGAGGTACAAGGAGGAAGACGGGGACCCCCTCGAGGAGCGGTACTCGCGCGACGACAAGGAGAACATCCGGGACTGGCAGACGGAAGATGAGGACTGCCCGGAGACCGCAGTAGTCCTGGAGTCCTGCCAGCGAGACGGTGACAACGGCACCGGAGCGAACGACGACAACGGCGAAATGTTCTGTCACACAGGACTGGGGCACTACGGTCATCACCCGGACCCGGCGGAGGTCGACCTGCCGCCCGAGACCCAGCCCACTCCGCCCAGCGCCACCCTCGTCGGCACCACCGTCACCCACCTGAGGGACTCCGACCACCACTCCGCCGACATCCAGACTTGCGACAGCGTGAAGATCAAGTTCGAGACGCTGCACACGATGGACTCCTCCGACACGATCGACATCGACAGCCACATGTCGGATCGGGCGAGCGTCAGCTCGAAGAACGCCGCGGACAACGACAACATGATGATGATCACCCCCGAGCTCCTCGGCCTGATGCCGTCCGGAAGCTCCGTGCACTCCGACTCGGGGGACAACCTCAGGAGCCACTCGGGCCAGTCCGGGTCGCACCACCACGGCTCCAAGTCCTGGACCCAGGAGGACATGGACGCCGCCCTGGAAGCCCTCAGGAACCACGACATGAGTCTGACCAAGGCGTCGGCGACCTTCGGCATCCCTTCCACCACCCTGTGGCAGAGGGCGCATAGATTGGGCATCgacaccccgaagaaggaCGGCCCGACCAAGTCCTGGAGCGACGAGAGCCTGAATAACGCCCTGGAGGCCCTACGGACGGGCACGATATCCGCGAACAAGGCGTCCAAGGCGTTCGGGATCCCCTCCAGCACGTTGTACAAAATCGCGAGGAGGGAAGGGATCAGGTTAGCCGCCCCCTTCAACGCGAGTCCCACGACCTGGTCTCCGGCCGACCTCGACAGGGCCTTGGAGGCCATCCGTTCGGGCCAGACCTCGGTCCAGAGGGCGTCCACCGAATTCGGCATCCCCACCGGCACCCTCTACGGCAGGTGCAAGAGGGAAGGCATCGAGCTCAGTAGAAGCAATCCGACGCCCTGGAGCGAGGACGCCATGACGGAGGCCCTCGAGGCCGTCAGGCTGGGCCATATGAGCATCAATCAGGCCGCCATTCACTACAACCTACCATATTCCTCGCTCTATGGGAGATTCAAGAGAGGGAAGTACGAGGAGCCCGTCGTCAGCGAGATGTCCCAGGACGGAACCAATCCTCACTTCCATCAGAGTCCTAATCAAAACCACTCGTCCTCCCTCCCCGACCAAATGCCTTACCAGGGCAGCTGA
- Protein Sequence
- MESNRYWGVHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESKEGPPSVSLGSPSRDPGTPRLNYTKLKRHHSRSKRARFEARPDPGPEGRRYKEEDGDPLEERYSRDDKENIRDWQTEDEDCPETAVVLESCQRDGDNGTGANDDNGEMFCHTGLGHYGHHPDPAEVDLPPETQPTPPSATLVGTTVTHLRDSDHHSADIQTCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADNDNMMMITPELLGLMPSGSSVHSDSGDNLRSHSGQSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVSEMSQDGTNPHFHQSPNQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_01120310;
- 80% Identity
- iTF_01120310;