Oabi002666.1
Basic Information
- Insect
- Orussus abietinus
- Gene Symbol
- retn
- Assembly
- GCA_000612105.2
- Location
- NW:71110-230094[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4 8.6e+03 -3.7 0.0 68 82 205 220 196 220 0.66 2 2 7.4e-26 1e-22 79.4 0.0 2 89 227 312 226 312 0.96
Sequence Information
- Coding Sequence
- ATGGAGATCTCCGACGAGTACCAGGACATGGGGAACCCCGGCGGAGGGGTCGCCATGGCCAACATCTCCATGGGGCACCATCGCAACACGCCGGACAGCCCGGTGTCACATCAGGAGGAGGACTTGTCGGACCCGGACCTCCAGGATGAAGAGAGTGGCGAAGAGTTGCCCCAGCAGCCGCTCCAGGGCAACAATCATTCGCCATCGGATGCCACGTCCATTCCCGTcacgacgccgacgccgctTACGCACCTCAACAGCCTCATGAGCTCGCACCACCCTCATTTCCTGACCAAACTCAAAATCGAGAACGACATGGAGGCGCTGGGCGGCAAAAGCGGCCTGGAGGCGCTCCAGGCCGCGATGGGCAGCGGCGGCTTCAACCTGCCGTTCTCGTTCCCGCCACCGGCCGCGTTCCTGGCGCCGCAGCACCACCCCCAGAACAGCCACCCCGCGGCCACGGGGACCTCGGGCAACGCCCTGACCACCTCCTCGGCCAGCTCGCATTCGAGCGAGTCGTCGCAGGGCAGCCAGAGGAACGGCGAGGTGCGCGACAGCGGGATCCACGGAGGCCAGTCcagcgccgcggccgccgcggggAGCGCCCATCAGCAGCAGACCAGCTGGAGCTTCGAGGAGCAGTTTAAACAGTTGTACGAGATCAGCGATGATCCGAAGCGAAGGGAGTTCCTGGACGATCTCTTCAGCTACATGCAGAAACGCGGAACCCCCATCAACCGATTGCCCATCATGGCGAAGTCCGTCCTGGATCTCTACGAGCTGTACAACTTGGTGATAGCCCGTGGCGGCCTGGTAGATGTTATCAACAAGAAGCTCTGGCAGGAAATCATCAAAGGTCTGCACCTGCCGTCGAGCATCACGTCCGCCGCGTTCACTCTGCGCACTCAGTATATGAAGTATCTCTACCCATACGAGTGCGAGAAGAGGAGGCTGTCCACGCCGGCGGAACTCCAGGCGGCGATCGACGGCAACCGGCGGGAGGGCCGACGGAGCAGCTACGGCGCGTACGCGGGCGGCGCCTCCGCGGGGGACGCCCTCGTCCAGAGGAGCTCGCACACCCCGAGCTCCCTGGCGCTGCACGCGCAGATGTCACCCCTCTCCCTGGTGACGGCCGTTGCTGCCGGTGGTCAGCATCACGGGCCCCAAGCTCTGGTCAACGGGAGCGCCGCGCACACGCCACTGTCGCACCATCCGCACCACCCGCACCACCCTCAGCACCCACAGCACCCCCAGGGCCCGCTGGGCCAGCCACCCAACGCCGGTCCCATTCCCGGCATGGCCCCCGCAGAATTCGAGGCTCGTATGGTGGAGTACGTGAAGTTGCTGAACAAGGAGCTGAGGAGCGCCGGGGCGGGCACGCCACCCCCGATGATCCACCGCCAGGGGAGCTCCTCGCCGCCGTCCTCGACACCTCCCAGGGATAGCGCTTTCAGCGCCCTCGACGTGTCCCGGCTAACCCTCTGGAATATGTACAACAACAATACCCTCTACCCCGGGGTGGGCCACCAGCCCCCGCTGTCCCCGCAGGCCTCGCACTCGCCCTTGCCACCGGCTTCCAGCCCCGAGCCACAGAGGGAGGCACTGGACTTGGGACTCAGGCAAAGCCCACCTTCCTCCGGCGGAAGTGCACACCAGAAGAGGGATCAGGAGCTTTCCGGCACGCCGATTCCACCTGCTGCCAAAAGGTCGCTTTCCGACGACGAAAGCCCCACGGAGAAGAAGTTCGGAGCTCTCCCTGGTACACACATCAAAATCTCCAACAGAGGAGACGGCCGTAACGGAGACAATTCCTTAGTGGTCAGTATGGAGTTAAACGGAGTCATGTACGAGGGTGTCCTGTTCGCCCAGACGGACAACAGCAGGAGCGCAACATCCACGACGACCAACAGTACGAAAACAGCGCGCGGTATCGTGTCGTGA
- Protein Sequence
- MEISDEYQDMGNPGGGVAMANISMGHHRNTPDSPVSHQEEDLSDPDLQDEESGEELPQQPLQGNNHSPSDATSIPVTTPTPLTHLNSLMSSHHPHFLTKLKIENDMEALGGKSGLEALQAAMGSGGFNLPFSFPPPAAFLAPQHHPQNSHPAATGTSGNALTTSSASSHSSESSQGSQRNGEVRDSGIHGGQSSAAAAAGSAHQQQTSWSFEEQFKQLYEISDDPKRREFLDDLFSYMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAGGASAGDALVQRSSHTPSSLALHAQMSPLSLVTAVAAGGQHHGPQALVNGSAAHTPLSHHPHHPHHPQHPQHPQGPLGQPPNAGPIPGMAPAEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSSSPPSSTPPRDSAFSALDVSRLTLWNMYNNNTLYPGVGHQPPLSPQASHSPLPPASSPEPQREALDLGLRQSPPSSGGSAHQKRDQELSGTPIPPAAKRSLSDDESPTEKKFGALPGTHIKISNRGDGRNGDNSLVVSMELNGVMYEGVLFAQTDNSRSATSTTTNSTKTARGIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00360694;
- 90% Identity
- -
- 80% Identity
- -