Oinc018611.1
Basic Information
- Insect
- Orthosia incerta
- Gene Symbol
- -
- Assembly
- GCA_948252205.1
- Location
- OX411767.1:3691496-3693838[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.013 17 6.8 2.5 18 43 9 31 4 32 0.93 2 17 0.21 2.7e+02 2.9 1.8 17 44 36 60 31 60 0.81 3 17 0.0013 1.8 10.0 0.1 18 43 68 90 65 91 0.87 4 17 2.9e-05 0.039 15.3 1.4 17 44 98 122 95 122 0.91 5 17 0.00058 0.77 11.1 1.2 18 44 129 152 127 152 0.94 6 17 7.2e-05 0.095 14.0 1.3 15 43 157 182 153 183 0.89 7 17 0.004 5.3 8.4 0.3 17 44 188 212 184 212 0.89 8 17 0.0042 5.5 8.4 0.7 18 44 220 243 214 243 0.86 9 17 0.024 32 5.9 0.0 18 44 255 278 246 278 0.89 10 17 3 4e+03 -0.8 0.7 14 24 299 309 284 326 0.66 11 17 0.77 1e+03 1.1 0.0 15 27 359 371 355 385 0.80 12 17 0.11 1.5e+02 3.8 2.9 17 43 406 429 399 430 0.88 13 17 0.0038 5 8.5 2.8 14 43 461 487 452 488 0.78 14 17 0.089 1.2e+02 4.1 0.8 17 44 493 517 489 517 0.85 15 17 2.3 3e+03 -0.4 0.5 19 43 555 576 551 577 0.75 16 17 9.9e-05 0.13 13.6 1.8 6 43 606 642 604 643 0.82 17 17 0.23 3.1e+02 2.8 0.4 15 40 660 687 651 697 0.88
Sequence Information
- Coding Sequence
- ATGTATCACAGCCAATTGGATTTCGTCTGCGACTACTGCTCAAGAACGTTCACAAGAAAATACAACTTGCAAACTCATATAGAAAACTGTCACATCAACTCATCTTGTCATTGTAGTATTTGTGGCCAGAACTTCGGTAGTCCGGCAGGGTTACTGCAACACCTGTCGAGAGGCCACAATAATTATGGCCAGCCCTTTCCAGAGTGCGAACTTTGCGGACGAATATTCACTCGCAAACAGAACATTACTTCCCATATGATAACTGTACATCTACAAGGATTAGGTTACGAAATAAAGTGTCGTCTATGCGAAAAAACATTCACAACGGAACGCAATTTGAAACGACATTTGAATCAATTACATAATCCAGATGTTGAGTATCCAACCTGCAACGATTGCCACAAGGTCTTTAAAGGAAAGCACTCTCTCATAGCTCATATTCAGTCTGTTCACAATGTCACCGAAAAAGATGCAATCAAGTGTCATCTATGCGAAAAAGTTTACACCAATAACAGGAACTTGAAGCGGCACATCGAAATGTTCCACGGCGAAAAGGGAGAGTTCCGATGTGACATCTGCCCGAAAGTATACACCTCTAACCAGAGTTTGAGACGCCATGCCCGAACAAGACACAGTACGGACAACCAGGAACATTTGACGTGCAATTTTTGCATGAAAGTTATCATCGGGCGGGAGAACTTCGAAAGCCATATACAATTTCATCATCAAGACACTGAAATGGATGTTAAAACCGCTGAGTTTGTCTGCGAATATTGCGAACAGGGCTTCGACGAAGAACCTTGTTTGCGGCAACACGTGAAAACGGAACATTCGTTCAAAACTTTCTATAAGTATTGCAAGAAATCGTTGCTCAAACAGTACGGGATGGACACACGGACAATATACAACTGTGAATTCTGTCACTATTATTTTTTGACCGTCTACGAGCTTAAAGAGCATATGCGAGTGAGCCATGATACGGAATACTCTCTCTCGACTTGCAACGTATGCTTCACTAAGTTTTACAGTACAGTAACCATGTCTGCTCATAGAGAGGTTTGTTTGCCGCCAGCAAACGTGAACTCTTGCAGTCACTGCGACAAACTCTTCACCGATATCTCCAGCTTAGAATTTCATACGAGAATCTTCCACCCGCAAGCTCAAATCGCTGACTCCAACATATCATCAACGAACATCGATGACGAAACCGTCTCATTCAAATGCGACCATTGTGACCGCGTCTACTACAGCGACAGATCATTAAAACATCATATTAAGCTAAAACATACCTCCGACGAACAGGTCGAATGTGAAATGTGTGGTAAAATATGCAGTAACAAGTATTATCTCGCTGCACATATTAAAATAGTTCACAACAACGATTCTTGGTCCCGTTGCGAATACTGTGATAAACAGTTTAAATCTAAAAGAAATATTAGAAGACATATTGAGTACACTCATCTAGGCATGCAGAGATACAAGTGCATCGAATGCGAGACCTTGTTCAAAGAAAAACGGAGCTTAAGAAAACATGTGCGGACTAAACATCCTGATTCGGCTTCGTTTCCTCAGTGTCATATATGTTACAAACGGTTTGAATCAGCCAAATCTTGTAAAATCCATCTGAAACTTGTGCATTCTTTTAACATGAACACCTACCCGTGTCACTTATGTTCCGTATCGTTTAGTTCGAACGAAGCTTTGAGTATACACTTACAGACACAGCATCTAGCCGAGGACCAGATATATAAATGCGAGGAGTGTAATTTAGTATTCAAAGGGCAGGAAAAATTTGATGCACATAACGATATCTGCCACGTCAACTTAGTCCCGGCGATCAAGCAGAAAGTGTTACCACGATGCATTCTCTGCATGAAAGACTTTAGTACACGCAAAACTTTGAAACGACACATTAAAAAGTTCCACGAGGAATTCGACGTGGATGAATTAGCAACTTTCGGTTCTAGACGGAGAACTTTTACAGTGGATTGCGAAGATTGTATCAAGAACTTTAGCGACGATTTTCATTTGAACGTTTACAACAAAATCAAGCATTTACGAGACACTGAAGTGTTCAAGTGCGCTACTTGCTTCGAATCTTACAATTCATTAGAATTCGCGATTCAAAGATATAAGGTTTTAAACGCCGATGCTTGTAAAAGCAAAATGATCCTAAGTGAGCTGTGTACCGCTGAAATGAGTGAGGAGGAGAATGATTTCTCTAGCTTTGGAGCTTTACATGACATGTTGCCTGAAAGTACGACTGGTGATCTGAATATAAAGTGTGAACCTCTTGATGATGTGTTTATGAGTGATATCAAGATGGAACCAGATTCACCGTAA
- Protein Sequence
- MYHSQLDFVCDYCSRTFTRKYNLQTHIENCHINSSCHCSICGQNFGSPAGLLQHLSRGHNNYGQPFPECELCGRIFTRKQNITSHMITVHLQGLGYEIKCRLCEKTFTTERNLKRHLNQLHNPDVEYPTCNDCHKVFKGKHSLIAHIQSVHNVTEKDAIKCHLCEKVYTNNRNLKRHIEMFHGEKGEFRCDICPKVYTSNQSLRRHARTRHSTDNQEHLTCNFCMKVIIGRENFESHIQFHHQDTEMDVKTAEFVCEYCEQGFDEEPCLRQHVKTEHSFKTFYKYCKKSLLKQYGMDTRTIYNCEFCHYYFLTVYELKEHMRVSHDTEYSLSTCNVCFTKFYSTVTMSAHREVCLPPANVNSCSHCDKLFTDISSLEFHTRIFHPQAQIADSNISSTNIDDETVSFKCDHCDRVYYSDRSLKHHIKLKHTSDEQVECEMCGKICSNKYYLAAHIKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPDSASFPQCHICYKRFESAKSCKIHLKLVHSFNMNTYPCHLCSVSFSSNEALSIHLQTQHLAEDQIYKCEECNLVFKGQEKFDAHNDICHVNLVPAIKQKVLPRCILCMKDFSTRKTLKRHIKKFHEEFDVDELATFGSRRRTFTVDCEDCIKNFSDDFHLNVYNKIKHLRDTEVFKCATCFESYNSLEFAIQRYKVLNADACKSKMILSELCTAEMSEEENDFSSFGALHDMLPESTTGDLNIKCEPLDDVFMSDIKMEPDSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00447464;
- 90% Identity
- iTF_01230865;
- 80% Identity
- iTF_01119590;