Oinc004758.1
Basic Information
- Insect
- Orthosia incerta
- Gene Symbol
- clz9
- Assembly
- GCA_948252205.1
- Location
- OX411756.1:29706542-29708725[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-07 0.00017 22.5 0.0 3 41 17 54 15 57 0.92
Sequence Information
- Coding Sequence
- ATGCCGAGACCGAAAAATAAGGAACGGAAAATAGGGAAACACAATAAAGAAGAAATGATATCAGCGTTACGTATGATAGAAAATGGTACCTCCATTAGGAAGACAGCAGAAAACTGTAAAATTCCGTACCCTACATTGCGTCGTTACGTGCAAAACAAACGTGAACACGGTGATAATATGTCACTTGTACCTAGGTATGATATTAATAAAGTATTTACTGAAGAACATGAACAATTATTATTGAAATACTACAAGGAATGTGCACTTATGTTCTACGGTTTGACCGTCAAAGAATGTAGGAAGGTGGCGTACGAAATGGCAAAGGTTAATGGTGTTAAAACACCAAGCTCATGGGAAAGAGATCATTTGGCAGGTTTAGAATGGTTTCGATCTTTTAAAAAAAGACATCCTGATATTTCAGTGAAGAAACCAGAAGCTGTAAGTCTCGCACGAGCTACGTCATTTAACCGTGAAACTGTGAAAACATTTTTTAATAATTTGGAAGAGTTGCTGAAACGGGAGCCTAGATTCGCGGATGGAACTCGAATATTCAACCTTGACGAAACTGGCACAACCACCGTCCAGAAACCTCAGAAAGTTGTAGCTCCAGCAGGATCTAAAGTGGGTAAAGTGACAAGTGGAGAAAAGGGCACTCTCGTCACTACATGCTGCATGGTTAGTGCTACAGGCCACGCCCTGCCTCCTGCTTTAATATTTCCTCGAAAAAACTTTAAAGACTTGATGATGCACGGTGCACCTCCAAGTAGTTTAGGGCTCGCGAGTCCTTCAGGTTGGATGAACAGTGACTTGTTCGTGGTTGTAATGAAACATTTCATTAGGTGTTCAAGCACGACACCAGAAAATCCATGTCTGTTAATAATGGACAATCATGAGTCACATTTGTCCATTGAGGCTCTAGATTTAGCGAAACAATCTGGCGTTGTGGTTCTTACGTTTCATCCTCACACCACTCACCGAATGCAACCCTTAGATGTAGGTTTGATGGGCCCTTTAAAGACCTACTATTATTCCGCACTAGAGTCATGGATGCTACAGAACCCAGGAAAACCAGTGACAATCTACGAAGTAGCAAGATTCATTGGTCATGCTTATCCCAGATCTATGACGCCGCTAAATATATCAGCAGCTTTCGCAAAATGTGGAATTTTTCCTTTTAATAAGGATATATTCTCCGATGAAGACTTCATGCCAAGTAGCGTGACAGACCGCCCCGATCCTGTGGTGTCCCAAAATTTTCCTGAAGCTGAAGCTTCTGTAAATTTCGAAATTAATAGAAGCAATAATCAAGAAGATTCGACTCCTCAAGAGAATAGAAGCAATAATCTACAGGAATGGACTCCTCTAGAGACACGTCGTTCAAGTTATGATCCCGTTGTTACCCCTGATCGAGAAAGTCCATCTATACTATCGCAAGAACATAATATTTATTACCAAAACGTGACACCGCCAAAGCAACCAGACGAAGATGAAAATCGTCCTCCAAAGTCTGAGCATATCATCACACCTCAAATGTTCCGTCGTCCGCTAAAGGCTGGCCCTCGTTCCAACAAACGGAAAGGAAGAAAACTGGGCAAAAGCATGATAGCAACAGACACGCCCGAAAAGGAAAGAATAGCTGTGGAACGTACCGCAGCATTAAATAGAAAAGTTCAGCATAAAAGAAAAGTTCTACAAGATAGTGGAAATGAAATGCTTCCATCGACGAGTAAAAATAGTAAAACATCAAATAAGAGAAAGAATAAAAGAACAGTTGTACTAGACGAGGACAGTGAAACGAGTGAAGAAGGAGACATAATTCTTGAAAGTGAAACAGACCTAGAATCTGATGAGGAAGAGGACAAAATTATAGATGAAGATTTTCCTAATTTACAGCGTAAGCCAATGATTGACGAATATGTCCTTGTATTGATGCAATCTAAAAAACGGGTTGTTTACTATATTGCGAAGATCCTGGAAAAAGAAAGTGATGATGAATATTGCGTTTCGTACCTAAAATTAAAAGATGGTCTTAATCAAACGTTTATGTTTCCTTTAGAACCTGATATGGCAAATGTGACACTGAATGACATTAAAATGATTCTCCCTCCTCCTTGTGTGTCAGGTACAAAACGTCTTATTAAATATTCCTTCAATGTGAACTTATCTTTATTAAGTATGGCGTGA
- Protein Sequence
- MPRPKNKERKIGKHNKEEMISALRMIENGTSIRKTAENCKIPYPTLRRYVQNKREHGDNMSLVPRYDINKVFTEEHEQLLLKYYKECALMFYGLTVKECRKVAYEMAKVNGVKTPSSWERDHLAGLEWFRSFKKRHPDISVKKPEAVSLARATSFNRETVKTFFNNLEELLKREPRFADGTRIFNLDETGTTTVQKPQKVVAPAGSKVGKVTSGEKGTLVTTCCMVSATGHALPPALIFPRKNFKDLMMHGAPPSSLGLASPSGWMNSDLFVVVMKHFIRCSSTTPENPCLLIMDNHESHLSIEALDLAKQSGVVVLTFHPHTTHRMQPLDVGLMGPLKTYYYSALESWMLQNPGKPVTIYEVARFIGHAYPRSMTPLNISAAFAKCGIFPFNKDIFSDEDFMPSSVTDRPDPVVSQNFPEAEASVNFEINRSNNQEDSTPQENRSNNLQEWTPLETRRSSYDPVVTPDRESPSILSQEHNIYYQNVTPPKQPDEDENRPPKSEHIITPQMFRRPLKAGPRSNKRKGRKLGKSMIATDTPEKERIAVERTAALNRKVQHKRKVLQDSGNEMLPSTSKNSKTSNKRKNKRTVVLDEDSETSEEGDIILESETDLESDEEEDKIIDEDFPNLQRKPMIDEYVLVLMQSKKRVVYYIAKILEKESDDEYCVSYLKLKDGLNQTFMFPLEPDMANVTLNDIKMILPPPCVSGTKRLIKYSFNVNLSLLSMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00449051;
- 90% Identity
- iTF_00111595; iTF_00111596; iTF_00111597; iTF_00111598; iTF_00111599; iTF_00111600; iTF_00111601; iTF_00111602;
- 80% Identity
- -