Basic Information

Insect: Orthosia gracilis
Gene Symbol: znf711
Assembly: GCA_947562075.1
Location: OX387265.1:24558206-24559633[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 3.3e-06 0.11 13.5 0.4 8 49 172 214 167 217 0.87

2 5 0.0018 56 4.8 0.1 21 44 246 269 238 276 0.85

3 5 2.6e-05 0.82 10.6 0.1 22 46 303 327 299 332 0.88

4 5 0.087 2.7e+03 -0.7 0.0 27 53 336 362 329 363 0.78

5 5 6.3e-05 2 9.4 0.3 11 50 373 412 366 414 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	3.3e-06	0.11	13.5	0.4	8	49	172	214	167	217	0.87
2	5	0.0018	56	4.8	0.1	21	44	246	269	238	276	0.85
3	5	2.6e-05	0.82	10.6	0.1	22	46	303	327	299	332	0.88
4	5	0.087	2.7e+03	-0.7	0.0	27	53	336	362	329	363	0.78
5	5	6.3e-05	2	9.4	0.3	11	50	373	412	366	414	0.84

Sequence Information

Coding Sequence: ATGGCTACAAAACTGTGTAGATTGTGTTGTCAGAGTGAAGGCACGTCGTACATTTTTAGCAAAGAAATTGATGAAATTGTAATAAGTGCAAAAATAATGTATTGTTGTTCAAATATAAATATTAAAGACGGGGATGGACTTCCCTTGTATATTTGTGAAACCTGCCTAAAAGAGCTCGCAGCTTGTTATCAATTTGTACTAAAATGCGAAGCTTCTGATAAGAAATTAAGATCTCAAGCTTTCGAAGTAATAACCCAAGCTATTCCAGATTTCAACGACTGCTTACCAAAAATTGAAGTAAAACTTGAATTAGACTGTAACAGCGACGATGGTCACCTTTACGAAGATTTACAAAATTATGATATTGCTCTTGAACAAGTAAGGCGAGATAATCTAGAAATAAATTTGGAAAATGTATATTCCAAAATATCACCTAAACGAAAACCACCCAAACAAAGAGCTGAATATAAAGGTCTGGAGAAATGTACTTGCTCAGTTTGTGGCCGAACTTGTGCTAATCCATCCACCTTTAAGGCTCACATGAGATCGCATACTAATGAGAAACCATACCCTTGTCCTTTATGTGATAAAAAATACAAAGACAATGGCACCCTCAAACGACACATGGACAGAAATCATGTCCAACAGAAGAGGCAGCGGAACTTCATTTGTGAAAACTGTGGCAAAAGCTTCTACTCTAAGAATGATGTGAAGGTTCATATGCGTACTCACACGGGGGAAACACCATATAGTTGCTCCATATGCACCCTCAGATTCACACAGATCAGTGCGTTACAAAGACATAAAAAGCGGCACACTGGTGAGAAGGAACACTTGTGCACAGCTTGTCCAAAAAGATTCTGTACTAAGGCAGAACTAAAAAGTCACCTCTTGGCACACAGTACTGAGAAAAAGTTCTCCTGTCCTCTCTGTAATGTATTATTTAAGTATCAAAGCAATTTGAGGAAACATGTGAGACTGCACTCTGAACCAAATAGATTTGTGTGCAACCACTGTGGACGTACATTCAATGTTAAAGGGAACCTGAAGAGCCACATTGACAAGCAACATTCTGAGAAATCTGGTCACTGTTCTGTTTGTTTAAAACATGTTGCAAATATGGAGGTTCACATGTGGAGACATACGGGACAAAGACCATTGAAGTGTGAGCTCTGTACAAGCACCTTTTATGAAATGAAGTCTTTGGCTCGCCACATGAACTATAGACATAAGGCAACTGATAGATTTAAGTGTACAGCTAAAGAGTGCCTGATGACATTCCCATCAAAGCCGATGCTGGACTTCCATACTGCTAAGCTTCATAGTACCCACATCCCATTTCCATGTGATAGGTGTACCAGAGCATTTTACAGGAAAAATGATCTTGCCCGGCATAAAATTGCCACACATAAAGAAAGACTCACTTAA
Protein Sequence: MATKLCRLCCQSEGTSYIFSKEIDEIVISAKIMYCCSNINIKDGDGLPLYICETCLKELAACYQFVLKCEASDKKLRSQAFEVITQAIPDFNDCLPKIEVKLELDCNSDDGHLYEDLQNYDIALEQVRRDNLEINLENVYSKISPKRKPPKQRAEYKGLEKCTCSVCGRTCANPSTFKAHMRSHTNEKPYPCPLCDKKYKDNGTLKRHMDRNHVQQKRQRNFICENCGKSFYSKNDVKVHMRTHTGETPYSCSICTLRFTQISALQRHKKRHTGEKEHLCTACPKRFCTKAELKSHLLAHSTEKKFSCPLCNVLFKYQSNLRKHVRLHSEPNRFVCNHCGRTFNVKGNLKSHIDKQHSEKSGHCSVCLKHVANMEVHMWRHTGQRPLKCELCTSTFYEMKSLARHMNYRHKATDRFKCTAKECLMTFPSKPMLDFHTAKLHSTHIPFPCDRCTRAFYRKNDLARHKIATHKERLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01118608;
90% Identity: iTF_01119616;
80% Identity: iTF_01118608;