Basic Information

Insect: Orthosia gothica
Gene Symbol: RREB1
Assembly: GCA_949775005.1
Location: OX459035.1:37653929-37667960[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.082 16 8.2 0.5 1 23 94 117 94 117 0.94

2 11 0.024 4.9 9.8 0.1 1 23 307 329 307 329 0.97

3 11 0.0013 0.26 13.8 0.4 1 23 338 360 338 360 0.99

4 11 0.00081 0.16 14.5 2.0 1 23 366 389 366 389 0.97

5 11 0.0033 0.65 12.6 1.6 1 23 741 764 741 764 0.96

6 11 0.00027 0.055 16.0 1.3 2 23 959 980 958 980 0.97

7 11 0.12 24 7.6 6.5 1 23 986 1009 986 1009 0.97

8 11 0.11 21 7.8 1.5 1 23 1044 1068 1044 1068 0.91

9 11 0.033 6.6 9.4 0.2 1 23 1092 1115 1092 1115 0.95

10 11 0.025 5 9.8 0.3 2 23 1155 1176 1154 1176 0.92

11 11 0.031 6.2 9.5 5.3 1 23 1182 1204 1182 1204 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.082	16	8.2	0.5	1	23	94	117	94	117	0.94
2	11	0.024	4.9	9.8	0.1	1	23	307	329	307	329	0.97
3	11	0.0013	0.26	13.8	0.4	1	23	338	360	338	360	0.99
4	11	0.00081	0.16	14.5	2.0	1	23	366	389	366	389	0.97
5	11	0.0033	0.65	12.6	1.6	1	23	741	764	741	764	0.96
6	11	0.00027	0.055	16.0	1.3	2	23	959	980	958	980	0.97
7	11	0.12	24	7.6	6.5	1	23	986	1009	986	1009	0.97
8	11	0.11	21	7.8	1.5	1	23	1044	1068	1044	1068	0.91
9	11	0.033	6.6	9.4	0.2	1	23	1092	1115	1092	1115	0.95
10	11	0.025	5	9.8	0.3	2	23	1155	1176	1154	1176	0.92
11	11	0.031	6.2	9.5	5.3	1	23	1182	1204	1182	1204	0.97

Sequence Information

Coding Sequence: ATGCAGGGTGCTGCCACCGCGCCCGCACCTCCCGCGGCCGAGCCGCCATCTTCGCAACAAATCAAAACAGAAGAAGCCTTATGTGAAGCGAAAATCGAGGCCGACGAAAAAATGGACGCCGTTCAAATTGAAAAGCAGGAACTTCGCGTCACTAGGACGACGAGCATCGACAGTGACAACCGATCTGACAGGAGCGAGGAGGAGGACTTAAGGAGAGCGCGCAAACGAGCTGCGTCTACCTCCCCATCACTAATGCCAATGGATAAGCGAACAGCGAGATTCGAGTGTCCCAAGTGCCGGCAGCGATTCGACTCGGTCAACGCTTTCGACATCCACCGATTCACTGCACACAGTGACGATACTAAGACTGGCTTCGACGATCTCACCTTCGTCGATTTCTCAAGCAAAAAATTTCCTGAAATCGCCAGAGGAGTCTGCGAGAGAAACCCACACGTGTCCGTGACAGACCAACGTTACAGGTGTGACATGTGCTGCAGAGACTTTCCTTGTGGACAAGCTTTGGACATTCACAGGAAATCGTGCCTCACGGCCACCCGGATCCCCAGTCCTGAAAGAGATCGCAGGGAGGACTTCTTTGCTAAGTTGGACCTTAGGAATAGATCATTTGGCATTCCTGGAGCACTGACACCACCTATGGATAGATTCACCCCAAAATTCGATGATAATCATCTTGTCAACGGAATCAGACACATCGATGCCGCTCGCGACTTGGCTGATATTCAATCGATTTTGAATGTTACTTCAGCTGGCGGCCTTTTAGAGAGGCTCACTGGCACAAGAGTGTCTTTAGAAAGTTCGGTTCTAACCCCTCCTGATACCATTATCAAGGACAGAGACCAGGAGGAGACTCAGGATAATTTCGCAGCTGAGTTCAGACGTATGAAGCTGCGTGGAGAGTTCCCCTGCAGGTTGTGCCCTGCCAAGTTCCCTAACCTAAGAGCTTTGAAGGGACACAATAGAGTGCACCTGAGCGGAACGGGCCCGGGACCTTATCAGTGTAACATGTGCCCTCATGCCTCTTTAGATAAGGCTGCGTTAGTACGTCACATGCGTACACATAACGGGGACAGGCCGTATGAATGCGCCGTGTGTAATTACGCTTTTACTACCAAAGCCAATTGTGAACGTCACTTAAGGAATAGACATGCTAAAGTGACAAGAGAAGATGTGAAACGCTCCATAATATACCACCCATCTGAAGACCCTAATAATGATGAGGTAAACTCAAAACTTGCTAGGGATGAAGTAAAAAGATCACTAGCTTTCCACACCCCTGACATAGATAGGCGAAACGAAAGTTCGGGACGCGATACGCCGCTAACACACTTTCAACCGAGTTTCATCAGTGACAGACATCCAGTCACTAACTTAACCACCAAACCGTTAGCATTGCCATTACCTGAGTCGCCGCTACCTCTGCCTATGCCAAGAGAAATAGAGCAACCCCAACCTCGAATTAAAGTGAAGGGTATTGGTCAGCTAACGCAAATACCGGAGTTCAGACCACCCGAGATCACATACAAGCAAAATGATATCTTGCATGATACTAACGATGAAGAAGTGCCTATAGACTTGAGCACCAGTGACAATAATAGCTGTGATGTTCTTGATCTGAGCAAGAAGAAACGTGACACTGATTCTGAGGAACTTAAAGCCCCAACACGTCCTTCCTTCGAGCCTGACGCAGCGAGCGTAGCCGCTTCAGCCTACGAAAAGACAAGATTCCTCTTAGCTTCTCAAAGACTCTTTGAGAACTCTCTTCCAAAAATAGATCCCGCTTACTATGCCACCCAATTGTCGCAACTGTACGCCGGCACAGTTCCTGGAATCCCAGGCTTACCTTTGCCACCATCCTTTCCTATCGCCCCTTACTTACCTTCATTTTTTCCACACCCAAATGATTCCCAGGAACTTGCCGAGATAAAACATCACATACAAAAGGAGATAATTCGAGGCTTGAGTATGTCTGGTGGCAGACTGGTTCCAAATGACCAGGATAGTCAGCCTAAGATTGAACCCGAGGAAGAGGAACAAAAACCACCGCCATCGGTCTCTCCAATATCTTCGCCACACCCTGAATCTCCACGCCCACAGATGAATAACACTCTCGTCCCGCAAACGGACTCCGTGAAGATGGTCATAAAAAACGGTGTTCTAATGCCAAAGCAAAAACAAAGGAGGTATAGAACAGAAAGACCTTTTTCTTGTTCTCAATGTTCAGCCCGGTTTACCCTACGATCTAACATGGAACGCCACGTAAAGCAGCAACATCCTCAGCACTGGAGTGTGAGGCGACCAAATCCGAGAGCGCCCCCACCGTACCCAACATCCGACTCACTGACTGATCGGATGAAATTCGCCTTGCTGGCTCGTCATCTTGAAAGGCCCTTGCAACAATCTGAGCGCTCGCCTGTCCGACGAGATTCGGATGAAGTAGCTGACAATGAGGAAGATGAAGAAGATACCCTAGTCATAGATGAGGAGCCTGACCAGGACGACAAAGCGGAAGACCACACCGCGGCGCGCCGTGCGGCAGCTGAAATCCTAATGGCTACGTGCCAACAGGAAATGACTAAGGATTTCGACCTTAAAATCGCTGGGAATTTAATCAATAAGCCTGTTCCCATTACCAGTGATAAGTTAGAATCTGGAACAAATTCGGTGTCGCCGACTCAAGAACCACTACCTATTCCGGTGGTACCGACTCGCAGTGATGAGGAAGAAGATGAAGAGGGTCTAGTCGCCTCCACAAGCGAGGGAAACAACTCTGGCAGCGATGAGAATAAGTCAGAAACCGACACAGCGCTCCCACCGAAGAAAAAATCTGCGTACAGCCTAGCTCCCAACAGAGTATCATGTCCCTACTGCCATCGCAAGTTCCCATGGTCATCATCATTGCGTCGCCACGTCCTCACGCACACTGGACAGAAACCCTTCAAGTGCCCTCACTGCACACTCCTCTTCACCACCAAGTCCAACTGTGACCGCCATCTTTTAAGGAAGCATGGAGCATCATCCGCCAGAGCTGTCCTGGCTGAACCAATCCTGAATGATACTGTATCCCCACCACAACCAATCAATGATTCAAGAGCAGTGCCAGAAAGGCCTTACAAATGCGCTTCGTGCCCAACAAGCACATTTTCGTCCCTCGACACTTTAAAGAAGCATATGTTTTCAAGGCACGGGTCTGACTCTCAACCAGGCTCCCCAAACCCAGAGATAGTGGAAGATACCAACGAAGGTGGTCTAGTCTTTAAATGCCATCTATGCGAGGCCTCTTTTGGTGACAGGAGTGGAGCCCTATCACACTTGGCATCTGGACATACGGCGGAATATGAGCAGTTGGTGAGCAAGGGAGCCTTGGATGCAGCTAGTGATCGGAGTGAAagcgctgatgatgatgagagggGGAAGTTTCCTGACCATGCTAACAGAAAGGTGGTCTGTGCCTTCTGTATCCGTCGATTCTGGTCAGCAGAGGACCTCCGTCGTCATATGAGGACTCATTCAGGAGAGAGGCCCTTCGCTTGTGACCTCTGCCGTCGTCGCTTCACGTTGAAACACAGCATGTTGCGACATCGTAAGAAGCACAGGGAAGAGATCACTGATGATGAGGAAGTTTCCCCTCCGCACACACCGCTTGAAGATGCTGTCACTAATGGGTACCATTATCAAGACGACGACGGCTCAGGCAACGAGATCCCGAGCAATGTCAACAACAATAATTCCCCTCCCTCCGCTCCATACGAAAAAAAGCTCAAACTGGACATGACGTCCCGAAAATATTCGTCGGAGGCTGAAAATGATGCAGAAAACAGTGACCTCATTGGGAAACTACTCGGCATCCCTGACAAAACCATCAACAAGCTACTCTCATCCGCAGACGAGGCCGCGAAAATCCTTGGCGTGAATAAATGA
Protein Sequence: MQGAATAPAPPAAEPPSSQQIKTEEALCEAKIEADEKMDAVQIEKQELRVTRTTSIDSDNRSDRSEEEDLRRARKRAASTSPSLMPMDKRTARFECPKCRQRFDSVNAFDIHRFTAHSDDTKTGFDDLTFVDFSSKKFPEIARGVCERNPHVSVTDQRYRCDMCCRDFPCGQALDIHRKSCLTATRIPSPERDRREDFFAKLDLRNRSFGIPGALTPPMDRFTPKFDDNHLVNGIRHIDAARDLADIQSILNVTSAGGLLERLTGTRVSLESSVLTPPDTIIKDRDQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDEVKRSLAFHTPDIDRRNESSGRDTPLTHFQPSFISDRHPVTNLTTKPLALPLPESPLPLPMPREIEQPQPRIKVKGIGQLTQIPEFRPPEITYKQNDILHDTNDEEVPIDLSTSDNNSCDVLDLSKKKRDTDSEELKAPTRPSFEPDAASVAASAYEKTRFLLASQRLFENSLPKIDPAYYATQLSQLYAGTVPGIPGLPLPPSFPIAPYLPSFFPHPNDSQELAEIKHHIQKEIIRGLSMSGGRLVPNDQDSQPKIEPEEEEQKPPPSVSPISSPHPESPRPQMNNTLVPQTDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPNPRAPPPYPTSDSLTDRMKFALLARHLERPLQQSERSPVRRDSDEVADNEEDEEDTLVIDEEPDQDDKAEDHTAARRAAAEILMATCQQEMTKDFDLKIAGNLINKPVPITSDKLESGTNSVSPTQEPLPIPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSETDTALPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCTLLFTTKSNCDRHLLRKHGASSARAVLAEPILNDTVSPPQPINDSRAVPERPYKCASCPTSTFSSLDTLKKHMFSRHGSDSQPGSPNPEIVEDTNEGGLVFKCHLCEASFGDRSGALSHLASGHTAEYEQLVSKGALDAASDRSESADDDERGKFPDHANRKVVCAFCIRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREEITDDEEVSPPHTPLEDAVTNGYHYQDDDGSGNEIPSNVNNNNSPPSAPYEKKLKLDMTSRKYSSEAENDAENSDLIGKLLGIPDKTINKLLSSADEAAKILGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: iTF_01533483;
80% Identity: -