Ogot023783.1
Basic Information
- Insect
- Orthosia gothica
- Gene Symbol
- -
- Assembly
- GCA_949775005.1
- Location
- OX459040.1:32873374-32966699[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.1e-12 2.4e-07 32.5 0.7 3 114 36 147 33 181 0.71 2 4 3.9e-06 0.3 12.4 22.3 346 504 180 325 162 344 0.67 3 4 1 7.8e+04 -8.2 10.3 157 263 534 636 437 642 0.41 4 4 0.59 4.6e+04 -4.7 5.5 108 153 620 665 575 729 0.51
Sequence Information
- Coding Sequence
- ATGCACTTAATTGCGACTAAGTACGACAAGTGGGACCGGGACAGGGGTGGGGGGAGCGGCGGCGGGGGCGGCGGGTCCGGCGCGTGGGCCGGGCGCGAGCGCGAGCGCGAACGCGAACGCGACCGCGAGCGCGAGCGCCAGGCGCGCGCGCACCAGATGTCGCAGGCGCACGCCCCCGAGCCCGACGCATCGTCGCTCTTCCCGGCGCCGTTCAGGGTAACTGGCAGGCAAGATCGGGTGAGCCAGCAGATCCAGACGAAGCTCGGCGACTACCATCTCGCGCAGTGGTTCATCGATGACCCCAGTAAATCTATTGGGATCTGTGCTGAACCACCAAGTCCTGCACCATGCCCACCATCACGGCGAGAGAGCGAGTTCAAGAAGCCGTCACACGCCCCACAGAACGGCGTGCGACACCATCGCCCCCATATCCCTCACAACAAGAGCGACGGTTCCGGTTCAACGGGAGCTCCGCACAGACCGCCTCCAATCAGGATACCCAACGGTGTCCAGTCACAGAATGCTATCGATAGCAGTCAACCTCCAATTGAAAGTATTTTAAAGGAGATGAAGGCCCTACCGACGCCGTTGTCCGTGATAGCTGCGACGCCGCGGAAGGAGTTGGAGAACAAGTTCATCTTCAACCCTTACACAAATAAGGTCCAAGAGAATCCTCAGTTGGCCGCCAACGATCTCAAAACGCCCCTTCCTAAGCCCGGTTTGGACAACCGGATATCGAACTCGAGGAGTTCAGTGTCGCCTGACGTGGTGAATAAGGACCTCGGCTTATCGGAGAGCGATGACGAGGTCGCCAACCCACACGCGATAGGACCGCCTATATCACCAATCGGGTCAGGCAGCCCTACCTCAGGTAGTTCATCACCTTCCGACTCAGGATCGGAGTCCTCTTCTGGGGAGTCCACGGCCCCTGCGCCGGCGCCGGCAGCGGCCCCAGCACCGGCCCCTACAGCGGCCCCTGCTGCCCCGGCGGCGCCTGCGCAGCGCAACTCCTGGAGCTTGTCAAACTTCGCGCCGCCGCCTGCGCAAATCCCCGACCAGACCTATGAGTCGGGGAAAGATATTAGACATGCGCTTGCTGATGTTAAGGGGAAACCGAGTCCGATCTCAGAGATGTCGGACTCGGAGGCGTCGTCACCGTCGCCAGGCGTCGTGCGGAGGAGGCGTTCTATCCCCAACCGGGTGTCTACCGCCTCTAGTGATGAGGATATGCCGACGAGGCATACGACATCACCGCGGGTGCCCCCCTCAGCGTCTGCAGGCCCAGTGAAGCGCGGGCGTCCTCCCAAGGTGCGTCCCTCTGAGGAGCGTCCCGTGAAAAAGCGTCGCGGCCGGCCGCCCAAGTCACGAGCCGCGTCCCCGCCTGCGCCGCAACCAGACCACCCGGTAGACAGCGACGTGGAGCCGGATCCGCCGCATGTTCACCATCCGCTGCAGGACACCAAGACGCATATCTTTCGCAAGGTTTTCACCCCGAAGAAAAGCGATGAATGCGGTGGAAAGGGTGGTAAAGGTGGCAAAGGAAAGGGAGGAAAAGGCAAGGGGCAGGTGACTATCATCGAGGTCACTGCACCCGAAGCCGATGAGGAAGAGAGAAGGCATCGCGAGCGGTCCGCTGAGCGACGCAACGAGGAGGCTATGGCACGACTGTCGCCGCACGAGCCTGAGCGCCGGGCCTCGGACCGCCTGTCTGTAGAGCGACAGTCGCGCCGCTCCGCCGAACGCCGCGCGCCCAAAGAACGCCCCAGCGACCACAACATCGAGCGGATACCCGAGCGGACCTCCTACGACAGGATACCCTCCGATCGGATACCCACCGAGCGCACCTCCAACGACCGGATACCCGAGCGACCCGTCGATCGGATATCGACGGAACGCACCTCCACGTCCTCTTCAGCCAGCGACCGACTCTCAGGCGACAGGCTTTCCGGCGGTCTATCCTCAGACCGGCGGTCAACGGAGCGATCGAGCGAGAAAATCGATCGGTTGCCGAGTGAGAAGATGTCGATAGACAGGATCCGTGAGAGATCTCACGATCGGTTATCAGGGGAGAGGAACGAGAGGATAGCGGGAGAGAAGTTGTCGCACGACCGTCTTCCGGATGTGAAGCCTCGGTTGTCCGACAGTAAGTTGGCGTTGGACAGGCTTGAGAGCAAGGTGCTCGACAAGCCCGTCGATCGGATCCCGACGGAGCGGTATGTGCGCGCGGAGGCCGATGTTGGGTCGGGACTCAAGTCCGGCCGCGGCTCGGAGAGGCTTGAGGAAGCGTCTTCTAACGTGGCCCGTCCCCGCTCCCGGCTGCTGGTGCGCGTGCCGCTGTGCCGCCTGCGCGCCGACACAGTGCGCAAGCTGCAGCGACCGCCCCGACACGCCGTGCCCAAGCGACCCAGTACGCCGCATCCTGAACAGGGCGGCGAGGTAGCAGCGACGAACCACGAGCGGACGGACACTACGTACGCGGGACAGACGCCTATCTACTTCTCGTACTTCGAGCGGCTGCCCGCAGACGCTCTGTCCGACGAGGAGAGGGATCACAAGTACTACTTAGAAGAGGCCACGCGCCTGCGCACGGCCGCTGAGAAGGAACAGGAGCCTCTGCCTCGCGTCATGCTGTACCTGGAGTCAGTTCTGTGCTTCGTGCTCACCGGCCGAGTGCTGGAGCTGGAACTGGACACGAAAGGCGCCTTCACCATCTACCGGGAAACTATCGAGTACATCAAGAGTATACACTCGATGCCGCAGCGATTTAGGGCCTCGCCGCATGATACTTTCAACAAACTTGATATTCTCagCCTGAGAGTGCAAGCCCTACTGTACCTGCGCATGTTCAAGATGTACAACCGAGAGGTGAAGGAGTACAACAAGATCGTCCACGAGTACCAACAGAAGCCAGCCCTCGCGGAGTCCGTGTCCCCCCTGTCCCCCACCCCGTCCCCGGCCGGCTCGGTGGGCTCGGTGGGCTCGGGCTCGGCGTCGTCCGGCTACTGCTCGCTGGCGCACTCGGTGCCGGCGCACGCGCACCAGGCGCTGCTGCTGCTGAACAAGTACTACGCCTTCCTGTATGTGGCGCACGACTTGTGGGAGCAGGCCGACTCGCTGTGCAGGCTTAGGGCTAATAGAGATCTGTTCATAGCAGTGGACCGCAAGTGTGGGCCGCTCTCCCTGTCGTCTACGTTCCGTCACCTCGTGCAGTACGTGCGCCACGCCATCTCGCTACTGAAGAATGCGCCGCGAGAGTGA
- Protein Sequence
- MHLIATKYDKWDRDRGGGSGGGGGGSGAWAGRERERERERDRERERQARAHQMSQAHAPEPDASSLFPAPFRVTGRQDRVSQQIQTKLGDYHLAQWFIDDPSKSIGICAEPPSPAPCPPSRRESEFKKPSHAPQNGVRHHRPHIPHNKSDGSGSTGAPHRPPPIRIPNGVQSQNAIDSSQPPIESILKEMKALPTPLSVIAATPRKELENKFIFNPYTNKVQENPQLAANDLKTPLPKPGLDNRISNSRSSVSPDVVNKDLGLSESDDEVANPHAIGPPISPIGSGSPTSGSSSPSDSGSESSSGESTAPAPAPAAAPAPAPTAAPAAPAAPAQRNSWSLSNFAPPPAQIPDQTYESGKDIRHALADVKGKPSPISEMSDSEASSPSPGVVRRRRSIPNRVSTASSDEDMPTRHTTSPRVPPSASAGPVKRGRPPKVRPSEERPVKKRRGRPPKSRAASPPAPQPDHPVDSDVEPDPPHVHHPLQDTKTHIFRKVFTPKKSDECGGKGGKGGKGKGGKGKGQVTIIEVTAPEADEEERRHRERSAERRNEEAMARLSPHEPERRASDRLSVERQSRRSAERRAPKERPSDHNIERIPERTSYDRIPSDRIPTERTSNDRIPERPVDRISTERTSTSSSASDRLSGDRLSGGLSSDRRSTERSSEKIDRLPSEKMSIDRIRERSHDRLSGERNERIAGEKLSHDRLPDVKPRLSDSKLALDRLESKVLDKPVDRIPTERYVRAEADVGSGLKSGRGSERLEEASSNVARPRSRLLVRVPLCRLRADTVRKLQRPPRHAVPKRPSTPHPEQGGEVAATNHERTDTTYAGQTPIYFSYFERLPADALSDEERDHKYYLEEATRLRTAAEKEQEPLPRVMLYLESVLCFVLTGRVLELELDTKGAFTIYRETIEYIKSIHSMPQRFRASPHDTFNKLDILSLRVQALLYLRMFKMYNREVKEYNKIVHEYQQKPALAESVSPLSPTPSPAGSVGSVGSGSASSGYCSLAHSVPAHAHQALLLLNKYYAFLYVAHDLWEQADSLCRLRANRDLFIAVDRKCGPLSLSSTFRHLVQYVRHAISLLKNAPRE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -