Onob018559.1
Basic Information
- Insect
- Orthonevra nobilis
- Gene Symbol
- sip1
- Assembly
- GCA_963555765.1
- Location
- OY743226.1:73245783-73249857[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.62 8.3e+03 -3.4 0.1 62 88 329 358 321 384 0.61 2 3 6.7e-93 9.1e-89 298.3 20.5 2 275 395 661 394 661 0.98 3 3 0.39 5.2e+03 -2.7 0.0 157 189 673 704 667 712 0.71
Sequence Information
- Coding Sequence
- atgtcgGACAATGAGTATGAGGCATTTGAAATCACCGACTATGATTTGGCCAACGAATTCAATCCGAATCGGCCTCGACGGAAACTTACTAAGAATCAACAAATTTAtgGAATTTGGGCCGACAGTGACAGTGACAATGATAGCGAGGTTGAGATGACGGGTCGACGTCGTGGCAAAGCCAAAGGACGCAGCTCGGGACCTGTTAGTTTTGTTACTGGCGGAATTCAACAGCCGGGAAGCTTTAAGAAGGCCGACAAGGACCAAGACAAGGAAGAAAACAACCAAATCACAGATGAAGATGATGAACTTCCGGTGAAACAAAGACTCAGGGGTGACGGTGGTCCTGTGCTTAGTAACTCCTCATCAGATGAAGAAAGTGCGGCGATACCAAAACGATCAGGATTCGGCATGCAACAGCCAAAACCCTCTACGAGCAGTAAGCCTGTCGGCGTTTGGGAACAACACACAAAAGGAATTGGTGCGAAGCTGTTGCTTCAAATGGGCTACAAGCCAGGCAAAGGCTTGGGTAAAGACCTCCAAGGTATATCCCAACCAGTGGAAGCGTACACACGAAAAGGGCGTGGTGCTATTGGTGCTTATGGTCCAGAAACACCAGCTACAGTTGGCGGGAAGCACAAACCTACAGAGGACAGAGATGCTTTTGAGGAACGAGAATTCAAACAAAAGCTGAACAAATGGAAAAAGGACACACCGAAAAGCGATTCGAAAAAATCTCGCTACTATTATCGCAGCGTAGAGGAGGTGATTGAAAAAGGCAAGAAAACTATAGTGCCCGATAGCCTTAGCAAAAAGCTTGGAAATGTACCTGTAATTGATATGACCGGACCTGAAAAGCGTGTCTTCAGTGGATACCATGCCATCGGCCACACGAAAATCGTCGAAGAAGAAGTGTATGATCAGAAAGGCGAAAAGAAAGCCACGAACGGATTTGCATTGCCCGAGCTAATGCACAATATAAATCTTATTCTGCACAATTGTGAACAGGAAATCATCTCCTTGGACAGAGAGGAGCGAGAAACAACTGAGAACTACGAACGCCTGGAAAAGGATAAGAAAAACCTAGAAAAAGTGGTCAAATTAGAGAAGGAGCAGATTGAGACATTGGAGAAAGCTCTGTCGTTAGTCCAAGAGTTGACTTCGAACCCAGAAAACTTGAGTTTGTCTCGTGCcgagaaaatatttattgagctGCAGCATGATTACCCCTCAGAGTACAAAGAGTTTGCCTTAGGTGATTTAGCGGCTGGAGTAATCGCTCCACTAGTCAATAATGAATTAAAGTCGTGGAAACCACTCGAAGAACCAACATTGTTTGTAAATACAATCAAAAAGTGGAGAACTATTCTCGATATGCATCATTCAGAGGAGCGAAACAATGTTTTCGATCCTTATTCATCACTGGTATGGGCTGGCGTGATTCCCAGTTTTCGAGCCGCGGTAAATGAATGGAATCCAAAGACGCATCAGAAAATGGCGGCTCTGCTGGACACGTGGGCACCATTATTTCCCACTTGGGTGTTGGACAACGTGCTGGAACAATTGGTGCTACCACGGCTTGTTATGGAAGTGAAAGAATGGGATCCGCTCACAGATACCGTGCCCATTCATAGTTGGATTCTGCCATGGAGTTCGATACTCGGACACAAGATGGAAGAGTTTATATTTCCCACAATTCGTGAGAAACTGGGCGTTGCCCTGCAAGCATGGATGCCGCAAGATCGATCTGCCCGAGCGATGCTTACGCCATGGAAAGAAGCGTTTGACGAGGATGAAATGCAGTCTTTCCTACTTAAACATATTATCCCAAAGCTGCAAATGTCGCTTAGTGAGATGATCATCAATCCACTGCAGCAGGACTTAGAACTTTGGAACCAAGTTTGGGAATGGAATGAACTGATACCGTCATGGCTGATGGCACAGATTCTCGACAAGTGCTTCTTCCCGAAATGGATGCAAGTACTCGTCTTGTGGCTAAATCAGTCTCCAGACTTTGATCAAATCTCGCGTTGGTACACTGGCTGGAAAACAGTTCTCGGCGATGAGCTGATCAAACAACCCACTATTAAGGAACACCTCCGAAGAGCATTGGAAATAATGCATAGAGCAACTGAAACGATAGCTACACCTCAACCGATACCTCCGCCAATGGCGGCACCGTCAACCTCAACATCAACCGGCCCCCCCGCGCTTATGGATCTTCAAATTACACCACCCGTCCAGCTGGAGTTCAAAGAACTTGTTTCGCAAAAGTGTGCAGAGCGGGGCATTATTTTTGCACCAATGCCTGGCCGCAGAGAATTTGGCAAGCAGGTCTATCGTGTTGGAAAACTATTCTGCTACATTGATCGGAACGTGGTGATGCTTAGCGATGGTAGCTTGAAAAACTGGACACCAAGCTCGTTGGGACTAACGATAGAAAGGGCTGTATCGGGATAG
- Protein Sequence
- MSDNEYEAFEITDYDLANEFNPNRPRRKLTKNQQIYGIWADSDSDNDSEVEMTGRRRGKAKGRSSGPVSFVTGGIQQPGSFKKADKDQDKEENNQITDEDDELPVKQRLRGDGGPVLSNSSSDEESAAIPKRSGFGMQQPKPSTSSKPVGVWEQHTKGIGAKLLLQMGYKPGKGLGKDLQGISQPVEAYTRKGRGAIGAYGPETPATVGGKHKPTEDRDAFEEREFKQKLNKWKKDTPKSDSKKSRYYYRSVEEVIEKGKKTIVPDSLSKKLGNVPVIDMTGPEKRVFSGYHAIGHTKIVEEEVYDQKGEKKATNGFALPELMHNINLILHNCEQEIISLDREERETTENYERLEKDKKNLEKVVKLEKEQIETLEKALSLVQELTSNPENLSLSRAEKIFIELQHDYPSEYKEFALGDLAAGVIAPLVNNELKSWKPLEEPTLFVNTIKKWRTILDMHHSEERNNVFDPYSSLVWAGVIPSFRAAVNEWNPKTHQKMAALLDTWAPLFPTWVLDNVLEQLVLPRLVMEVKEWDPLTDTVPIHSWILPWSSILGHKMEEFIFPTIREKLGVALQAWMPQDRSARAMLTPWKEAFDEDEMQSFLLKHIIPKLQMSLSEMIINPLQQDLELWNQVWEWNELIPSWLMAQILDKCFFPKWMQVLVLWLNQSPDFDQISRWYTGWKTVLGDELIKQPTIKEHLRRALEIMHRATETIATPQPIPPPMAAPSTSTSTGPPALMDLQITPPVQLEFKELVSQKCAERGIIFAPMPGRREFGKQVYRVGKLFCYIDRNVVMLSDGSLKNWTPSSLGLTIERAVSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -