Oale005195.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ornithoptera alexandrae
Gene Symbol
Hr39
Assembly
GCA_029030555.1
Location
JARDVY010000023.1:10275752-10290274[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3 2.7e+04 -8.9 11.3 98 150 265 319 162 358 0.53
2 3 8.5e-08 0.00076 19.6 0.1 1 20 441 460 441 474 0.91
3 3 3.8e-65 3.4e-61 208.5 0.0 164 408 503 756 471 756 0.84

Sequence Information

Coding Sequence
ATGTCAAGCGAGGGTGACACTGTGAAGGTGGAAGGGGGACACGTATCTGTCACCACAATCAGCATGTCGGGCCCGGAGACCAGCAATGGACAATTCTCGTACAGTTCGAGCGGAGTACGCATCAGCGTGTCTTCGGAACCACACGACGAAGACTCCACTGATGCCGAGATCTCAAAGATCGATTTCGCGCAACACCAATACGAGgtcaATATGAGGAACAAAAAGAAACGATCGTCGAGCGGCGCGCAATGCGACGGACAGAGCAACGAGCGGGAGCGGCCCATGTCGTGGGAGGGAGAGCTTTCCGACTCTGAAATGGTTATAGACACCAGCGTCAATAACGACGATAACAGCAGTTCAATAGACATGCAGTCGTCCCGTGACTCAATTGACACTCTGCGTAACGTAACGATCAAAACTGAACCCCTCAAGACGGAGAACTTCCACAGCCTGGACGACCAGAGAGTACTGGACCTGAAATACTCAGCACCGTTGCAGCCGCATCAAAGGAGTCTCAGTATGAATAGGATATCAGTTCTCACGGACAATACATCCTTGTCGCTCTCCCGTCGGCCGTCGTCCCCTACTAACAGCGCCAAGTCTCTGGTCCTGACCGACCAGACGATGTCGCTGATGGCGTCCAACGCGGCCGGCGAAGCGCAAAATCTGACCATCAAGAAAGAGACGCAATTATCAGaattaaaatgcGAGGCTGGTGTGGGCATGGAGAAGCTGCTGGGCCTGCACGGTTCGCCACTGCTGGGACGGCTGCCGCGCGTACAGTCTAGCGCCAGTACCGACTCCGCGGTTCATTCCATGTACACGCATAGCGTATACAGCAGTCCGTCAGCGAGTCCGCGACCAGCTCGTCACTACACGCCGTCCTTGTCGCGGAACAACAGCGACGCATCGCACTCATCGTGCTACTCCTACAGCTCGGAGTTCTCGCCCACCCATTCGCCGGTGCAGCAGAGTCGCCAGCCCCACATTATGTACCGTGAGGCGACGGCCGTGTTCCCAGCGTCGCCAGCTCACGACGACGATACGGACGCCGCGGACGAACGTCTCCACCACCACCAGGGCATCAGTCGGCAGCAGCTCATTAACAGTCCGTGCCCCATCTGCGGCGACAAGATAAGCGGTTTCCACTACGGTATATTCTCGTGTGAGTCGTGCAAGGGTTTCTTCAAACGGACCGTCCAGAACAGGAAGAACTACATGTGCTTGCGCGGCGGAAACTGTCCGGTCACCGTGGCGACGAGGAAGAAATGCCCAGCGTGCCGTTTCGATAAGTGCCTCGGCTGCGGCATGAAGCTTGAAGCGATCCGCGAGGATCGTACTCGCGGAGGTCGGTCGACGTACCAGTGCTCGTACTCACTGTCCGGTGCCGCCTCTACCGGCTCGTTGCTCTCTGCGCATGCGCCACCTACGCTGCGCCACGCCTCCAGCCTCACCTGCGTAAATGGTCCAGGATCATATAGCAGTCGAGGGGAAGCCAGTAACAGCCGATTGACACCAGACATTCCGCCATTATTGCAGGAAATAATGGACGTGGAACATCTCTGGCAGTACAACGAGTCGGAACTGAGCCGTTTGGGCAAGTCCACGGGCGCTAACCCACTGCTGGCCGCGAGCGGCATCACGCCGCACACCTCCAGCGCGGACCTACTCGCAGACCTATGTCACATCGCCGACCATCGGCTGTACAAAATAGTCAAGTGGTGCAAGAGTCTGCCTCTGTTTAAGAACATATCGATCGACGACCAGATCTGCCTGCTGATAAACAGCTGGTGCGAGCTGCTGGTGCTGTCGTGCTGCTATCGCGGCGTCAGCACACCCGGAGAGGTGCGAGtaggcggcgggcgcggcatCACCCTCCACCAGAGCGCCAAaTTCGGCCTCACACCGTGTATAGAGCGCATGTTGAGCTTTACTGATCACCTCCGGCGGCTGCGGGTCGACCGCTATGAGTACGTGGCGCTAAAGGTCATCGTGCTGCTCACTTCAGATGCGCCGGAGTTGCGTGAAGCGGAGAAAGTGCGAGCATCACAGGAGAAAGCGCTGGCGGCGCTGCAGGCATACACTGCTGCGCATTCGCCGGACACGCCCGCTAAGTTCGGTGAGCTGCTGCTGCGTATACCGGAACTGCAGCGCACTTGCCagTTCTTCATGCAAGTCGGCAAAGAAATGCTCAACCCGGCAAACAAGAGTAAAGACGGCGACGGGCCGAGTTTTAATCTACTTATGGAATTACTTCGAGGAGACCACTGA
Protein Sequence
MSSEGDTVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSEPHDEDSTDAEISKIDFAQHQYEVNMRNKKKRSSSGAQCDGQSNERERPMSWEGELSDSEMVIDTSVNNDDNSSSIDMQSSRDSIDTLRNVTIKTEPLKTENFHSLDDQRVLDLKYSAPLQPHQRSLSMNRISVLTDNTSLSLSRRPSSPTNSAKSLVLTDQTMSLMASNAAGEAQNLTIKKETQLSELKCEAGVGMEKLLGLHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRPARHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQQSRQPHIMYREATAVFPASPAHDDDTDAADERLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLSAHAPPTLRHASSLTCVNGPGSYSSRGEASNSRLTPDIPPLLQEIMDVEHLWQYNESELSRLGKSTGANPLLAASGITPHTSSADLLADLCHIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLHQSAKFGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTAAHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKSKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00042698;
90% Identity
iTF_01139641;
80% Identity
iTF_01115782;