Oale015673.1
Basic Information
- Insect
- Ornithoptera alexandrae
- Gene Symbol
- retn
- Assembly
- GCA_029030555.1
- Location
- JARDVY010000077.1:7094155-7101716[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-19 4.3e-16 59.6 0.0 17 89 57 127 53 127 0.95 2 2 8.2 1.8e+04 -3.3 0.0 25 38 246 259 233 264 0.72
Sequence Information
- Coding Sequence
- ATGCGATTTGGCACGTTTGGCACGCTCTCCCGGCTTTACGGCCCTTACCAAGTGCGCCGTAAAGGGTTTTACAGCCGCGGACGGAGCGCGCGCAACGATCTGACACACGGCGCTGCGTTCGCTCGTTTCCTTCCACTATCCATCGCTTTGATCTGCTCTTGTTACTTCGGCACTCCCATAAACCGGCTTCCCATAATGGCTAAGTCAGTGCTCGATCTCTACGAGCTATACAACCTGGTGATCGCCCGCGGGGGGCTCGTGGAGGTCATCAACAAGAAGCTGTGGCAAGAGATCATCAAGGGCTTACGACTACCATCTTCTATCACGTCGGCCGCTTTCACACTTCGCACACAATACATGAAGTATTTATATGATTACGAGTGTGAGAAGAAGAACTTGTCGACCCGTAGCGAGCTGGACGCTGCCATCGAAGGTAACAAACGCGAAGGTCGACGCGCTTCCGGACAGTACGATGCCCAGGCCGCACTTGCTATGCCGTCGCTGAACCGTGGTGTGTCACTTTCGATGCCGCTGGCTCAGCCGCTGGCTTTGCCACTGGGCGGCGTGCCTCGGCTGCCGATGCACGCGCCGCACCTTCACAACCACGACATAGAGTTCCGCGTGCGCGAGTACATGAAGATGATACAGCAGCAACGCGAGCTCATCAGAAACGGTTCCGAGTCACCCCCGGGTAACGGTGGTACGATGATGTCGCCCCGCGAGGCTGCGCTCAGCGCTATCGATGTATCCCGCCTCACGCTCTGGTCTCtctacaacaacaacaacaacaacaacagccCGCAGGCCGACCTCGAGCCGCAGCGtGAGGCGTTGAATCTAAGCGAGAGTCCCAATTCGAGCGGCAGCGGCGGCAAGCGTGAAGCgtgccgctcgccgccgcccCCTGCGAAGCGTCGCACGCCGCGGCCCCCTTCCCCGCGCGACACTCCACCGcggcacgcgcacgcgcacccgGCACACACAGCGCACCCAGCGCACGCGCCGCAGGTGAACGGCAGCGCGAACGGCGTCAACGGCGCCGCATTTAAAATCACAACCAGAGGTGACGCGGCCACTGGGGACCAGCAGCTCGTCGTGTCGATAGAGCTCAACGGAGTTACGTACGAAGGCGTTCTGTTCCCATCGCAAAATGGAAACGGTCAGAACGGCCACAGGCAAATGGTTTCTTAA
- Protein Sequence
- MRFGTFGTLSRLYGPYQVRRKGFYSRGRSARNDLTHGAAFARFLPLSIALICSCYFGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPSLNRGVSLSMPLAQPLALPLGGVPRLPMHAPHLHNHDIEFRVREYMKMIQQQRELIRNGSESPPGNGGTMMSPREAALSAIDVSRLTLWSLYNNNNNNNSPQADLEPQREALNLSESPNSSGSGGKREACRSPPPPAKRRTPRPPSPRDTPPRHAHAHPAHTAHPAHAPQVNGSANGVNGAAFKITTRGDAATGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154802;
- 90% Identity
- iTF_01154802;
- 80% Identity
- -