Ofri009748.1
Basic Information
- Insect
- Ornithomya fringillina
- Gene Symbol
- nfxl1
- Assembly
- GCA_963978525.1
- Location
- OZ021692.1:8001240-8004405[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 1.9e+04 -8.1 6.4 15 19 151 155 150 155 0.82 2 21 0.088 8.4e+02 0.2 0.4 4 10 186 192 185 192 0.96 3 21 9.3e-09 8.9e-05 22.5 15.5 1 18 200 216 200 217 0.98 4 21 2 1.9e+04 -4.8 2.3 6 10 243 247 242 247 0.87 5 21 3.3e-05 0.31 11.2 14.4 1 19 253 272 253 272 0.96 6 21 0.33 3.2e+03 -1.6 0.3 6 10 297 301 296 303 0.90 7 21 1.1e-06 0.011 15.9 15.2 3 19 309 325 301 325 0.88 8 21 0.82 7.8e+03 -2.9 0.5 1 8 350 356 349 357 0.50 9 21 1.2e-08 0.00011 22.2 12.4 1 18 360 377 360 378 0.96 10 21 0.19 1.9e+03 -0.9 0.7 1 5 387 391 387 396 0.75 11 21 2 1.9e+04 -5.0 2.3 5 10 401 406 401 406 0.91 12 21 2.4e-05 0.23 11.6 14.7 1 18 412 429 412 430 0.98 13 21 5.6e-11 5.4e-07 29.6 14.1 1 19 439 457 439 457 0.98 14 21 2 1.9e+04 -4.8 15.9 4 19 497 512 494 512 0.83 15 21 0.07 6.6e+02 0.6 5.3 3 11 525 533 515 534 0.84 16 21 0.32 3.1e+03 -1.6 0.9 6 10 594 598 593 598 0.90 17 21 3.8e-06 0.036 14.2 4.8 1 12 604 615 604 615 0.97 18 21 2 1.9e+04 -7.2 4.9 1 10 628 635 628 635 0.68 19 21 0.00055 5.3 7.3 16.7 3 19 644 660 643 660 0.92 20 21 2 1.9e+04 -5.5 2.1 9 13 666 670 665 670 0.72 21 21 3.2e-06 0.03 14.4 13.3 1 17 711 729 711 731 0.86
Sequence Information
- Coding Sequence
- atgagtAGTAATAAAAATAGCGAACAAAAGTTTTTTGAATCGCACGCTAAAAATTTGGAAGCAGCACAAAAACTTGTAGAAGAATATGCTTCATCATCAGAGGATGAAGAGCATTTGGATGAATCTAAAATAATAGAATCTTTATATCAGCATTACACTCTAAGGAAAGAAAATGAACAActattacaaaaaaccaccAGTTTTctagaaaatatattacattcGGGTGCAGCTACTTGTCTCATATGTATAGCGAGTATCAAAAGAGCTGATGAAATATGGTCTTGTCAATATTGTTACTGTTTCTTTCACTTAAATTGTATACGTCGCTGGGCTAATGATAGTATTGCCCAGGCGCAGCATAAAGCACAAAATCATTCGTCACAGGGTTACTACAATCATTTGGGTGAATTTGTTCCGCCCAAAAAAGCAAAGCCTTTGCATTGGTGTTGTCCACAATGTCGAAAGGAATTTACTCCGGCCGAGAGACCCAACCATTATGAATGTTTTTGTGGCAAAGAATTGAACCCCGTGCCGCAGCCATGGTTGGTGCCACATTCATGCGGGGAATTATGTGGTAAAGATCTAAAACCAAATTGTGGTCACAAATGCAACTTACTTTGCCATCCTGGACCGTGTCCACCTTGTGCCCAATATGCTATCACATCATGCAAATGCGGAAAATCCCCACCAAAGTCAATGCGATGTTTGGAAAAGGAATGGGAGTGCAAGCAAAagTGCAAGCAGCTACTGCCTTGTGGCCAGCATGTATGTAACAAAATTTGTCACAAACCCAATCAATGTCCGCCGTGCACTCAAACTAGTGTACAGTTCTGTGAGTGTGGTCGGGAGTCTATGGAGCGCCAATGTTGGGATTTAAAATGGCATTGTAAACAGGTTTGCGGTAAATTGCACTCATGCAAGGTACATACCTGTaaaaaagtttgtcattctggtGACTGTGGTGATTGCCCCTTGAGTTTGCCACGTTTTTGTCCATGCGGAAAAACTaaaaaaattgttccttGTTCAGAGGTAATTGAAACATGTGGCGATACATGCCAGAAAGTTTTAGATTGTGGTCAGCATACTTGTACCCAAAGGTGCCATAAAGGCAATTGCAATATGTGTTTACTTATAGTGAAGAAACGATGCCGTTGTGGTCAACACGAAAAAGAGTTGCCTTGCTCCAAAGAATTTACCTGTGAAACCAAGTGTAAGCAAATAAGAGATTGCGGTAAACATGCTTGCAATCGAAAGTGTTGTGATCGAAATTGCCCACCTTGTGACAAAATATGCAACAAACCCTTATCCTGTGGCAAACATAAATGTCAATCGGTGTGTCACAAAGGTCCTTGCTACCCATGTCGTCTACAATCTCAAATAAATTGTCGTTGCGGTAAAACGCGTAAAAGTGTACCATGTGGACGAGAACGTACCGCGCGCATAATATGTTCAGAATCATGCAGAATACCCTCCAAATGTCATCATACAAATAAACATCGCTGCCACAAGCATGAATGCCCGCCTTGCACCCAAATGTGCGGTCTGCCAAATGATACTACCGGTTGTAAACATATTTGTAAAGCAAAATGTCATAATGCTGTAAAACATGTAACGTTTGCAGACAATAATCAAACAAACAATGCTTGGAAAGCAACCAAAGTgactgAATACAAGGTGGCGCCGCATCCGAAATGTGAAGAAAAAGTTAATGTGGATTGTATCGGGGGACATGAAACAGCTGAATGGCCCTGCTGGAATTCAAAACCAACATCTTGCCAACGTTTATGTAATCGTAATCTGTCTTGCGGCAATCATAAGTGTGCTCTGTTGTGCCATTCAGTGGCCAATCCAAACGATATGAGTGCTCAAGATGGTTGCGGTGCATGCGAAGAAGGTTGCCTTATAGAACGACCCAACGGTTGCACGCATAAGTGCATCAAACCTTGTCATCCACCACCATGCAATCCCTGCAGCATGGCCATCAAAACTAAATGCCACTGCGGCCTAATAGAAGTGATTTGCAAGTGTTGTGACTTTTATAAAATCGATGGCAGCAAAGAGGAAATCGCTGAAAACCAGGACCGCCTAAAGAGTTGCGGTAACcgatgtttaaaaaatTATCCGTGTGGTCATCGTTGTGTGGCCAAATGTCATTCGGGTCCCTGTCCCAACCCCGAACAATGTCGCAAAAAGTTACGCATCCATTGCCCCTGCAGACGACAAAAACAAGACATATCTTGTGATAAATATCGGGGAGGCTTTATAAAATTGGAATGTGACGGGATTTGTGTCGAAACGATCAAAACTTTGGAATCATACCGACAAGCGGAGGAACAGTTAATGCGCGATCAAGAAGCGGAACGTAATCGTATGGAATTGGAACaatttgaaaagaaattcACCAAACGTAAACCCCGAGAGCGTAGAATCATTGAAATGAAAGACAAGAAACCAATCGACTGGCAACTGGTGATTGTGTATTCGGTTACTTCAGCTGCCATTCTACTAGCCATCATTTTAGCTTTTTATGAGGaaaattaa
- Protein Sequence
- MSSNKNSEQKFFESHAKNLEAAQKLVEEYASSSEDEEHLDESKIIESLYQHYTLRKENEQLLQKTTSFLENILHSGAATCLICIASIKRADEIWSCQYCYCFFHLNCIRRWANDSIAQAQHKAQNHSSQGYYNHLGEFVPPKKAKPLHWCCPQCRKEFTPAERPNHYECFCGKELNPVPQPWLVPHSCGELCGKDLKPNCGHKCNLLCHPGPCPPCAQYAITSCKCGKSPPKSMRCLEKEWECKQKCKQLLPCGQHVCNKICHKPNQCPPCTQTSVQFCECGRESMERQCWDLKWHCKQVCGKLHSCKVHTCKKVCHSGDCGDCPLSLPRFCPCGKTKKIVPCSEVIETCGDTCQKVLDCGQHTCTQRCHKGNCNMCLLIVKKRCRCGQHEKELPCSKEFTCETKCKQIRDCGKHACNRKCCDRNCPPCDKICNKPLSCGKHKCQSVCHKGPCYPCRLQSQINCRCGKTRKSVPCGRERTARIICSESCRIPSKCHHTNKHRCHKHECPPCTQMCGLPNDTTGCKHICKAKCHNAVKHVTFADNNQTNNAWKATKVTEYKVAPHPKCEEKVNVDCIGGHETAEWPCWNSKPTSCQRLCNRNLSCGNHKCALLCHSVANPNDMSAQDGCGACEEGCLIERPNGCTHKCIKPCHPPPCNPCSMAIKTKCHCGLIEVICKCCDFYKIDGSKEEIAENQDRLKSCGNRCLKNYPCGHRCVAKCHSGPCPNPEQCRKKLRIHCPCRRQKQDISCDKYRGGFIKLECDGICVETIKTLESYRQAEEQLMRDQEAERNRMELEQFEKKFTKRKPRERRIIEMKDKKPIDWQLVIVYSVTSAAILLAIILAFYEEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01114687;
- 90% Identity
- iTF_01114687;
- 80% Identity
- -