Ochl018099.1
Basic Information
- Insect
- Ornithomya chloropus
- Gene Symbol
- nfxl1
- Assembly
- GCA_963971445.1
- Location
- OZ020532.1:3452086-3455253[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 2.4e+04 -8.1 6.4 15 19 151 155 150 155 0.82 2 20 0.088 1e+03 0.2 0.4 4 10 186 192 185 192 0.96 3 20 2.2e-08 0.00026 21.3 15.1 1 18 200 216 200 217 0.98 4 20 2 2.4e+04 -4.8 2.3 6 10 243 247 242 247 0.87 5 20 2.9e-05 0.34 11.4 13.6 1 18 253 271 253 272 0.97 6 20 0.38 4.5e+03 -1.8 0.5 6 10 297 301 296 305 0.91 7 20 1e-06 0.012 16.0 15.2 3 19 309 325 301 325 0.87 8 20 0.82 9.7e+03 -2.9 0.5 1 8 350 356 349 357 0.50 9 20 1.2e-08 0.00014 22.2 12.4 1 18 360 377 360 378 0.96 10 20 2 2.4e+04 -5.0 2.3 5 10 401 406 401 406 0.91 11 20 2.4e-05 0.28 11.6 14.7 1 18 412 429 412 430 0.98 12 20 5.6e-11 6.6e-07 29.6 14.1 1 19 439 457 439 457 0.98 13 20 2 2.4e+04 -4.8 15.9 4 19 497 512 494 512 0.83 14 20 0.0023 27 5.3 5.9 3 11 525 533 515 534 0.84 15 20 0.32 3.8e+03 -1.6 0.9 6 10 594 598 593 598 0.90 16 20 3.8e-06 0.045 14.2 4.8 1 12 604 615 604 615 0.97 17 20 2 2.4e+04 -7.2 4.9 1 10 628 635 628 635 0.68 18 20 0.00055 6.5 7.3 16.7 3 19 644 660 643 660 0.92 19 20 2 2.4e+04 -5.5 2.1 9 13 666 670 665 670 0.72 20 20 9.9e-06 0.12 12.8 12.1 1 16 711 725 711 731 0.88
Sequence Information
- Coding Sequence
- atgaaTACTAATAAAAATAGCGAACAAAAGTTTTTTGAATCGCACGCTAAAAATTTGGAAGCAGCACAAAAACTAGTAGAAGAATATGCTTCATCATCAGAGGATGAAGAGCATTTGGATGAATCTAAAATAATAGAAACTTTATATCAGCATTACAGTCTAAGGAAAGAGAATAAACAACTATTAGAAAAAACCACCAGTTTTctagaaaatatattacacTCGGGTGCGGCTACTTGTCTCATATGTATAGCAAGCATCAAAAGAGCTGATGCAATATGGTCCTGTCAATATTGTTACTGTTTCTTTCACTTAAATTGTATACGACGCTGGGCTAATGATAGTATTGCCCAGGCGCAGCACAAAGCACAAAATCATTCATCACAGGGTTACTACAATCACTTGGGAGAATTTGTTCCGCCCAAAAAACCAAAGCCTTTGTATTGGTGTTGTCCACAATGTCGAAGGGAATTTACTCCGGCCGAGAGACCCAACCATTATGAATGTTTTTGTGGCAAAGAATTGAACCCCGTGCCACAGCCATGGTTGGTGCCACATTCATGTGGGGAATTATGTGGTAAAGATCTAAAACCAAATTGTGGTCACAAATGCAACATACTTTGCCACCCTGGACCGTGTCCACCTTGTGCCCAATATGCTAGCACATCATGCAAATGCGGAAAATCCCCACCAAAGTCAATGCGATGTTTGGAAAAGGAGTGGGAGTGCAAGCAAAagTGTAAGCAGCTGCTGCCTTGTGGCCAGCATGTATGTAACAAAATTTGTCATAAACCCAATCAATGTCCGCCATGCGCTCAAACTAGTGTACAGTTCTGTGAGTGTGGGCGGGAGTCTATGCAGCGCCAATGTTGGGATTTAAAATGGCATTGTAAACAGGTTTGCGGTAAATTACACTCGTGCAAGCTGCATACGTGTAAAAAAGTTTGTCACTCTGGTGATTGTGGTGATTGCCCTTTGAGTTTGCCACGTTCTTGTCCATGCGGAAAAACTaaaaaaactgCTCCTTGTTCGGAGATAATTGAAACATGTGGCGATACATGCCAGAAAGTTTTAGATTGTGGTCAGCATACTTGTACTCAAAGGTGTCATAAAGGCAATTGCAATATGtgtttACTAACAGTGAAGAAGCGATGCCGTTGTGGTCAACGCGAAAAAGAATTGCCTTGCTCCAAAGAATTTACATGTGAAACCAAGTGTAAGCAAATAAGAGATTGCGGTAAACATGCTTGCAATCGAAAGTGTTGTGATCGCAATTGCCCACCTTGTgataaaatatgcaacaaacACTTGTCCTGTGGCAAACATAAATGTCAATCGGTATGTCACAAGGGTCCTTGCTACCCATGTCGCCTACAATCTCAAATAAATTGTCGTTGTGGTAAAACTCGTAAAAGTGTACCATGTGGACGAGAACGTACCGCACGCATAATATGTTCAGAATCATGCAGAATACCCTCTAAATGTCATCACACAAATAAACACCGCTGCCACAAGCATGAGTGCCCGCCTTGCACCCAAATATGCGGTCTGCCAAATGATACTACCGGTTGTAAACATACTTGTAAAGCAAAATGTCATAATGCTGTAAAACATGTAACGTTTGCGGAcaataatcaaacaaacaGTGCTTGGAAAGCAAACAAAGTGactgAATACAAGGTGGCACCGCATCCGAAATGTGAAGAAAAAGTTAAGGTGGCTTGTGTAGGGGGACATGAAATCGCTGAATGGCCCTGCTGGAATTCAAAACCAACATCTTGTCAACGTTTATGTAATCGTAAGCTGTCTTGCGGCAATCATAAATGTGCTCTGTTGTGCCATTCAGTGGCCAATCCAAATGATATGAGTGCTCAAGATGGTTGCGGTGCATGTGAAGAAGGCTGCCTTATAGCACGACCCAAAGGTTGCACGCATAAGTGCATCAAACCTTGTCATCCACCACCATGCAATCCTTGCAGCATGGCCATCAAAACTAAATGCCATTGCGGCCTAATAGAAGTAATTTGCAAGTGTTGTGACTTTTATAAAGACGATGGCACCAAAGAGGAAATCGCTGAAAACCAGAACCGCTTAAAGAGTTGTGGTAACCGATgcttaaaaaatTATCCGTGTGGTCACCGTTGCGTGGCCAAATGTCATTCGGGTCCCTGTTCTAACCCCGAACAATGTCGCAAAAAGGTACGCATCCATTGTCCCTGCAGACGACAAAAACAAGACATACCTTGTGATAAATATCGGGCCGGCTTTATAAAATTGGAATGTGACGGGATTTGTGCCGAAACGATCAAAACTTTGGAATCAAGCCGACAGGCAAAGGAACAATTAATGCGTGATCAAGAAGCGGAACGTAATCGTATGGAATTGGAACaatttgaaaagaaattcATCAAACGTAAGCCGCGAGAGCGTAGAAgcattgaaatgaaaaacaagATAGTAATCAATTGGAACCTGGTGGGTGCATATGTGGCTATTTTGGTTGCCATTCTACTAGCTATCATTTTAGCTTTTTATgaggaaaattaa
- Protein Sequence
- MNTNKNSEQKFFESHAKNLEAAQKLVEEYASSSEDEEHLDESKIIETLYQHYSLRKENKQLLEKTTSFLENILHSGAATCLICIASIKRADAIWSCQYCYCFFHLNCIRRWANDSIAQAQHKAQNHSSQGYYNHLGEFVPPKKPKPLYWCCPQCRREFTPAERPNHYECFCGKELNPVPQPWLVPHSCGELCGKDLKPNCGHKCNILCHPGPCPPCAQYASTSCKCGKSPPKSMRCLEKEWECKQKCKQLLPCGQHVCNKICHKPNQCPPCAQTSVQFCECGRESMQRQCWDLKWHCKQVCGKLHSCKLHTCKKVCHSGDCGDCPLSLPRSCPCGKTKKTAPCSEIIETCGDTCQKVLDCGQHTCTQRCHKGNCNMCLLTVKKRCRCGQREKELPCSKEFTCETKCKQIRDCGKHACNRKCCDRNCPPCDKICNKHLSCGKHKCQSVCHKGPCYPCRLQSQINCRCGKTRKSVPCGRERTARIICSESCRIPSKCHHTNKHRCHKHECPPCTQICGLPNDTTGCKHTCKAKCHNAVKHVTFADNNQTNSAWKANKVTEYKVAPHPKCEEKVKVACVGGHEIAEWPCWNSKPTSCQRLCNRKLSCGNHKCALLCHSVANPNDMSAQDGCGACEEGCLIARPKGCTHKCIKPCHPPPCNPCSMAIKTKCHCGLIEVICKCCDFYKDDGTKEEIAENQNRLKSCGNRCLKNYPCGHRCVAKCHSGPCSNPEQCRKKVRIHCPCRRQKQDIPCDKYRAGFIKLECDGICAETIKTLESSRQAKEQLMRDQEAERNRMELEQFEKKFIKRKPRERRSIEMKNKIVINWNLVGAYVAILVAILLAIILAFYEEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00384966; iTF_01115404;
- 90% Identity
- iTF_00384966; iTF_01115404;
- 80% Identity
- -