Basic Information

Insect: Ornithomya fringillina
Gene Symbol: znf711
Assembly: GCA_963978525.1
Location: OZ021690.1:46241209-46258117[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2.5 1.9e+02 2.9 2.0 3 21 479 497 477 501 0.91

2 13 6e-05 0.0044 17.5 1.7 3 23 524 545 522 545 0.96

3 13 0.0061 0.45 11.2 0.2 1 23 562 585 562 585 0.95

4 13 0.54 40 5.0 2.2 1 23 590 614 590 614 0.92

5 13 1.5 1.1e+02 3.7 0.0 1 21 675 695 675 696 0.93

6 13 0.081 6 7.6 0.1 2 23 722 743 721 743 0.96

7 13 0.0057 0.42 11.3 4.1 2 23 755 775 754 775 0.95

8 13 0.0026 0.19 12.3 5.9 1 23 781 804 781 804 0.97

9 13 4.4e-05 0.0033 17.9 7.1 1 23 820 843 820 843 0.97

10 13 0.64 48 4.8 0.3 1 23 851 875 851 875 0.95

11 13 0.023 1.7 9.3 1.6 1 23 880 905 880 905 0.97

12 13 0.0018 0.13 12.9 4.9 1 23 917 939 917 939 0.98

13 13 0.18 13 6.5 1.4 1 16 945 960 945 961 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2.5	1.9e+02	2.9	2.0	3	21	479	497	477	501	0.91
2	13	6e-05	0.0044	17.5	1.7	3	23	524	545	522	545	0.96
3	13	0.0061	0.45	11.2	0.2	1	23	562	585	562	585	0.95
4	13	0.54	40	5.0	2.2	1	23	590	614	590	614	0.92
5	13	1.5	1.1e+02	3.7	0.0	1	21	675	695	675	696	0.93
6	13	0.081	6	7.6	0.1	2	23	722	743	721	743	0.96
7	13	0.0057	0.42	11.3	4.1	2	23	755	775	754	775	0.95
8	13	0.0026	0.19	12.3	5.9	1	23	781	804	781	804	0.97
9	13	4.4e-05	0.0033	17.9	7.1	1	23	820	843	820	843	0.97
10	13	0.64	48	4.8	0.3	1	23	851	875	851	875	0.95
11	13	0.023	1.7	9.3	1.6	1	23	880	905	880	905	0.97
12	13	0.0018	0.13	12.9	4.9	1	23	917	939	917	939	0.98
13	13	0.18	13	6.5	1.4	1	16	945	960	945	961	0.95

Sequence Information

Coding Sequence: ATGGATGACACCCATCTGTGCATTAGGTGTAGTGCAACCATAGTTGGTCTGGAAAATTATATAGAGCATCGCAAACGCAATTGTTGCTTGGTTAATGTGTCACCAAATGATGCAAAACTTCCCGCCATTGTGGTAACAAGCAGTAGTGAACAAGATGTCGAAGGGTCACCATCTGTCATATCCTATGAAGGGTATCATTTTGTTGAGCCCGGGACCGCAACTAATGCCAGTCCCGGCAACAAATCGACAAAATCTTTAACGGACAGCTATGATTTACATTATGAGTTGGGAGCCGATGTGTTCTTCTCCTCTTTGCAACTGCAAAGTGTCCAGCCATCTACTAGTGGGGGTAAAACACCTACAAGTAGCCAACCCGGTCAATTGCATCGTTCAAAATCTGTAACACAAGATTCTCATATGGAGGACAGCTGGCTTGTCAGGAATGCCACTCCACCGGTTACACAACATGACAGTGAGGGTCTCTTGAACGTTGTTACCGCCATAGAGGaatcaaaaaaatcatttgaaaCCATTTTTCAACCAATTGTCTATGAGCACGAATCACCAGATGTTACAGACGAAGAGGATGAAGAAGAAATGGATATGGAAATGGAAgacgatgatgacgatgagGATTATGATCCTGTGATGGAAAAGTCTATAATACAGCAACATTCCCCACCTGTAGTCCCGGTAAGTCACACAGGGGGAAAGTGGAAACCTGAAAATCGTCCCAACTTAAGCGTAGCTCACTCGCAGCTCCCCCGCTTATCCCCAACTTCGGATGATCAAGAAGATTTGGAAGGTAATGAAGAACAGCACCCACCCCCCCATTATACTAAAGGAAAATGGATACCTGGCACTAAAGTGCAAAGGTTGGAATACAAAGAGGAGGTGGAGCTGACCAAATATACGCCCACTCAAGAATATTGGTGCAATATGTGCTGTCGTAAATTGAAGAGCAAAGCAAGCTATGAATATCATTTCAAAACCACTTATCACTTGAAGCGAGCAGAACAGGAACAACAACTAGAGAAAGCGGTTATTGAAGAATTGCCGCCAATGTTGGATATAACAAAAAGTTTATTGTTTGAAACATCGGAACAAGAGGACAATCCAGAACTTAAAAGTTTGCCCCAAAAACCTACGAAAAGAAAACGACGACGTACATATTTAAGATGTAATCTGTGTAAACGCCACATGCATCGTCACCTCGTAGGGAAGCATTTAATTTCGCACTATCATTACCGGCATATGCAATTGCAACCCCGCGCCTccttaacatttattttggATAACATCCACTCAGTTGTGCGGCAGTCGCCTTTTCAATGCCGCCCCTGTCACTTCTATGCTAATACCGAGGAAAATTTCCTGCTACACTGGAACTCAGATTATCATCGGAGTAATTGCGAAGGTCCTGGACTGTACTGGTGCAGTTATTGCCGGTTTGAATGCGAAGACAACAATCAAATGCATCGCCACTTATTGGGACCCGAACATAGAGAGGTCCTTTCAGCTATTAATCGTTCCGTTCCGGTTTGCATTACCAAACTAACTAATATCGATTGCTCAATATGTGGTCAACAGTTTCGCTATAATTTTGAATTGCGTCAGCATATGTGCTCACTGCATCCGGGCATTCAGTTTTCGGGCACGGCGTCTGACTTTTATCAGTCACGTTTCAATTGTGATCTTTGCCCGGAAGTTTTAAACTCTAAAATTGCTTTACAACgccatgaaaaatataaacattccATCTTCAAgtatttttgttcaatttgcAATTCAGAATTCGGTACTGCTTGCCAGGCGCGAAGTCATCGGAAGACTGCTAAACATAAAGGAAAATCTGGCGAAATATTGATTAAAGAGAATGCCGCAAAAGGAATTGAAACTTCTtcacttaataaaattaatacaacCTACATGGATTTACCTTGTACTAGTAAAATGGCCAAGGCTAGAGAGCGCCTAGCCAAGTCTTTAGAGAAgATTCACCGCAAAGAAAAGCATTTGGTTCATACTTGTATGAGCTGTGGAGATAGTTACGCTACAGCTCAACTCCTGGGACGCCACTCTCGTTCTTGTACCCCAGCAAAATGTAATAAACAGTTCAATAAAGAAGCAGATAATGAGAAAGTTATAAGAAAGGGCAACTGGCGTTGTGAAGAATGTAATTTTGTGGCCAACCTCCAGTCCGAACTCTTATACCATCAACTGTACCACATATACGGAAATATGAACAAAGACCAACTTATCCCATGTCCTCTATGCGATAAATCGTTCCGTAAGCATTCCCTACGCTGTCATATACGTCAGCATacgaatgaaaaaatatttgaatgtcATTTGTGCCAAGCGAAATATGCACGACACCATAATCTCAAGGATCACATTAACAGATCGCATAGTAATGAGTTACAGTCGCAACCGCTGGTCAAGTCGCATATTACTCACCAGTGCCATATTTGTggcaaagtatataaaagcaaGCACTCATTGAAGTTACATACACAGTCGCAACATGAAGTGGCGCCGCTGCGGCAGTTTGTGTGTCCTCTGGAGAATTGCAATTATTCTGCTTTAAGTAAATCTCTACTAAAAACTCATTCACTTTCACATTCAACGAAAAGCTTTAAATGCCAACAACCGAATTGTCCTTATGTAGGCAAGAGTGCATTACATTTGAAACGACATTTTCGATCATTACATTCGTCGGACCTAGCGAACGCCACAAAAGCACTGTACCCTTGtacaaaatgtaattttacaGCCCAAACGCGTAATCACTTTCAACGTCACATGCGTTCACACACCGGGGAGAGGCCGTATCACTGTGCGTACTGTGACTACAACTGCAGTTCTTGGGAGAATTTACtTCCATCTAACCAAATATTCAAAACTAATtcatatcaaaaatataaaacacatttaaatatttgccacgcTAACCAATAA
Protein Sequence: MDDTHLCIRCSATIVGLENYIEHRKRNCCLVNVSPNDAKLPAIVVTSSSEQDVEGSPSVISYEGYHFVEPGTATNASPGNKSTKSLTDSYDLHYELGADVFFSSLQLQSVQPSTSGGKTPTSSQPGQLHRSKSVTQDSHMEDSWLVRNATPPVTQHDSEGLLNVVTAIEESKKSFETIFQPIVYEHESPDVTDEEDEEEMDMEMEDDDDDEDYDPVMEKSIIQQHSPPVVPVSHTGGKWKPENRPNLSVAHSQLPRLSPTSDDQEDLEGNEEQHPPPHYTKGKWIPGTKVQRLEYKEEVELTKYTPTQEYWCNMCCRKLKSKASYEYHFKTTYHLKRAEQEQQLEKAVIEELPPMLDITKSLLFETSEQEDNPELKSLPQKPTKRKRRRTYLRCNLCKRHMHRHLVGKHLISHYHYRHMQLQPRASLTFILDNIHSVVRQSPFQCRPCHFYANTEENFLLHWNSDYHRSNCEGPGLYWCSYCRFECEDNNQMHRHLLGPEHREVLSAINRSVPVCITKLTNIDCSICGQQFRYNFELRQHMCSLHPGIQFSGTASDFYQSRFNCDLCPEVLNSKIALQRHEKYKHSIFKYFCSICNSEFGTACQARSHRKTAKHKGKSGEILIKENAAKGIETSSLNKINTTYMDLPCTSKMAKARERLAKSLEKIHRKEKHLVHTCMSCGDSYATAQLLGRHSRSCTPAKCNKQFNKEADNEKVIRKGNWRCEECNFVANLQSELLYHQLYHIYGNMNKDQLIPCPLCDKSFRKHSLRCHIRQHTNEKIFECHLCQAKYARHHNLKDHINRSHSNELQSQPLVKSHITHQCHICGKVYKSKHSLKLHTQSQHEVAPLRQFVCPLENCNYSALSKSLLKTHSLSHSTKSFKCQQPNCPYVGKSALHLKRHFRSLHSSDLANATKALYPCTKCNFTAQTRNHFQRHMRSHTGERPYHCAYCDYNCSSWENLLPSNQIFKTNSYQKYKTHLNICHANQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01114634;
90% Identity: iTF_00384924;
80% Identity: -