Basic Information

Insect: Ornithomya fringillina
Gene Symbol: -
Assembly: GCA_963978525.1
Location: OZ021694.1:24565268-24574713[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00065 0.048 14.2 1.6 1 23 891 913 891 913 0.98

2 8 0.00026 0.019 15.5 1.3 1 23 945 967 945 967 0.97

3 8 0.044 3.3 8.5 4.1 1 20 975 994 975 999 0.89

4 8 0.041 3.1 8.5 0.0 3 23 1006 1027 1005 1027 0.96

5 8 0.00018 0.013 16.0 1.7 1 23 1033 1055 1033 1055 0.97

6 8 0.046 3.4 8.4 0.2 1 23 1062 1085 1062 1085 0.95

7 8 0.0023 0.17 12.5 2.4 2 20 1092 1110 1091 1113 0.91

8 8 1.4 1e+02 3.7 10.7 1 23 1119 1142 1119 1142 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00065	0.048	14.2	1.6	1	23	891	913	891	913	0.98
2	8	0.00026	0.019	15.5	1.3	1	23	945	967	945	967	0.97
3	8	0.044	3.3	8.5	4.1	1	20	975	994	975	999	0.89
4	8	0.041	3.1	8.5	0.0	3	23	1006	1027	1005	1027	0.96
5	8	0.00018	0.013	16.0	1.7	1	23	1033	1055	1033	1055	0.97
6	8	0.046	3.4	8.4	0.2	1	23	1062	1085	1062	1085	0.95
7	8	0.0023	0.17	12.5	2.4	2	20	1092	1110	1091	1113	0.91
8	8	1.4	1e+02	3.7	10.7	1	23	1119	1142	1119	1142	0.95

Sequence Information

Coding Sequence: ATGCAACCCACCATAATGTTTCTTCTAGCATGGGCAGTAGGCACTCCCATATCCTTGCAAATCATACGGAAGGGCGTCCTACCTATAGATCCGCTTGGTTTCAGTTTTGTCCACTGTGTCCCGTCAGTTGCAATTTCGATATCACCCGGTAGATTTTGGGATGTACTGGTTGATCAGTCCATAAATTTGTTGGACGGTTTGAGTAAAACATCACGTTGCGATGCTTTGCACTATTTATTGCAAAGCTTAAGACATAAATTTAGGGAAGATTGCGATCAAGTAGTTCGCAAAGTCTTCGCTGGGGTGATCCCATTGTCAGCCAGAAAAACAGCTGCTGTGTCATTATTAACAACATCCATAAAGGAAGAGATTAAAACTGAGGGGGACGGTGATCCTTCGACAGATTTGAATCAGAATTTTGAGAAAATCCTTTGCAAGGAGGAATTTGTGTGTCTGGATGAAGACGATGTttatgctgatgatgatggtgatacCGAAATGACGCATTCGacattaagaaaaaaacctCGTCTTagtgccaccaccaccaccgccactgTATCTCACACAGGTCCTTCAAATTGTGATCCACTGGACCTGATTCCCTCCTCTTTGATCGATGCCCGACGACTGGGCAGAGTGCACTTCGACGGCGCTGATAATAGTTTGGAACTACTGCCGCAGACTGAACTGCTTAAACGTAATGATGGCAAGGAGGAGTTATTGGATGGTAGTGATGACCTTTCTATTCATATCACCAATAAGAGTAGCAGTCACCTACTGCCATTCTACCCGCATGAATTGGTCGAGAAGATCCTCCCGCCACGTACTTCACGGTTGGGTGAAAGTTATGTTTTCTACCCAGACAGTGATTTTACGGTACGTTTCCATCACAGTTCTGCCGCTCTTAGCGCGCGCGTCTCAAAGGAACAATTCCGCATACAATTGAAAATTGCATTAAGTTCGCATCACAAACCATTtctgatgaaattttatgatgAATTTATTTTGACTGGTCGTCTGTTGGGCACAACTCCCTCCAAGCATGTGTTATTAGCCATACGTGCTGAACGGGAACAAGAATGGAATCAACAAATTATGCGAAAACAGCTGACCTTTAGGCAGGAGCAACAAAATTTCCTTAAACAGTACCAACAGAAGTATAAGCGACATTGTATGTTGGAGAGTGGTGGCACAAATGCCTTTGAATCGGATGAAGCTGATGAGGTGTTGGACGGGGAGGTGGGTGCAGATTCTGTGGAAGCAAAGGAAATCATCAAATTTGAAGAAATTATCGACGAGGGTGTGGAGCCCGGTGGGCGTATTATTGATGGGTTGGTCATGGAATCGGAAATAGAAGATGTATTAAGTGGTAGCGGTAACGGTACCGAAGGTACCTCTTCTATAGGCGCTAGGGGCAACAGCGACAGTTCCATTGACAATGGTTTAGACAACAAACCAATTGACCTCGGTGTGCCGGACAGTGATGTTTCCAGCTTAAATATTATACGTAACGAGGCAAGTGTTTCACCGGCCAATCACTTTGGAAGCGATTTATCGTATAGTCAACACCAGTTAGGAAGCGCCAATTTAGTGATAAATGGTCTTTCAACTGCGAATAATTTATGTGGCCAGGAAGAGCAGGTCGAGGACACCATCATGGCTGATCGGTTTTCCGGGTTTGATATTGAAGAGcaacagaaaaaacaacagcatCAGTTGCAATTTGTCCACTCTGAAGAAAACGCTGAACAGCATGATGATGCCGCGACCGCATTCAGAGCCCACAACAAGGTGGACATAATCGCCAATAGTGCGGTACCTGCTCTCCAATTGAATGTAAAGCCGGCAACGCAGCataatatcaacaatattatcaataataatagtgtACAACAGAGGCAACAACACTTTCAAGCTGAGCAGCACCAACACTACCAGCAGCGGTATATGATGCAACAACAGCCGCATCATCATCAACCATTGCAGCAGAACAATCATTTTAATGCCCGCATGCCGGCAGTACGTGCCCATCCATTGGCCATGATTGGGGGTATGATGGAAAGTGCCAATCAGGAGCATCAGCAATTGCAAATGGTGCATCAGCGTctacagcagcaacaacaacaaaatgctgACAATAGTGGTATGGTAGCGAACAGCATTGAGAACATATTGGATGgggcaacaacaaataaagcGAATCCCCCAGCTGTTCaagcaccagcaccagcacTCGGTAGTAAACAAATGCAATTTATCCactatcaacaacaacaacaacaacatctacttcagcaacaacaacaacagcaattgcCATCACATTCAAATATGATGGCTTCTCAATTGGGTATTGGAGGCGCCCTACCCGCCCACTCCACCAAAAGCTTGGCCGCGGTTATGCAACCGCAGGAAAACTCGAATGCACAAATGTCTGCAAAAGATGCAAATACGTCATTCGATCATGATGATAACGACATGTCCCAAGACGAAGAAGATGAAGATCATGAAACCAATGATACCAACGACGGCATGGAAGTTAAACCTCAATTAATTGACGGTGGCAGCAGTAGTAGTACGTCACTGCAAGCACCATCGAGTGCATCAAATCCGAGCGTAAGTGTAGGAGGTACAATACAAAGTAgttccaaaaaagaaaagcctAGTTATAGCTGTTTATTGTGTCCAAAATCCTATCGTAAACGTAAATCTCTATTGGATCACTATAAAATACATCCCGGTCACTGTCATGATTGTGGTCAACCGAATGGCACGACGCTGGAAGAAATCATTCATCATAATCGCACAGTGCATGCCAAGGAGTATCCGTTCGTGTGCGAGACATGCGGTGAGTCGTATTCACGTCGTCAACAATTTCATGCACATGTTGAATCTCACAATAAGAAAGAATTCAAAACTTATTCGTGCCATGAATGCGGCCAAAAGTTTTCCCACAAGAAGCTACATCAGCAACATTTGGATGATACGGGTCACAAGGTGGACGGTGCTATTTGTGAAGTGTGCGGTGATGAGTTTCCCTCCAAGAATGCCTTGTATCAGCATATTATCAGAGTTCACAAAAAGGATAATTTCTTCGAGTGTCACATATGCCAGAATCGATTCACGCTAAAGGCCAATCTCGAGCGACACGTTCAATTACATACCGAAATTAAGCGCACATACGTTTGTGATTTATGTGGGTCATCATATTTTACATATCCAGCGTTAAAGGATCACTACAGCAACGCTCATACGGATGCCTCTGAGTGCAAGTGTACGCTATGCGGAAAACGATTCGGCTCTGTTAAGTCATTGCAACGCCATCTGCCATCGCATTCGGAAGAACGACCGcactgttgctgttattgtgaTCAGACATTTAAATGGAAAACTCATTTAGTGCGTCATAAACAAACTGTTCACGGAAATCAGCCCTCACCGAAAAAGGTGAAACGCTTCACTAAAGAAGGGGACGAAATAGTATCCATGACGGATGTACCAGGACCACCACCAGCCAAGGTTGCTAAGAAATCAAATACCAACaaatcaaaacaacaacaaaatcaacaacagcagcccGTTTTACCACAACAATTGGGCTCTGTATCCACACCTCCACCTCTGTCCACCACACCAGGCACATCTTCCTCTTCTCAACAAGAACAATTCAATGCAGGTGTAACGAGTAATAATAGCTCACAGTCGTCAACAGCATCTACATCCCAGCACTCTTTAACCACAAACGAGCAGCAGCCGAATTCCATGTATAGTCAGAACTTTAGTGCTGAGAAATTGTTGGCGGGACAaccacagcagcagcaacaacaacaacaacagcaacaggtACATGTTGCGCATGGTGCGCCCCATGCACAGGCACAGACTCAGGgtcagcaacaacaaagacCGACGCCACCTCCcacacaacaacatcatcaccaAACGCAAgcgcagcaacaacaacaacagcatcaccGTCATACGCCCAATAGCAGTCACACACCAGACAATATAATGCCTCGTTTAAATACTTTTGCAGCGGGTTTGCCCGGCCAAGCAGCAGATACTACGTTTCACCATTTCGATCAAAGTGCCGCTGGCGTATCAACACCGATTTTGTCCACTAATCCGGCAGCGTATCAGCAGCATCAGATTATCAATCAGTATCACCAGCAGCAACAACTACACGCAACTGCtcaccagcagcagcagcagttacGAAGTCACACACCGCAAACGCCGCAAAGTCCGCACCATCAGCAAGCAGCTCCTCCACCGCAAATGGCCGCGCAGCATTTCACTTCACCACATCACCATTTACAGGCTGCACAGCATCATCAGCAAATGCATCACCATCAGCAAATgttgcagcaacaacaacatcaattaCAGCAGCAACATCAGCGTCACAATCAGCAGCGTTCaccacatcatcatcatcaaaccCAAGCACAACAgttgcagcagcagcaccagcaACAAGCGTCACATTCTCCACAGCATGTGGCAGCACGTTTACAGTCACCTCAACCGCAGTCACATACACCGCAACCGTCTGTAACTCATCCACAAAACCAACAGCAACCGCAATCACCCGCccttaatcatcatcatcaacaacaacaacagcagcagcaacagtatcaacagcaacaacagcagcagcaacaacactGTGTGACAGATCCTTGGGGTAATATTAACTTCCTTACTAGCCATCAACAACAGCAGGCTCAACAACaggcacaacaacaacaacaacagcagcagcatcaaaGTGGCAACAATAATGTTACGTCGGATGTAAAAGATAGTGCCAACAAATTCTATATTGTGGACTCTGCGGAGTTCTTGGGCCTACCCCCAATCAATGTGGGTGCAAATGTGAATGCGGCAACACCGGGGACAAGCGCCAATCAAGGGAATAGCGGCCATCAACaggcacaacaacaacaacagcaacaacagcggCAATCTCAAGTAGAAGGTATTGTTAGCAATGCGAGTAAGAATGCGCAGTCGCCAGAACAAGCATTGGGCAGTGGCGGGGATTTAATCAGTTTTCAGAGTATGTGGCCTCAGACGAATACCGCAAATCAGCTGGCATTCGCTGGTGGTAGCCAACAGTCAGCGCAACAACAGCAGCCTCAGCAACCGCAACAGCAATCCAATtcgcaacagcaacaacaacaacaacagcacgtACAACAAACACAGTCAAATGGTCAAACACCGACACCCTCGACAGCAACAGCTGCCGCAGACGCtcacaattataataatattggaAGTATTTTAACAAATCTGATCGACAACAATCAGACACCAATGGAATACAACTTTGAGTTAATGCAACAGAATGCGAATGTGACTGGGCCGGGGGGTGTGGTGCCCACAGCAATAGGTCCACCACCTGTGGTGTCCCTACAACCAGCACAACAACAAtctcaacagcagcagcagcaacaacaacaccatccTCTTGCTAATTCTCCGTATGGCCTTCAAGGAGGTCCTAGCGCCGTTGGCATGATTCGTCATTCAGCTGCAGCCGGTGCGTACGGTGCAACTGCTTCACTATATGACACTCACCATCCGGCACATCATGTGGCAACTGGCCTGGGTGAAATAAGCGAACAACAAAAGAACAGCTTCCAGCCATATCATCCACATGCAGCCCTACAACCACATGCACATGCTCATGCTCACACTCTAGCAGCGCACCCATTGGCTCCTACAGCCCATCATCCTTTATCAGCCGCTTCACATTTGTTACCACACGCAGGCCATCACGTTTATGAACGTGGCAGTTACCCAGTACTGAGTGGCGAAGAACCAAAGACCGTACTGCCACCCATTAGCGACTATATGCATCAtatgcagcagcagcagcatcatgTGCAACAGCCAGATTTGCTCTATTATCCCGGTGTGAAGAATGACTGA
Protein Sequence: MQPTIMFLLAWAVGTPISLQIIRKGVLPIDPLGFSFVHCVPSVAISISPGRFWDVLVDQSINLLDGLSKTSRCDALHYLLQSLRHKFREDCDQVVRKVFAGVIPLSARKTAAVSLLTTSIKEEIKTEGDGDPSTDLNQNFEKILCKEEFVCLDEDDVYADDDGDTEMTHSTLRKKPRLSATTTTATVSHTGPSNCDPLDLIPSSLIDARRLGRVHFDGADNSLELLPQTELLKRNDGKEELLDGSDDLSIHITNKSSSHLLPFYPHELVEKILPPRTSRLGESYVFYPDSDFTVRFHHSSAALSARVSKEQFRIQLKIALSSHHKPFLMKFYDEFILTGRLLGTTPSKHVLLAIRAEREQEWNQQIMRKQLTFRQEQQNFLKQYQQKYKRHCMLESGGTNAFESDEADEVLDGEVGADSVEAKEIIKFEEIIDEGVEPGGRIIDGLVMESEIEDVLSGSGNGTEGTSSIGARGNSDSSIDNGLDNKPIDLGVPDSDVSSLNIIRNEASVSPANHFGSDLSYSQHQLGSANLVINGLSTANNLCGQEEQVEDTIMADRFSGFDIEEQQKKQQHQLQFVHSEENAEQHDDAATAFRAHNKVDIIANSAVPALQLNVKPATQHNINNIINNNSVQQRQQHFQAEQHQHYQQRYMMQQQPHHHQPLQQNNHFNARMPAVRAHPLAMIGGMMESANQEHQQLQMVHQRLQQQQQQNADNSGMVANSIENILDGATTNKANPPAVQAPAPALGSKQMQFIHYQQQQQQHLLQQQQQQQLPSHSNMMASQLGIGGALPAHSTKSLAAVMQPQENSNAQMSAKDANTSFDHDDNDMSQDEEDEDHETNDTNDGMEVKPQLIDGGSSSSTSLQAPSSASNPSVSVGGTIQSSSKKEKPSYSCLLCPKSYRKRKSLLDHYKIHPGHCHDCGQPNGTTLEEIIHHNRTVHAKEYPFVCETCGESYSRRQQFHAHVESHNKKEFKTYSCHECGQKFSHKKLHQQHLDDTGHKVDGAICEVCGDEFPSKNALYQHIIRVHKKDNFFECHICQNRFTLKANLERHVQLHTEIKRTYVCDLCGSSYFTYPALKDHYSNAHTDASECKCTLCGKRFGSVKSLQRHLPSHSEERPHCCCYCDQTFKWKTHLVRHKQTVHGNQPSPKKVKRFTKEGDEIVSMTDVPGPPPAKVAKKSNTNKSKQQQNQQQQPVLPQQLGSVSTPPPLSTTPGTSSSSQQEQFNAGVTSNNSSQSSTASTSQHSLTTNEQQPNSMYSQNFSAEKLLAGQPQQQQQQQQQQQVHVAHGAPHAQAQTQGQQQQRPTPPPTQQHHHQTQAQQQQQQHHRHTPNSSHTPDNIMPRLNTFAAGLPGQAADTTFHHFDQSAAGVSTPILSTNPAAYQQHQIINQYHQQQQLHATAHQQQQQLRSHTPQTPQSPHHQQAAPPPQMAAQHFTSPHHHLQAAQHHQQMHHHQQMLQQQQHQLQQQHQRHNQQRSPHHHHQTQAQQLQQQHQQQASHSPQHVAARLQSPQPQSHTPQPSVTHPQNQQQPQSPALNHHHQQQQQQQQQYQQQQQQQQQHCVTDPWGNINFLTSHQQQQAQQQAQQQQQQQQHQSGNNNVTSDVKDSANKFYIVDSAEFLGLPPINVGANVNAATPGTSANQGNSGHQQAQQQQQQQQRQSQVEGIVSNASKNAQSPEQALGSGGDLISFQSMWPQTNTANQLAFAGGSQQSAQQQQPQQPQQQSNSQQQQQQQQHVQQTQSNGQTPTPSTATAAADAHNYNNIGSILTNLIDNNQTPMEYNFELMQQNANVTGPGGVVPTAIGPPPVVSLQPAQQQSQQQQQQQQHHPLANSPYGLQGGPSAVGMIRHSAAAGAYGATASLYDTHHPAHHVATGLGEISEQQKNSFQPYHPHAALQPHAHAHAHTLAAHPLAPTAHHPLSAASHLLPHAGHHVYERGSYPVLSGEEPKTVLPPISDYMHHMQQQQHHVQQPDLLYYPGVKND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01114628; iTF_00384904;
90% Identity: iTF_01114628; iTF_00384904;
80% Identity: -