Basic Information

Insect: Ornithomya fringillina
Gene Symbol: -
Assembly: GCA_963978525.1
Location: OZ021691.1:31209186-31217094[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.8 1.3e+02 3.4 0.3 1 23 1713 1736 1713 1736 0.93

2 12 0.19 14 6.5 2.5 1 23 1898 1920 1898 1920 0.94

3 12 0.00036 0.026 15.0 2.2 2 23 1923 1944 1923 1944 0.96

4 12 7.6e-05 0.0056 17.2 0.2 3 23 1952 1972 1950 1972 0.98

5 12 3.1e-06 0.00023 21.5 5.8 2 23 1979 2000 1978 2000 0.97

6 12 6.3 4.6e+02 1.7 0.1 5 23 2013 2031 2012 2031 0.96

7 12 0.014 1 10.0 0.1 2 23 2070 2090 2069 2090 0.96

8 12 2.1e-05 0.0016 18.9 0.6 1 19 2096 2114 2096 2118 0.95

9 12 1.3e-05 0.00096 19.6 1.5 1 23 2126 2148 2126 2148 0.99

10 12 0.00013 0.0097 16.4 6.5 1 23 2154 2176 2154 2177 0.96

11 12 0.0011 0.084 13.5 6.5 1 23 2182 2204 2182 2204 0.98

12 12 0.00059 0.044 14.4 6.2 1 23 2210 2232 2210 2233 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.8	1.3e+02	3.4	0.3	1	23	1713	1736	1713	1736	0.93
2	12	0.19	14	6.5	2.5	1	23	1898	1920	1898	1920	0.94
3	12	0.00036	0.026	15.0	2.2	2	23	1923	1944	1923	1944	0.96
4	12	7.6e-05	0.0056	17.2	0.2	3	23	1952	1972	1950	1972	0.98
5	12	3.1e-06	0.00023	21.5	5.8	2	23	1979	2000	1978	2000	0.97
6	12	6.3	4.6e+02	1.7	0.1	5	23	2013	2031	2012	2031	0.96
7	12	0.014	1	10.0	0.1	2	23	2070	2090	2069	2090	0.96
8	12	2.1e-05	0.0016	18.9	0.6	1	19	2096	2114	2096	2118	0.95
9	12	1.3e-05	0.00096	19.6	1.5	1	23	2126	2148	2126	2148	0.99
10	12	0.00013	0.0097	16.4	6.5	1	23	2154	2176	2154	2177	0.96
11	12	0.0011	0.084	13.5	6.5	1	23	2182	2204	2182	2204	0.98
12	12	0.00059	0.044	14.4	6.2	1	23	2210	2232	2210	2233	0.96

Sequence Information

Coding Sequence: ATGGTGAAAAATTTGCAGTGTCCCGTGTGCACTCTGTTTCTGCATGCTGGCATAAATTTGTGTGATCATCTGGAAACACATCCGAAGGAGCAGGTGATTAATGCTTTGGTCCAGTTGACAATATTGGGCAATGAACAACGCCCTTCATCGTTAATTGAGCCACCTGAAGAGGAGTGTAAAGAAAACGTTCTAGAGAAAGGAATTGTTGAAAGTAATGGCACAACGAGGCAGTCTGCTACACCCATTAAAGATCATGATTTGAGCAGTAATTCCAGCCATTCGGTTAGTATAGGTTCGCTCTCAAACCAAAGTTCCATCAACACACAAACATCTTTGAACAATGCCATAAGTTTTGGTGGTGAGAGCAATGCAACGGATGGCTGTTCGAATTTCTCAGCCAACTCTCAGAGAGTGGGTGCATTAAAGTCTGTCGTCAATGCAAACGCAAATGTTGAAAAGGTTGCCGGTTCAACTGCTAattcaacagcaacaacaacaacagtaacagcagcaacagcaacaacaacaatacaaaattatCAAACGAAAACATCGACTGCTCTGCCACATGTACCCACAGATTTCACCATATTTAGCAGTCAACGGTATCAGCACACTGTTCAGCCACCATCGATAAGCGTAAGCAATTCCTCAACACAATTGCTATCGCTGCTACATCAAAATCAATGTCAGGAGTATTTACGAAGCAATATGTCGGCAGCAGTTTTGCCGAACCAGCTGTCCAATGCGCTGATGGCGGACGCGATGCCAGGGCAAATAGCATTTCAGCACATTCACCATAAACAGCAGGCGCAAGTGCAAAATGAGTTGGCCATACTGACGCCACCATTACCACTACAATTAACGTTGCCCCCACCAATGCATCCCAGCACTCATCGTCAGGCGCAATTGTATCCCAGCCACCATCCACATCTGCAACAGAATTTactacagcagcagcagcaaaatATGTTCCCTGCCGAATTGCCACCGCCACCGCCTTTACAGTTGTTTACGTATCAGCCTGCGATTGCGCCACAACACCAGAAACCTCCACCGGCTTATGGCACCGCAATCAGTCAAATCAGATCTCAAAGTAAACACCAAAAACATCATGCTCCAGCGTTGTCGCATTTAAATCAAGCACACCAATCGTCATCATTAATCCCGGCAACTGCTGTGAAACAGCAACTGCCACTGCATCCGAATTCAAGCTCACCACACACTTTCCAGCAACGTTCTACCTTTCCATTGCACCAGAGTCTGCTACACACGCCCATCAATTCAATAatgcaccaacaacaaaatccaTCGAATAAGAAATCCTTGATCGCGACCAATATGGAGTTGAAAAATGTTCCAACACCTCCGCCTCCAGCCCCACCGGCACCGCAACCCTCTGCAGCTTTACATAATCGGGAATTGCTCCAGCCACAAAGTAAAAACTGTACTGATGTGCAAACACGAACACCGACCACAACGAATGCGGTTGCTCATGaaacacattttaaaaatagacgAAATTTATCGAATGTCTCggtaaaaacattaaacactCAATTGTCGAATAGTAGCATTCATGGGTCGGGCAGTTCTACTCCTGTGCACCACACCAATTCTCCCTACCCCGTGCTATTGGCCGCTGTTACATCAACACCTACCACGACGTCCGCATCATCCACCACTTCCGTTTTGCGTTTTGCCGAATCGCCCGTTGCTCACTACTTGGAACGGGAAAATGGCGATTTCATTGTACAAGAAACGCCCAAGCACATAATGGAATATGTGGAAAAGGAAGATGGAGAATTTTCGGTTATTGAGCGCATCTACCAGTCACCACCAAGTGTTCTGCACATACACGATgacaatgatgatgacgaaGAAGATGATAATGTTCCTCACAACAGCACCAATAGCAGCAGCAAAGGCGACTCCATTATGCCATTGAATGGGACTAAAGTTAGCAGCGATTTATCGACAGAGGGTCATAACTTTTCCGACATTGAAGATGATTTTATGAGCATCTCGGGTGAAAGCGATCAAGAAGAGTTTTTGGCAAATAGTCAGCAGTCACAAGCACAGCCACAGTCACAGGCACAGatgcagcagcaacaaaaaaacaaaaacgaaaatttacaaattgtggCAAAGCAAGTGGAACAAACAATGGCAGCAGTCGAAGAAGCACAGAGTCATTTATTAATGCCCTCAACGTCGAAATTCACTCCTGGCTCAAGTGCAACATCCAATGCGACTGCAACGATCCGTAAGAAATCTTCGAAAAACACCATCACAGTGTTGAGTGACGTACAACTGAACTTGAGTGAATACTTGGACTTGGTTGGCAACATAATAGCGTccagtaaaagaaaaacaccaacaaccaCAGCCCTAGCACCCATACCGTTAgtgaaaatagaaaaagaagaacCGCCAGACGATTATGAGACGCGTTTGCAACTACTGAACGAAGAGGTTGAGTCAAGCTCAGAAACTAAACCATCTCCgtcaccaacaccaacaccatcTCAAGCCAATAAACATGAGACTGATGATAATGTAACGGTTACAGCTAAAATGCGTACCAATATTGGAAAAACTGATGAGATGGAAAAGAAGCCTGATGTCAGTGACATATGTTCTCATACCGAAAAGGTTGGCACCTCACATTCCACCAACTATACTGGTCATGCTACCAGCGTTATACGTATGGCCAGTACTGCTAAtcctaatataaaaatacaccaaCACCAGCATCATCACTTTAATTATATCGATGCAACCAAAACGTCTACTGGTGGGATAAGACACGACGGTGAATGGAAGCATGACGCGAATAGTAATTCAGGTGAAGCGGAAGATTTATCTAAACCGCCGACTAAATCAAAGCAATATGGCAATGCTGCAGCCACTCAAGATTATGCGGGGAAGCATTACTCCTCCACACCGATAGCACGTAAGGGTCCAAAGAAATTGATTATTAAGCCCAAATCCTTAACCAAGACTGAAACAACAGTAATGTCAAATACGAAGGGTTGTAATGCGATGTTGTATGGTGATGATCAAAAGCCCTCAACTTCGGCCAAAGCCAAGGAAGAGTACAATAAACTAAAGCAACGAACGTCTCAACAAAACCAACCAAGCGGTGATGTTGGGGAGAAATGCGATAATAATCAGTCAGTTCAAAAATTCAGTTCAGCCGAGTCCCGTAGCAGGCCTGATAAGGAAATGCTGTGGAATGAGACAGAGAACGCTAAGGGTTTTAATTACATAACACTTTTGAACGGCAATCAATCACATGAAGCGGAAGATAAATGTGAGTTTGCGGAAGCATCAAATGTTCGCCATAAGGATTCTCAAGACATTTCTAAAAAACTATCAGAGAGTGATCGTGTGGTCCACGGTGATGTACAacgaaattgtgaaaaaagtCCCCAAAGTAAAGTGAAACTTGCGATATCCTCCGAACGTGGCGATAAGTTGCAAGAAAGGACACGCCCCTCCACAATGACTGAGAATATAATGAAGATCAAAAGTGAACCTTTGAGTCTGGTAAACTATGAAAATCTGTCAGGCGTACATGAGAATTTGGTGACACAACAAATGCAAGGTCCAGCTGCAGACGTGGTGATGGTTTGCAAAGAAGAGAAACCGTGCCTCACTGAGGCGTGTGTGACTGCCCAGATAATGACGCACATGAAAACGGAAAGCAACATAAATGAGGATGCAAGAGTGCTGTACAATTTTGCCAATTCGCGTAAAGTTTCTCTAACCGATGTGGCCGCTAATAATTTCGCCCTCTCCCCACCCAGCACTTCATCCAAGAAAGAACAATTGATTAGTAAAGCGAACAACAACACACCTACCTCTAGCTCCAGTTGTAATGCAGAATCTAGTGTGGCATCGTCTCACATCGATTTAGATGTGTACTCGTCACATTCGGCCAGCGAAGCAACCTTTGCACAGAGTTTCGAACATAGTGATGATGGCGGTGTCGGTGGTGGTCTTCAACAAAGTGCCACTCCCAATTTCATCGATTATCCTTTTAGTTTCCTATACAACAGCAATCACATCACATCACCCCAGCATGTTGATATAAAATGTTCCCAAACATTTTATCacaatgccaacaataatATCTCAGCGGCAAACATTGATGGTGTttccataaaaaaatcaacatcaaGTAGAAATGTGCTGACATCGTCTGAATGGTTTCATAATACAGATCCGAACAGTGCAACGACTTCAACTTCGAACACAACCCTACCCACCCCAACCGGTAATGTTGCTGTCGATTTCAATTCATCCTTGTCCGTGGATTGCAATGCCAGCCTGGACGGCAGTGATGTTAGTAAATATTTAGATTTGGATGCATGCAAACGAGAACAGAAATTCGACATGTCCAGCTATATGGAAAGTCAACAAGTGCCAATGGATCTGCCGCCCTCATCACCCAACTCTTGCTCGTTTACCGGTGGCAATGCTGATAATAGTTTGGTTGGTGCTTGTCCAACAGCAGCCACTCTGAATATACGTACCGATGAAAAAATGCCCGCCAAAGGGGAAATCTCCGAACAAGAGAGCAATTGCGATATTGACAATTCCTGGAGTCAACCGATGTACGGCGACATATCTGCACGCTTCTTTAAGACATCTTTCCCGGGAATGTTTACTCACGACAGTGGCTGGCATCATGATGATTGCTTTACAGCACAAGATTTAAGTGCTTCGACTACAACTCAAGCAGCGGCAGCAGCCAATGGTAGCAATCGAGCAAGAAGTTTCGATTTGCGACTTCCTATGGatacaacgacaacaacaagtgaacattttaatattagtAGCCAGCAAGTCTTTCCGTTAAACAGTCAAGATGTGCTGCCGTCTACATCgatgaaaacgaaaaaaaggCGTAAGCGTGGTTCTCAAGATGAGAAAATGACGGTGTTAGTGCCACAAGTTATAAATCAGCAACAACGTGATAGGGGATTAGATGTGAGTGATTTAGAACAAGTGCCAGCATCGGTGGCAATATCTGGTTTTTTGCCAGACCCCACCAATCTGACTGGTATACCATGTCCAACATTTGTACAAAGTTCATCTCCGCCAGAGCACAAGACACGCGAAAAAACATATGAGTGCGCTCGTTGTTTTGCCAAATATACAAAGCTAAAGGATCGTAACGCTCACATGATTGACGTGCACAAGTATGTGCGTCAAAATCGGAAATTAGTTTGTCCTCAATCGCTCATCACGTCAACGGTTACCAGTAATGAAGCGAATGCTGCTGAAATGGCGTCCAGCACTAGTGTCTGTCCCCTGATTGTGGGACAACATTTGCACAGTGATCAGCTGGAAGATTCAAAACATGGCATAATTAAAATGGAAACGGAACCATTAGAACATGTGGAAGCAACTTTGGACTTTGTAGCTAAAGTTCCGAACGAACTGGACATGGACGATAAAAGGAGCCTGATTATACCGATGGCCAATGCGCCAGATGCCAGAGTTATGCAACAGCCAGACCAAAAGGATATCAAATTCAATGGTTTGAATCGTCTTGGTTTCAATGCTCCTACGCCCAAGTTGACCACTCTATACCGCATGCTGGTCACCTACAacatgaataatttaaaaatgaaacaagaaGTGACAGAAATGGATGAAAAATTAATGGAATCGTTGATATTCTATTGTCATCTATGCCGGCAGAGCTTCTCATCGGTAAAACTGTACGATATACATTTAACGGAGCATCCAGCGGAATGTTTTTCATGTGGTAAGAAATTTCAAAGATGGAAAAATCTGTCGTTGCATCTCAAGCGTCATATGGGCTGGAAGGAGTTTGGTTGTAATGTGTGCGAAAAAAAGTTTGTTGTACGGAGCGCCCTAGTCGAACATATGCGAATGCATTCCGGTCATTCACCTCTAAAATGCAAAATATGCGgcAAACATTTCAAACGCTATTCGAATTTAACGCAACATCGCAAACGTCACAGCAAACAAGTGATTAGAAAGAAGGAGTACGTGTGCTATTGCGGCGAAGTTTTACCATCGAAGGCTCGCTTTTTGTGGCATAAGGAAACGCACGACTCGAAGCCCAAGTGCTGTCCACATTGCTGTGATCGTTTCATTCACATCAATTCGCTGAAGCGACACATCCGTTTGGCACATTCCGATAAATTCGACTATGTCGAGCCAATGGAGTGTCCAATTTGTAAGCAGGTGTTCGCAAAGGCCTCGATGAAATCTCATATGGCCACCCATTCAACGGACAGCCAGTACGATTGTAcgatttgcaataaatcattCTCCACCAAATGGAATTTGAAAATACATTCATGGGTGCATGCCAACCGTACATCGAAGCCGTTCAAGTGCGATCACTGTCCCAAAGCGTTTGTACgcgaaattgattttaaaaatcacatcaattctCACAAACAAATTAGACCGTACACGTGCGAAGTGTGCGGCTGCAAGTTTATacgtaaatataattatatgcgGCATCGGCGAGAGCATCATGGTGACAAGAAGTTCACATGTGATTTGTGCAAGAAATCGTTCCACCGTCACTACTACCTCATTGAGCACAGGCGCATACATACGGGCGAAAGGCCATTCCAGTGCACGATTTGCGGTAAGAGCTCCACCACTAAAACTAATCACAacaaacatatgaaaataCATCATTCGCGCGATCCCTTCACCGTAGAAGTGTGA
Protein Sequence: MVKNLQCPVCTLFLHAGINLCDHLETHPKEQVINALVQLTILGNEQRPSSLIEPPEEECKENVLEKGIVESNGTTRQSATPIKDHDLSSNSSHSVSIGSLSNQSSINTQTSLNNAISFGGESNATDGCSNFSANSQRVGALKSVVNANANVEKVAGSTANSTATTTTVTAATATTTIQNYQTKTSTALPHVPTDFTIFSSQRYQHTVQPPSISVSNSSTQLLSLLHQNQCQEYLRSNMSAAVLPNQLSNALMADAMPGQIAFQHIHHKQQAQVQNELAILTPPLPLQLTLPPPMHPSTHRQAQLYPSHHPHLQQNLLQQQQQNMFPAELPPPPPLQLFTYQPAIAPQHQKPPPAYGTAISQIRSQSKHQKHHAPALSHLNQAHQSSSLIPATAVKQQLPLHPNSSSPHTFQQRSTFPLHQSLLHTPINSIMHQQQNPSNKKSLIATNMELKNVPTPPPPAPPAPQPSAALHNRELLQPQSKNCTDVQTRTPTTTNAVAHETHFKNRRNLSNVSVKTLNTQLSNSSIHGSGSSTPVHHTNSPYPVLLAAVTSTPTTTSASSTTSVLRFAESPVAHYLERENGDFIVQETPKHIMEYVEKEDGEFSVIERIYQSPPSVLHIHDDNDDDEEDDNVPHNSTNSSSKGDSIMPLNGTKVSSDLSTEGHNFSDIEDDFMSISGESDQEEFLANSQQSQAQPQSQAQMQQQQKNKNENLQIVAKQVEQTMAAVEEAQSHLLMPSTSKFTPGSSATSNATATIRKKSSKNTITVLSDVQLNLSEYLDLVGNIIASSKRKTPTTTALAPIPLVKIEKEEPPDDYETRLQLLNEEVESSSETKPSPSPTPTPSQANKHETDDNVTVTAKMRTNIGKTDEMEKKPDVSDICSHTEKVGTSHSTNYTGHATSVIRMASTANPNIKIHQHQHHHFNYIDATKTSTGGIRHDGEWKHDANSNSGEAEDLSKPPTKSKQYGNAAATQDYAGKHYSSTPIARKGPKKLIIKPKSLTKTETTVMSNTKGCNAMLYGDDQKPSTSAKAKEEYNKLKQRTSQQNQPSGDVGEKCDNNQSVQKFSSAESRSRPDKEMLWNETENAKGFNYITLLNGNQSHEAEDKCEFAEASNVRHKDSQDISKKLSESDRVVHGDVQRNCEKSPQSKVKLAISSERGDKLQERTRPSTMTENIMKIKSEPLSLVNYENLSGVHENLVTQQMQGPAADVVMVCKEEKPCLTEACVTAQIMTHMKTESNINEDARVLYNFANSRKVSLTDVAANNFALSPPSTSSKKEQLISKANNNTPTSSSSCNAESSVASSHIDLDVYSSHSASEATFAQSFEHSDDGGVGGGLQQSATPNFIDYPFSFLYNSNHITSPQHVDIKCSQTFYHNANNNISAANIDGVSIKKSTSSRNVLTSSEWFHNTDPNSATTSTSNTTLPTPTGNVAVDFNSSLSVDCNASLDGSDVSKYLDLDACKREQKFDMSSYMESQQVPMDLPPSSPNSCSFTGGNADNSLVGACPTAATLNIRTDEKMPAKGEISEQESNCDIDNSWSQPMYGDISARFFKTSFPGMFTHDSGWHHDDCFTAQDLSASTTTQAAAAANGSNRARSFDLRLPMDTTTTTSEHFNISSQQVFPLNSQDVLPSTSMKTKKRRKRGSQDEKMTVLVPQVINQQQRDRGLDVSDLEQVPASVAISGFLPDPTNLTGIPCPTFVQSSSPPEHKTREKTYECARCFAKYTKLKDRNAHMIDVHKYVRQNRKLVCPQSLITSTVTSNEANAAEMASSTSVCPLIVGQHLHSDQLEDSKHGIIKMETEPLEHVEATLDFVAKVPNELDMDDKRSLIIPMANAPDARVMQQPDQKDIKFNGLNRLGFNAPTPKLTTLYRMLVTYNMNNLKMKQEVTEMDEKLMESLIFYCHLCRQSFSSVKLYDIHLTEHPAECFSCGKKFQRWKNLSLHLKRHMGWKEFGCNVCEKKFVVRSALVEHMRMHSGHSPLKCKICGKHFKRYSNLTQHRKRHSKQVIRKKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFIHINSLKRHIRLAHSDKFDYVEPMECPICKQVFAKASMKSHMATHSTDSQYDCTICNKSFSTKWNLKIHSWVHANRTSKPFKCDHCPKAFVREIDFKNHINSHKQIRPYTCEVCGCKFIRKYNYMRHRREHHGDKKFTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHMKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00384783; iTF_01114496;
90% Identity: iTF_01114496;
80% Identity: -