Basic Information

Insect: Crataerina pallida
Gene Symbol: -
Assembly: GCA_949710015.1
Location: OX453290.1:4676095-4683974[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.8 1.2e+02 3.4 0.3 1 23 1711 1734 1711 1734 0.93

2 12 0.19 13 6.5 2.5 1 23 1896 1918 1896 1918 0.94

3 12 0.00036 0.024 15.0 2.2 2 23 1921 1942 1921 1942 0.96

4 12 7.6e-05 0.0051 17.2 0.2 3 23 1950 1970 1948 1970 0.98

5 12 3.1e-06 0.00021 21.5 5.8 2 23 1977 1998 1976 1998 0.97

6 12 6.3 4.3e+02 1.7 0.1 5 23 2011 2029 2010 2029 0.96

7 12 0.014 0.94 10.0 0.1 2 23 2068 2088 2067 2088 0.96

8 12 2.1e-05 0.0015 18.9 0.6 1 19 2094 2112 2094 2116 0.95

9 12 1.3e-05 0.00088 19.6 1.5 1 23 2124 2146 2124 2146 0.99

10 12 0.00013 0.0089 16.4 6.5 1 23 2152 2174 2152 2175 0.96

11 12 0.0011 0.077 13.5 6.5 1 23 2180 2202 2180 2202 0.98

12 12 0.00059 0.04 14.4 6.2 1 23 2208 2230 2208 2231 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.8	1.2e+02	3.4	0.3	1	23	1711	1734	1711	1734	0.93
2	12	0.19	13	6.5	2.5	1	23	1896	1918	1896	1918	0.94
3	12	0.00036	0.024	15.0	2.2	2	23	1921	1942	1921	1942	0.96
4	12	7.6e-05	0.0051	17.2	0.2	3	23	1950	1970	1948	1970	0.98
5	12	3.1e-06	0.00021	21.5	5.8	2	23	1977	1998	1976	1998	0.97
6	12	6.3	4.3e+02	1.7	0.1	5	23	2011	2029	2010	2029	0.96
7	12	0.014	0.94	10.0	0.1	2	23	2068	2088	2067	2088	0.96
8	12	2.1e-05	0.0015	18.9	0.6	1	19	2094	2112	2094	2116	0.95
9	12	1.3e-05	0.00088	19.6	1.5	1	23	2124	2146	2124	2146	0.99
10	12	0.00013	0.0089	16.4	6.5	1	23	2152	2174	2152	2175	0.96
11	12	0.0011	0.077	13.5	6.5	1	23	2180	2202	2180	2202	0.98
12	12	0.00059	0.04	14.4	6.2	1	23	2208	2230	2208	2231	0.96

Sequence Information

Coding Sequence: ATGGTGAAAAATTTGCAGTGTCCCGTGTGCACTCTGTTTCTGCATGCTGGCATAAATTTGTGTGATCATCTGGAAACACATCCGAAGGAACAGGTGATTAATGCTTTGGTCCAGTTGACAATATTGGGCAATGATCAGCGCCCTTCATCGTTAATTGAGCCACCTGAAGAGGAGTGTAGAGAAAACGTTCTAGAGAAAGGAATTGTTGAAAGTAATGGCACAACGAGGCAGTCTGCGACACCCATTAAAGATCATGATTTGAGCAGTAATTCCAGCCATTCGGTTAGTATAGGTTCGCTCTCAAACCAAAGTTCCATCAACACACAAACATCTTTGAACAATGCCATAAGTTTTGGTGGTGAGAGCAATGCAACGGATGGCTGTTCGAATTTCTCAGCCAACTCTCAGAGAGTGGGTGCATTGAAGTCTGTCGTCAATGCAAACGCAAATGTTGAAAAGGTTGCCGGTTCAACTGCTAattcaacagcaacaacaacaacagtaacatcagcagcagcaacaacaacaacaatacaaaactATCAAACGAAAACATCGACTGCTCTGCCATATGTACCCACAGATTTTACCATATTTAGCAGTCAACGGTATCAGCACACTGTTCAGCCACCATCGATAAGCGTAAGCAATTCCTCAACACAATTGCTATCGCTGCTACATCAAAATCAATGTCAGGAGTATTTACGAAGCAATATGTCGGCAGCAGCTTTGCCGAACCAGCAGTCCAATGCGCTGATGGCGGACGCGATGCCAGGGCAAATTGCATTTCAGCACATTCACCACAAACAGCAGGCGCAAGTGCAAAATGAGTTGGCCATACTGACGCCACCATTACCACTACAATTAACGTTGCCCCCACCAATGCATCCCAGCACTCATCGTCAGGCGCAATTGTATCCCAGCCACCATCCACATCTGCAACAGAATTTACTACAGcaccagcagcagcaaaaTATGTTCCCTGCCGAATTGCCACCGCCACCGCCTTTACAGTTGTTTACGTATCAGCCTTCGATTGCGCCACAACACCAGAAACCTCCACCGGCATATGGCACCGCAATCAGTCAAATTAGATCTCAAAGTAAACACCAAAAACATCATGCTTCAGCGTTGTCGCATTTAAATCAAGCACACCAATCGTCTTCGTTAATCCAGGCAACTGCTGTGAAACAGCAAGTGCCACTGCATCCGAATTCAAGCTCACCACACACTTTCCAGCAACGTTCTACCTTTCCTTTGCACCAGAGTCTGCTACACACGCCCATCAATTCAATAatgcaccaacaacaaaatccaTCGAATAAGAAATCCTTGGTCGCGACCAATATGGAGTTGAAAAATGTTCCAACACCTCCGCCCCCAGCCCCACCGGCACCGCAACCCTCTGCAGCTTTACATAATCGGGAGTTGCTCCAGCCACAAAGTAAAAACTGTACTGATGTGCAAACACGAACACCGAACACAACGAATGCGGTTGCTCATGaaacacattttaaaaatagacGAAATTTATCGAATGTCTCGGTGAAAACGTTAAACACTCAATTGTCGAATAGTAGCATTCATGGGTCGGGCAGTTCTACTCCTGTGCGCCACACCAATTCACCCTACCCAGTGCTATTGGCCGCTGTTACATCAACACCTACCACGACGTCCGCATCATCCACCACTTCCGTTTTGCGTTTTGCCGAATCGCCCGTTGCTCACTACTTGGAACGGGAAAATGGCGATTTCATTGTACAAGAAACGCCCAAGCACATAATGGAATATGTGGAAAAGGAAGATGGAGAATTTTCGGTTATTGAGCGCATCTACCAGTCACCACCAAGTGTTCTGCACATACACGATGGCAATGATGATGACGAAGAAGATGATAATGTTCCTCACAACAGCACCATTAGCAGCAGCAAAGGCGATTCCATTATACCATTGAATGGGACTAAAGTTAGCAGCGATTTATCGACAGAGGGTCACAACTTTTCCGACATTGAAGATGATTTTATGAGCATTTCGGGTGAAAGCGATCAAGAAGAGTTTTTGACAAATAGTCAGCAGTCACAAGCACAGCCACAGTCACAGGCACAGatacagcagcaacaaaaaaacaaaaacgaaaatttacaaattgtggCAAAGCAAGCGGAACAAACAATGGCAGCAGTCGAAGAAGCACAGAGTCATTTATTAATGCCCTCAACGTCGAAATTCACTCCTGGCTCAAGTGCAACATCCAATGCGACTGCAACGATCCGTAAGAAATCTTCGAAAAACACCATCACAGTGTTGAGTGACGTTCAACTGAACTTGAGTGAATACTTGGATTTGGTTGGCAACATAATAGCGTccagtaaaagaaaaacatcaaCAACCACAGCCCTAGCACCCATACCGTTAgtgaaaatagaaaaagaagaacCGCCAGACGATTATGAGACGCGTTTGCAACTACTGAACGAAGAGGTGGAGTCAAGTTCAGAAACTAAACCATTTCCGTCACCAACATCAACACCATCTCAAGCCAATAAACATGAGACTGATGATAATGTAACGGTTACAGCTAAAATGCGTACCAATGTTGGAAAAACCGATGAGATGGAAAAGAAGCCTGATGTCAGTGACATATGTTCTCATACCGAAAAGGCTGGCACCTCACATTCCACCAACTATACTGGTCATGCTACTAGCGTTATACGTATGGCCAGTACTGCTAAtcctaataaaaaaatacaccaACACCAGCATCATCactttaattatatcgatGCAACCAAAACGTCTACTGGTGGGATAAGACACGACGGTGAATGGAAGCATGACGCGAATAATAATTCGGGTGAAGCGGAAGATTTATCGAAACCGCCGACTAAATCAAAGCAATACGGTAATGCTGCAGCCACTCCAGATTATACAGGGAAGCATTACTCTTCCATACCGATAGCACGTAAGGGTCCGAAGAAATTGATTATTAAGCCCAAATCCTTAACCAAGACTGAAACAACAGTAATGTCAAATTCGAAGGGTTGTAATGCGGTGTTGTATGGTGATGATCAAAAGCCCTCAACTTCGGCCAAAGCCAAGGAAGAGTACAATAAACTAAAGCAACGTACGTCCCAACAAAACCAACCAAGCGATAATAATCAGTCAGTTCAAAAATTCAGTTCAGCCGAGTCCCGTAGCAGGCCTGATAAGGAAATGCTGTGGAATGAGACAGAGAAGGCTAAGGGTTTTAATTACATAACACTTTTGAACGGCAATCAATCACATGAAGCGGAAGATAAATATAAGTTTGCGGAAGCATCAAATGTTCGCCATAAGGATTCTCAagacatttataaaataccATCAGAGAGTGATCGTGTGATCCACGGTGATGTACAacgaaattgtgaaaaatatcCCCAAAGTAAAGTGAAACTTACGATATCCCCCGAACGTGACGATAAGTTGCAAGAAAGGAGACGCCCCTCCACAATGGTTGAGAATATAATGAAGATCAAAAGTGAACCTTTGAGTCTGGTAAACTATGACAATCTGCCAGGCGTGCATGAGAATGTGGTGACACAACAAATGCAAGGTCCAGCTGCAGACGTGGTGATGGTATGCAAAGAAGAGAAACCGTGCCTCACTGAGGCGTGTGTGACTGCCCAGATAATGACGCACATGAAAACGGAAAGCAACATAAATGAGGATGCTCGAGTGCTGTACAATTTTGCCAATTCCCGTAAAGTTTCTCTAACCGATGTGGCCGCTAATAATTTCGCCCCCTCCCCACCCAGCACTTCATCCAAGAAAGAACAATTGATTAGTAAAGCGAACAACAACACACCTACATCTAGCTCCAGTTGTAATACCGAATCTAGTGTGGCATCGTCCCACATCGATTTAGATGTGTACTCGTCGCATTCGGCCAGCGAAGCAACCTTTACACAGAGTTTCGAACATAGTGATGATGGCGGTATCGGTGGTGGTCTTCAACAAAGTGCCACTCCCAATTTCATCGATTATCCTTTTAGTTTCCTGTACAACAGCAATCACATCACATCACCCCAGCATGTTGATATAAAATGTTCCCAAACATTTTATCACAACGCCAACAATAATATCTCAGCGGCAAACAATGTGAACATTGATGGTGTTTccataaaaaaatcaacattaAGTAGAAATGTGCTGACATCGTCTGAATGGTTTCATAATACAGATCCGAACAGTGCAACGACTTCAACTTCAAACACAACTCTACCCACCCCAACCGGTAATGTTGCTGTCGATTTCAATTCATCCTTGTCCGTGGATTGCAATGCCAGCCTGGACGGCAGTGATGTTAGTAAATATTTAGATTTGGATGCATGCAAACGAGAACAGAAATTCGACATGTCCAGCTATATGGAAAGTCAACAAGTGCCCATGGATCTGCCGCCCTCATCACCCAACTCTTGCTCGTTTACCGGTGGCAATGCTGATAATAGTTTGGTTGGTGCTTGTTCAACAGCTGCCACTCTGAATATACGTACCGATGAAAAAATGCCCGCCAAAGGAGAAATCTCCGAACAAGAGAGCAATTGCGATATTGACAATTCCTGGAGTCAACCAATGTACGGCGACATATCTGCACGCTTCTTTAAGACATCTTTCCCGGGAATGTTTACTCACGACAGTGGCTGGCATCATGATGATTGCTTTACAGCACAAGATTTAAGTGCTTCGACTACAACTCAAGCAGCGGCAGCAGCCAATGGTAGCAATCGAGCAAGAAGTTTCGATTTGCGACTTCCTATGGatacaacgacaacaacaagtgaacattttaatattaGTACCCAGCAAGTCTTTCCATTAAACAGTCAAGATGTGCTGCCGTCTACATCgatgaaaacgaaaaaaaggCGTAAGCGTGGTTCTCAAGATGAGAAAATGACGGTGTTAGTGCCACAAGTCTTAAACCAGCAACAACGTGATAGGGGAGTAGATGTGAGTGATTTAGAACAAGTGCCAGCATCGGTGGCAATATCTAGTTTTTTGCCAGACCCCACCAATCTGGCTGGTATACCATGTCCAACATTTGTACAAAGTTCATCTCCGCCAGAGCACAAGACACGCGAAAAAACATATGAGTGCGCTCGTTGTTTTGCCAAATATACAAAGCTAAAGGATCGTAACGCTCACATGATTGACGTGCACAAGTATGTGCGTCAAAATCGGAAATTAGTTTGTCCACAATCGCTCATCACGTCAACGGTTACCAGTAATGAAGTGAATGCTGCTGAAATGGCGTCCAGCACTAGTGTCTGCCCCCTGATTGTGGGACAACATTTGCACAGTGATCAGCTGGAAGATTCAAAACATGGCATAATTAAAATGGAAACGGAACCATTAGAACATGTGGAAGCAACTTTGGACTTTGTAGCTAAAGTTCCGAAAGAACTGGACATGGACGATAAAAGGAGCCTGATTATACCGATGGCCAATGCGCCAGATGCCAGAGTTATGCAACAGCCAGACCAAAAGGATATCAAATTTAATGGTTTGAATCGTCTCGGTTTCAATGCTCCTACGCCTAAGTTGACCACTCTATACCGCATGCTGGTCACCTACAacatgaataatttaaaaatgaaacaagaaGTGACAGAAATGGATGAAAAATTAATGGAATCGTTGATATTCTATTGTCATCTATGCCGGCAGAGCTTCTCATCGGTAAAACTGTACGATATACATTTAACGGAGCACCCAGCGGAATGTTTTTCATGTGGTAAGAAATTTCAAAGATGGAAAAATCTGTCGTTGCATCTCAAGCGTCATATGGGCTGGAAGGAGTTTGGTTGTAATGTGTGCGAGAAAAAGTTTGTTGTACGGAGCGCCCTAGTCGAACATATGCGAATGCATTCCGGTCATTCACCtctaaaatgcaaaatatgcggCAAACATTTCAAACGCTATTCGAATTTAACGCAACATCGCAAACGTCACAGCAAACAAGTAATTAGAAAGAAGGAGTACGTGTGCTATTGCGGCGAAGTTTTACCATCGAAGGCTCGCTTTTTGTGGCATAAGGAAACGCACGACTCGAAACCCAAGTGCTGTCCACATTGCTGTGATCGTTTCATTCACATCAATTCGTTAAAGCGACACATCCGTTTGGCACATTCCGATAAATTCGACTATGTCGAGCCAATGGAGTGTCCCATTTGTAAGCAGGTGTTCGCAAAGGCCTCGATGAAATCTCATATGGCCACCCATTCAACGGACAGCCAGTACGATTGTACGATTTGCAATAAATCATTCTCCACCAAATGGAATTTGAAAATACATTCATGGGTGCATGCCAACCGTACATCGAAGCCGTTCAAGTGCGATCACTGTCCCAAAGCGTTTGTACGcgaaattgattttaaaaatcacatcAATTCTCACAAACAAATCAGACCGTACACGTGCGAAGTGTGCGGCTGCAAGTTTATacgtaaatataattatatgcgGCATCGGCGAGAGCATCATGGTGACAAGAAGTTCACGTGTGATTTGTGCAAGAAATCGTTCCACCGTCACTACTACCTCATTGAGCACAGGCGCATACATACGGGCGAAAGGCCATTCCAGTGCACGATTTGCGGTAAGAGCTCCACCACTAAAACTAATCACAACAAACATATGAAAATACATCATTCGCGCGATCCCTTCACCGTAGAAGTGTGA
Protein Sequence: MVKNLQCPVCTLFLHAGINLCDHLETHPKEQVINALVQLTILGNDQRPSSLIEPPEEECRENVLEKGIVESNGTTRQSATPIKDHDLSSNSSHSVSIGSLSNQSSINTQTSLNNAISFGGESNATDGCSNFSANSQRVGALKSVVNANANVEKVAGSTANSTATTTTVTSAAATTTTIQNYQTKTSTALPYVPTDFTIFSSQRYQHTVQPPSISVSNSSTQLLSLLHQNQCQEYLRSNMSAAALPNQQSNALMADAMPGQIAFQHIHHKQQAQVQNELAILTPPLPLQLTLPPPMHPSTHRQAQLYPSHHPHLQQNLLQHQQQQNMFPAELPPPPPLQLFTYQPSIAPQHQKPPPAYGTAISQIRSQSKHQKHHASALSHLNQAHQSSSLIQATAVKQQVPLHPNSSSPHTFQQRSTFPLHQSLLHTPINSIMHQQQNPSNKKSLVATNMELKNVPTPPPPAPPAPQPSAALHNRELLQPQSKNCTDVQTRTPNTTNAVAHETHFKNRRNLSNVSVKTLNTQLSNSSIHGSGSSTPVRHTNSPYPVLLAAVTSTPTTTSASSTTSVLRFAESPVAHYLERENGDFIVQETPKHIMEYVEKEDGEFSVIERIYQSPPSVLHIHDGNDDDEEDDNVPHNSTISSSKGDSIIPLNGTKVSSDLSTEGHNFSDIEDDFMSISGESDQEEFLTNSQQSQAQPQSQAQIQQQQKNKNENLQIVAKQAEQTMAAVEEAQSHLLMPSTSKFTPGSSATSNATATIRKKSSKNTITVLSDVQLNLSEYLDLVGNIIASSKRKTSTTTALAPIPLVKIEKEEPPDDYETRLQLLNEEVESSSETKPFPSPTSTPSQANKHETDDNVTVTAKMRTNVGKTDEMEKKPDVSDICSHTEKAGTSHSTNYTGHATSVIRMASTANPNKKIHQHQHHHFNYIDATKTSTGGIRHDGEWKHDANNNSGEAEDLSKPPTKSKQYGNAAATPDYTGKHYSSIPIARKGPKKLIIKPKSLTKTETTVMSNSKGCNAVLYGDDQKPSTSAKAKEEYNKLKQRTSQQNQPSDNNQSVQKFSSAESRSRPDKEMLWNETEKAKGFNYITLLNGNQSHEAEDKYKFAEASNVRHKDSQDIYKIPSESDRVIHGDVQRNCEKYPQSKVKLTISPERDDKLQERRRPSTMVENIMKIKSEPLSLVNYDNLPGVHENVVTQQMQGPAADVVMVCKEEKPCLTEACVTAQIMTHMKTESNINEDARVLYNFANSRKVSLTDVAANNFAPSPPSTSSKKEQLISKANNNTPTSSSSCNTESSVASSHIDLDVYSSHSASEATFTQSFEHSDDGGIGGGLQQSATPNFIDYPFSFLYNSNHITSPQHVDIKCSQTFYHNANNNISAANNVNIDGVSIKKSTLSRNVLTSSEWFHNTDPNSATTSTSNTTLPTPTGNVAVDFNSSLSVDCNASLDGSDVSKYLDLDACKREQKFDMSSYMESQQVPMDLPPSSPNSCSFTGGNADNSLVGACSTAATLNIRTDEKMPAKGEISEQESNCDIDNSWSQPMYGDISARFFKTSFPGMFTHDSGWHHDDCFTAQDLSASTTTQAAAAANGSNRARSFDLRLPMDTTTTTSEHFNISTQQVFPLNSQDVLPSTSMKTKKRRKRGSQDEKMTVLVPQVLNQQQRDRGVDVSDLEQVPASVAISSFLPDPTNLAGIPCPTFVQSSSPPEHKTREKTYECARCFAKYTKLKDRNAHMIDVHKYVRQNRKLVCPQSLITSTVTSNEVNAAEMASSTSVCPLIVGQHLHSDQLEDSKHGIIKMETEPLEHVEATLDFVAKVPKELDMDDKRSLIIPMANAPDARVMQQPDQKDIKFNGLNRLGFNAPTPKLTTLYRMLVTYNMNNLKMKQEVTEMDEKLMESLIFYCHLCRQSFSSVKLYDIHLTEHPAECFSCGKKFQRWKNLSLHLKRHMGWKEFGCNVCEKKFVVRSALVEHMRMHSGHSPLKCKICGKHFKRYSNLTQHRKRHSKQVIRKKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFIHINSLKRHIRLAHSDKFDYVEPMECPICKQVFAKASMKSHMATHSTDSQYDCTICNKSFSTKWNLKIHSWVHANRTSKPFKCDHCPKAFVREIDFKNHINSHKQIRPYTCEVCGCKFIRKYNYMRHRREHHGDKKFTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHMKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01115224;
90% Identity: iTF_01114496;
80% Identity: -