Basic Information

Insect: Ornithomya fringillina
Gene Symbol: L
Assembly: GCA_963978525.1
Location: OZ021694.1:65525-73077[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.6e-06 0.00041 20.7 1.7 1 23 207 229 207 229 0.98

2 18 0.45 33 5.3 5.7 1 23 235 257 235 257 0.98

3 18 2.4e-07 1.8e-05 25.0 3.1 1 23 263 285 263 285 0.99

4 18 1.1e-05 0.00083 19.8 0.3 1 23 291 313 291 313 0.98

5 18 0.47 35 5.2 1.0 2 23 382 405 381 405 0.89

6 18 9.8e-05 0.0072 16.8 0.6 2 23 434 456 433 456 0.97

7 18 0.93 69 4.3 1.5 1 23 561 583 561 583 0.97

8 18 0.00099 0.073 13.6 2.6 2 23 591 612 590 612 0.96

9 18 0.0023 0.17 12.5 0.7 1 23 620 645 620 645 0.92

10 18 0.19 14 6.5 0.1 1 19 650 668 650 670 0.96

11 18 0.0015 0.11 13.1 2.9 1 23 746 768 746 769 0.96

12 18 6.6 4.9e+02 1.6 1.2 1 23 924 948 924 948 0.87

13 18 0.0052 0.38 11.4 4.7 2 23 957 979 956 979 0.96

14 18 0.12 9.1 7.1 0.1 1 23 985 1007 985 1007 0.92

15 18 0.27 20 6.0 0.4 2 23 1015 1036 1014 1036 0.96

16 18 0.16 12 6.7 0.7 2 23 1127 1148 1127 1148 0.96

17 18 0.017 1.3 9.7 0.2 1 23 1158 1180 1158 1180 0.95

18 18 0.0012 0.09 13.4 0.5 1 23 1187 1209 1187 1209 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.6e-06	0.00041	20.7	1.7	1	23	207	229	207	229	0.98
2	18	0.45	33	5.3	5.7	1	23	235	257	235	257	0.98
3	18	2.4e-07	1.8e-05	25.0	3.1	1	23	263	285	263	285	0.99
4	18	1.1e-05	0.00083	19.8	0.3	1	23	291	313	291	313	0.98
5	18	0.47	35	5.2	1.0	2	23	382	405	381	405	0.89
6	18	9.8e-05	0.0072	16.8	0.6	2	23	434	456	433	456	0.97
7	18	0.93	69	4.3	1.5	1	23	561	583	561	583	0.97
8	18	0.00099	0.073	13.6	2.6	2	23	591	612	590	612	0.96
9	18	0.0023	0.17	12.5	0.7	1	23	620	645	620	645	0.92
10	18	0.19	14	6.5	0.1	1	19	650	668	650	670	0.96
11	18	0.0015	0.11	13.1	2.9	1	23	746	768	746	769	0.96
12	18	6.6	4.9e+02	1.6	1.2	1	23	924	948	924	948	0.87
13	18	0.0052	0.38	11.4	4.7	2	23	957	979	956	979	0.96
14	18	0.12	9.1	7.1	0.1	1	23	985	1007	985	1007	0.92
15	18	0.27	20	6.0	0.4	2	23	1015	1036	1014	1036	0.96
16	18	0.16	12	6.7	0.7	2	23	1127	1148	1127	1148	0.96
17	18	0.017	1.3	9.7	0.2	1	23	1158	1180	1158	1180	0.95
18	18	0.0012	0.09	13.4	0.5	1	23	1187	1209	1187	1209	0.96

Sequence Information

Coding Sequence: ATggctataaaaatgttatatcgTGGACCTAGTTCGAGACTTGAAAATTTGATTGAGAAAATTCTGGTgacaaaaagttttattagcactgATATGTATTCAACACATACATCGTCTAGTTACTCTCCTTCAGTGTCGGATGGCACCTTAACGCCAAATTCATTGTCTCATCAACATAATCATCAGCATCCCACTGCGCCATCACCACTGACATCAATACACCCAACACatattaatgaaaacaatGCTTTAATACAGACACCATGTCTACGAACAcgaaaatttaaaagtttactTGAAGGTGGCACTGAATGTCAAGAGAGTGATAAGAAATCGCAAGGTGATGACATCAAGCAAGATAGTGGTGCTGCTAATGTTGGGAAGAACATAGAAGAACAAGAACGAATTTTACACCTTTTCCAACCACACCACCAATCAAAACGTCACGGTCGTTATCATCGGCACGGTGAACATTCCATTAAAATACCGTCAAAAATacgaaaagttgaaaattctAAATGTTGCGGTAATGAGTTTGATAAGTTGACGGGTGACAGCATTAAAACAACCACCACAACTGCAGCCACTGCTAATAGTGCTAATAGTGGTGATGGATCCTATCAGTGTCAATTCTGTGATAAGTCATTTCCCCGCCttggttatttaaaaaaacatgagCAGagTCATGCCGAACATTTGCCTTTTAAATGCGAGTACTGTGCTCGCCTCTTTAAACATAAACGGTCTAGAGATCGACACACGAAACTGCATACGGGTGATCGGCGTTACCGGTGTCCTCACTGTGAAGCGGCTTTTTCAAGGAGTGAccatttaaaaattcacatGAAAACCCACGACAACCAGAAACCGTTTCAGTGTACAATCTGCAATCGTGGATATAACACCGCAGCTGCACTCACTTCTCATATgcaaaatcacaaaaaacaaGCAGCGATACTGGCTACAGGAATCAATTCTGAAATTATGAATTACAGTCCGCGTTCAACTGGATCCAACTCTAGTAACGGCAGTTTACACAAACGTGGTTATAATTCGATTGCTGGtggaagtaataataatattgatagCTCTAGTCGATTGGTTTTTTCTCGTCGCGTGCGATCGTCTTCATCGAATTTTCTGAAGTGtactttttgtggcaaatcGGACTTTTTTAGTATGGAACAATTGAATtcgcatataaaaaatttgcatgAAAAGGGATTGGTTAGAAGTATAACCAGCTCTCAAACAATCTCAGAAACACTACTTCCAAAGGATACACACAGTTTTCAATTAACATGTGAGTACTGTACTATGAAATTCACGAATATATCAGCAATGCTTCAGCATATGCGCACAATTCATATGGATCGTCTTACTAGCCCAAATTCCTATTTTGAACACTTTAATCGGTTAGCGGCCTCGGGCACTTTTAGTCCCCGCTTACCAACTGTACAACCATTGAAAGCTCCTGATAATGTGGCTGATGGAGTTATTAAAGAAGAAATCAATAGCAATATTAACAACAGCCCCAAATCATTGAATGGAAGTGctagaaataaaacaaacgatGACGAACCAACAGATTTAAGTCATACAACTAGGCGATCGCAATCTCCTCCTAATTCCGCAGCACATCATAATACGCCTCCAGTCATTACTAATAAACCTCACATGTATTTTTGTAACCAATGCAATGCCGGATTACCAGACTTTAATAGTTTCCGAGATCACTTGCATTCCCATTTATCCCAGAATGTTCAAATGGTTTGTCATCACTGTGGCTTGGTATTGAATCAGCAAAGTGAATACGAACGCCACTTTAATTCTCATTTTCTTATAACGAATTCAGAATTTAATTGTCCGGACAACAATTGCCAAAGCACTTTTACAAAATCCGATgaattgcaaaaacatttactGGATCAACATATGATCACCTTATATAAGTGTGATTTGTGTAGCGATATTTTTGAAACAAAGGTTACTCTACAGGTTCACTTTGCATGTTCACACACCGAAGAAACGAAAATTTTGAGGTGTTCAGCTTGTATGGACATTTTTCTTACAGATAATGATTTTAATGTGCACGTAAAAATGCGTCACCCGCCTGATAATGCAATCAGTGCGTTAACTacaaagaacaacaataacctgCATTGTACATTTTGCCGTACAGTCTGCTCTTCAGATCTGGAAATGCAATTCCACTTAGCTGCTCACGCCCGACAATTTCGTTGTCCGTCATGTCCTGAGACATTTCACGTTGAATTTCTATTAGACCGACATATGCAAACTCATCATGCCACAATGGAATGTAGTATTGTGAAACATAAGACAGACGAAATATCGCCCAATGCCTTTGGCGATCATTCACTTCTTGAACCATCAAATAACACAATTGTACCCATTAATTCACTCTATGTGAATGCCTTATTGAGTAAAGCGCCTTTATTAAATACAacacaaaataacaacaacaccatctTAGATTACAACATAGCTTTTGCATCGCATCTAAATAAGAGTCTTTTTCAAAACCCAAATGCTGTTCAAAAATTCTACAACCCTTTACAAATTGAGACGAATGCCATAAAACATTCAGCGCTAATATATGGCCTAAGTCAGAAATACTTTGATACCAGCCGTACTATTATGGACATGTATACTCAAACTCATACagaaaaaaactcaaaaaatGAAGATTACTTCAAAAGTCCAAATTCGGAAATAACCGCACAAACAGAACTTGCACGTTCAAATGGTTTTAGTTGTGGAATGTGTGAACGCAATGACTTCAAAACCGAATCTGAGGTGCATTCACACCGCAAAATTGTTCACAACCTTAAGACCGGTGTCAGTTTACGTTGCGCTTACTGTTCAGGTAATTTTAAATCACGCAATGAACTCGAACACCATATGAAGACCTGTCACAATTCGTCCGGTAAACATAAATGTCTTATTTgtgatgaaatttttccatCACCGGCTATACTGGCCGAACATAAACTACAGCACTCTAAAGTAGGTCAGTCAGGAAAGTGTTCTCATTGCTTAAAGGCTTTACCAAATGTAGGTGCTTTTAAGACACATTTATCCGCACACAATACTGAAGGCCAAATGCCCGTTCAATGCATCTGTTGTCGGCAGACTTTGCATTCAGACTTCGAAGTGGGATTGCATGCAAAaTTTCATATCAAAAGCTCCCATTTGATTGAGAATGTTTGTGCTTTATGTTTGCAACCTATTACCGGGAACCATCCTCCGGATGCTAAAGTATGTGAACAGTGCTGTGTCAAACATAGTCTTCATACCAAATTTAGGAAGCAGGATATTTATGAAAAGTCTTCAACCCTACATCAATATATTGAAAACCGTTGTAATTTGTGTAATATGGTTTTACCTCATCTACAAAAGTTGCGAGAACACTTGATAGAACATACGTTCGCTGGTTGCGAAGAGCGCGGCTTTAATTGTTACATATGCTCAGCCGTATTTACAGCATCCACTGGTCTACTCAATCATATGTTTGAACACGGTTTGAATGCTCGACCCTATGAATGCAATATTTGTCcagaaaaattctattttcgAGCCGAACTGGATCATCATCTTATTGATCATGATTTGAAGGATAAGTCcaatatacaaaatgaaacgaCTTCTACGTCTGtggaaaataatataagaaatatttttgtcaaaCCAACTAAACTAACAAAGGAAAAAGTGAAACTCAATGAAGTTAAGCAGGAAATCATAGAAACAGATAGCAATTCTAATGCTCCtgatgatgaagaatatatagaaGTAGAAAAACTTAATGAAACTGGCCAACTTAGCCAACGTGCTTTAGATATCGAAAAACAAGAGAATATAGATTCTGATAGTTCTGTAGATCATAAATCGCAATAa
Protein Sequence: MAIKMLYRGPSSRLENLIEKILVTKSFISTDMYSTHTSSSYSPSVSDGTLTPNSLSHQHNHQHPTAPSPLTSIHPTHINENNALIQTPCLRTRKFKSLLEGGTECQESDKKSQGDDIKQDSGAANVGKNIEEQERILHLFQPHHQSKRHGRYHRHGEHSIKIPSKIRKVENSKCCGNEFDKLTGDSIKTTTTTAATANSANSGDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCEYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAILATGINSEIMNYSPRSTGSNSSNGSLHKRGYNSIAGGSNNNIDSSSRLVFSRRVRSSSSNFLKCTFCGKSDFFSMEQLNSHIKNLHEKGLVRSITSSQTISETLLPKDTHSFQLTCEYCTMKFTNISAMLQHMRTIHMDRLTSPNSYFEHFNRLAASGTFSPRLPTVQPLKAPDNVADGVIKEEINSNINNSPKSLNGSARNKTNDDEPTDLSHTTRRSQSPPNSAAHHNTPPVITNKPHMYFCNQCNAGLPDFNSFRDHLHSHLSQNVQMVCHHCGLVLNQQSEYERHFNSHFLITNSEFNCPDNNCQSTFTKSDELQKHLLDQHMITLYKCDLCSDIFETKVTLQVHFACSHTEETKILRCSACMDIFLTDNDFNVHVKMRHPPDNAISALTTKNNNNLHCTFCRTVCSSDLEMQFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHATMECSIVKHKTDEISPNAFGDHSLLEPSNNTIVPINSLYVNALLSKAPLLNTTQNNNNTILDYNIAFASHLNKSLFQNPNAVQKFYNPLQIETNAIKHSALIYGLSQKYFDTSRTIMDMYTQTHTEKNSKNEDYFKSPNSEITAQTELARSNGFSCGMCERNDFKTESEVHSHRKIVHNLKTGVSLRCAYCSGNFKSRNELEHHMKTCHNSSGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCLKALPNVGAFKTHLSAHNTEGQMPVQCICCRQTLHSDFEVGLHAKFHIKSSHLIENVCALCLQPITGNHPPDAKVCEQCCVKHSLHTKFRKQDIYEKSSTLHQYIENRCNLCNMVLPHLQKLREHLIEHTFAGCEERGFNCYICSAVFTASTGLLNHMFEHGLNARPYECNICPEKFYFRAELDHHLIDHDLKDKSNIQNETTSTSVENNIRNIFVKPTKLTKEKVKLNEVKQEIIETDSNSNAPDDEEYIEVEKLNETGQLSQRALDIEKQENIDSDSSVDHKSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01114438; iTF_00384743;
90% Identity: iTF_00384743;
80% Identity: -