Basic Information

Insect: Ornithomya chloropus
Gene Symbol: L
Assembly: GCA_963971445.1
Location: OZ020530.1:24441155-24447660[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6e-06 0.0005 20.8 1.7 1 23 176 198 176 198 0.98

2 18 0.48 40 5.3 5.7 1 23 204 226 204 226 0.98

3 18 2.6e-07 2.2e-05 25.0 3.1 1 23 232 254 232 254 0.99

4 18 1.2e-05 0.001 19.8 0.3 1 23 260 282 260 282 0.98

5 18 2.6 2.1e+02 3.0 0.8 2 23 351 374 350 374 0.79

6 18 0.00011 0.0087 16.8 0.6 2 23 403 425 402 425 0.97

7 18 1 83 4.3 1.5 1 23 530 552 530 552 0.97

8 18 0.0011 0.088 13.7 2.6 2 23 560 581 559 581 0.96

9 18 0.0011 0.09 13.7 0.7 1 23 589 614 589 614 0.93

10 18 0.14 11 7.0 0.2 1 19 619 637 619 639 0.96

11 18 0.0016 0.13 13.2 2.9 1 23 715 737 715 738 0.96

12 18 7.1 5.9e+02 1.7 1.2 1 23 893 917 893 917 0.87

13 18 0.0056 0.46 11.4 4.7 2 23 926 948 925 948 0.96

14 18 0.13 11 7.1 0.1 1 23 954 976 954 976 0.92

15 18 0.35 29 5.8 0.3 2 23 984 1005 983 1005 0.95

16 18 0.17 14 6.7 0.7 2 23 1096 1117 1096 1117 0.96

17 18 0.019 1.5 9.8 0.2 1 23 1127 1149 1127 1149 0.95

18 18 0.0013 0.11 13.4 0.5 1 23 1156 1178 1156 1178 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6e-06	0.0005	20.8	1.7	1	23	176	198	176	198	0.98
2	18	0.48	40	5.3	5.7	1	23	204	226	204	226	0.98
3	18	2.6e-07	2.2e-05	25.0	3.1	1	23	232	254	232	254	0.99
4	18	1.2e-05	0.001	19.8	0.3	1	23	260	282	260	282	0.98
5	18	2.6	2.1e+02	3.0	0.8	2	23	351	374	350	374	0.79
6	18	0.00011	0.0087	16.8	0.6	2	23	403	425	402	425	0.97
7	18	1	83	4.3	1.5	1	23	530	552	530	552	0.97
8	18	0.0011	0.088	13.7	2.6	2	23	560	581	559	581	0.96
9	18	0.0011	0.09	13.7	0.7	1	23	589	614	589	614	0.93
10	18	0.14	11	7.0	0.2	1	19	619	637	619	639	0.96
11	18	0.0016	0.13	13.2	2.9	1	23	715	737	715	738	0.96
12	18	7.1	5.9e+02	1.7	1.2	1	23	893	917	893	917	0.87
13	18	0.0056	0.46	11.4	4.7	2	23	926	948	925	948	0.96
14	18	0.13	11	7.1	0.1	1	23	954	976	954	976	0.92
15	18	0.35	29	5.8	0.3	2	23	984	1005	983	1005	0.95
16	18	0.17	14	6.7	0.7	2	23	1096	1117	1096	1117	0.96
17	18	0.019	1.5	9.8	0.2	1	23	1127	1149	1127	1149	0.95
18	18	0.0013	0.11	13.4	0.5	1	23	1156	1178	1156	1178	0.96

Sequence Information

Coding Sequence: ATGTATTCAACACATACATCGTCTAGTTACTCTCCTTCAGTGTCGGATGGCACCTTAACACCAAATTCTTTGTCTCATCAACATAATTATCAGCATCCCACTGCGCCATCACCATTGACATCAATACATCCAACACATATTAATGAAAACAATGTTTTAATACAGACACCATGTCTGCCAACACGAAAATTAAATGGTTCACTTGATGGTAGCACTGAATGTCAAGCGAGTGATAAGAAATCGCAAGGTGATGACATCAAGCAAGATAGTGGTGCTACTAATGTTGGGAAGAACATAGAAGAACAAGAACGAATTTTACACCTTTTCCAACCACACCACCAAGCAAAACGTCACGGTCGTTATCATCGGCACGGTGAACATTCCATTAAAATACCGTCaaaaatacgaaaagttgaaaattcTGAATGTTGCGGTAATGAGTTTGATAAGTTGACGGGTGATAGCATTAAAACAACCACCACAACTGCAGCCACTGCTAATAGTGCTAATAGTGGTGATGGATCCTATCAGTGTCAATTCTGTGATAAGTCATTTCCACGCCTtggttatttaaaaaaacatgaGCAGaGTCATGCCGAACATTTGCCTTTTAAATGCGAGTACTGTGCTCGCCTCTTTAAACATAAACGGTCTAGAGATCGACACACCAAACTGCATACGGGTGATCGGCGTTACCGGTGTCCTCACTGTGAAGCGGCTTTTTCAAGGAGTGACCATTTAAAAATTCACATGAAAACCCACGACAACCAGAAACCTTTTCAGTGTACAATATGCAATCGTGGATATAACACCGCTGCTGCACTCACTTCTCATATGCAAAATCACAAAAAACAAGCAGCGATAGTGGCTACAGGAATCAATTCTGAAATTATGAATTATAGTCCGCGTTCAACCGGATCCAACTCTAGTAGCGGCAGTTTACACAAACGTCGTTATAATTCGATTGCTGGTGgaagtaataataatgttgaTAGCTCTAGTCGATTGGTTTTTTCTCGTCGCGCGCGATCATCTTCATCGAATTTTCTCAAGTGTACTTTTTGCGGCAAATCGGACTTTTTTAGTATGGAACAAATGAATTcgcatataaaaaatttgcatGAAAAGGGATTGGTTAGTAGTATAACCAGCTCTCAAACAATCTCGGAAACACTACTTCCAAAGGATACCCACAGTTTTCAATTAACATGTGAGTACTGTACTATGAAATTCACGAATATATCAGCAATGCTTCAGCATATGCGCACAATTCATATGGATCGTCTTACTAGCCCAAATTCCTATTTTGAACACTTTAATCGGTTAGCGGCCTCGGGCACTTTTAGTCCTCGCTTACCAACTGTACAACCATTGAAAGCTCCTAGTAATGTGGATGATGGATTTATTAAAGAAGaaaccaataacaacattaacaacagcCCTAAATCATTGAATGGAAGTGctagaaataaaacaaacgaTGACGAACCAACAGATTTAAGTCATACAGCTAGACGATCACAATCTCCTCCTAATTCCGCAGCACATCATAATGCGCCTCCAGTCATTACTGAAAAACCTCACATGTATTTTTGTAACCAATGCAATGCCGGATTACCAGACTTTAATAGTTTTCGAGATCACTTGCATTCCCATTTATCCCAGAATATTCAAATGGTTTGTCATCACTGTGGCCTGGTATTAAATCAGCAAAGTGAATATGAACGCCACTTCAATTCTCATTTTCTTATATCGAATTCAGAATTTAGTTGTCCAGACAACAATTGCCAAAACACTTTTACAAAATCCGATGAATTGCAAAAACATTTACTGGATCAACATATGATTACCTTATATAAGTGTAATTTGTGTAGCGATATTTTTGAAACTAAGGTTACTCTACAGGTTCATTTTGCATGTTCACACACCGAAGAAACGAAAATTTTGAGGTGTTCCGCTTGTATGGACATTTTTCTTACAGATAATGATTTTAATGTGCACGTAAAAATGCGTCACCCGCCTGATAACCCGATCAGTGCGTTAACCAcaaagaacaacaataacctGCATTGTACGTTTTGCCGTACAGTCTGCTCTTCAGATCTGGAAATGCAATTCCACTTAGCTGCTCACGCCCGACAATTTCGTTGTCCGTCATGTCCTGAGACATTCCACGTTGAATTTCTATTGGACCGACATATGCAAACTCACCATGCCACAATGGAATGTAGTATTGTGAAACATAAGACAGACGAAATATCGGCCGATACCTTTGGCGATCATTCACTTATTGAACCATCAAATAACACAATTGCACCCATTAATTCACTCTATGTGAATGCTTTATTGAGTAAAGCGCCTTTATTAAATGCAAcccaaaataacaacaacaccatcTTAGATTACAACATAGCATTTGCATCGCACCTAAATAAGAGTCTTTTTCCAAACCCAAATGCTATTCAAAAATTCTACAACCCTTTACAAATTGAGACGAATGCCATAAAACATTCAGCGCTAATATATGGCCTAAGTCAGAAGTACTTTGATACCAGCCGTACTATTATGGACATGTATACTCAAACTCATACAgaaaaaaactcaaaaaaTGGAAATTACTTCAAAAGTCCTAATTCAGAAATAACCACACAAACAGAACTTACACGTTCAAATGGTTTTAGTTGTGGAATGTGTGAACGCAATGACTTTAAAACCGAATCTGAGGTGCATTCACACCGCAAAATTGTTCACAATCTTAAGACCGGTGTCAGTTTACGTTGCGCTTACTGTTCAGGTAATTTTAAATCACGCAATGAACTCGAACACCATATGAAGACCTGTCACAATTCTTCCGGTAAACATAAATGTCTTATTTGTGATGAAATTTTTCCATCACCGGCTATATTGGCCGAACATAAACTACAACACTCTAAAGTAGGTCAGTCAGGAAAGTGTTCTCATTGCCTAAAGGCTTTGCCAGATGTCGGTGCTTTTAAAACACATTTATCCGCACACAATACTGAAGACCAAATGCCCGTTCAATGCATCTGTTGTCGGCAGACTTTGCATTCGGACTTCGAAGTGGGATTGCATGCAAAATTTCATATCAAAAGCTCTCATTTGATTGAGAATGTTTGTGCTTTATGTTTGCAACCTATTCCCGGGAACCATCCTCCGGATGCTAAAGTATGTGAACAGTGCTGTATCAAGCATAGTcttcataccaaatttagGAAGCAGGATACTTATGAAAAGTCTTCAACCCTACAGCAATATATTGAAAACCGTTGTAATTTGTGTAATATGGTTTTACCTCATCTACAAAAGTTGCGGGAACACTTGATAGAACATACGTTCGCTGGTTGCGAAGAACGCGGCTTTAATTGTTACATATGCTCAGCCGTATTTACAGCATCCACTGGTCTACTCAATCATATGTTTGAACACGGTTTGAATTCTCGACCCTATGAATGCAATATTTGTCcagaaaaattctattttcGAGCCGAACTGGATCATCATCTTATTGATCATGATTTGAAGGATAAGTCCAATATCCAAAATGAAACGACATCTACGTCTGTGGAAAATAacataagaaatatttttgtcaaACCGACCAAACTAACAAAGGATAAAGTGAAACTCAATGAAGTTAAGCAGGAAATCATAGAAACAGATAGCAATTCTAACGCTCCtgatgatgaagaatatatagaAGTAGAAAAACTTCATGAAACTGGCCAACTTAGCCAACGTGCTTTAGATATCGAAAAACAAGAGAATATAGATTCTGATAGTTCTGTAGATCATAAATCGCAATAa
Protein Sequence: MYSTHTSSSYSPSVSDGTLTPNSLSHQHNYQHPTAPSPLTSIHPTHINENNVLIQTPCLPTRKLNGSLDGSTECQASDKKSQGDDIKQDSGATNVGKNIEEQERILHLFQPHHQAKRHGRYHRHGEHSIKIPSKIRKVENSECCGNEFDKLTGDSIKTTTTTAATANSANSGDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCEYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAIVATGINSEIMNYSPRSTGSNSSSGSLHKRRYNSIAGGSNNNVDSSSRLVFSRRARSSSSNFLKCTFCGKSDFFSMEQMNSHIKNLHEKGLVSSITSSQTISETLLPKDTHSFQLTCEYCTMKFTNISAMLQHMRTIHMDRLTSPNSYFEHFNRLAASGTFSPRLPTVQPLKAPSNVDDGFIKEETNNNINNSPKSLNGSARNKTNDDEPTDLSHTARRSQSPPNSAAHHNAPPVITEKPHMYFCNQCNAGLPDFNSFRDHLHSHLSQNIQMVCHHCGLVLNQQSEYERHFNSHFLISNSEFSCPDNNCQNTFTKSDELQKHLLDQHMITLYKCNLCSDIFETKVTLQVHFACSHTEETKILRCSACMDIFLTDNDFNVHVKMRHPPDNPISALTTKNNNNLHCTFCRTVCSSDLEMQFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHATMECSIVKHKTDEISADTFGDHSLIEPSNNTIAPINSLYVNALLSKAPLLNATQNNNNTILDYNIAFASHLNKSLFPNPNAIQKFYNPLQIETNAIKHSALIYGLSQKYFDTSRTIMDMYTQTHTEKNSKNGNYFKSPNSEITTQTELTRSNGFSCGMCERNDFKTESEVHSHRKIVHNLKTGVSLRCAYCSGNFKSRNELEHHMKTCHNSSGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCLKALPDVGAFKTHLSAHNTEDQMPVQCICCRQTLHSDFEVGLHAKFHIKSSHLIENVCALCLQPIPGNHPPDAKVCEQCCIKHSLHTKFRKQDTYEKSSTLQQYIENRCNLCNMVLPHLQKLREHLIEHTFAGCEERGFNCYICSAVFTASTGLLNHMFEHGLNSRPYECNICPEKFYFRAELDHHLIDHDLKDKSNIQNETTSTSVENNIRNIFVKPTKLTKDKVKLNEVKQEIIETDSNSNAPDDEEYIEVEKLHETGQLSQRALDIEKQENIDSDSSVDHKSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01115186;
90% Identity: iTF_00384743;
80% Identity: -