Basic Information

Insect: Ornithomya fringillina
Gene Symbol: Zbtb41
Assembly: GCA_963978525.1
Location: OZ021691.1:8514213-8516729[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 8e-05 0.0059 17.1 2.6 1 23 321 344 321 344 0.98

2 11 0.12 8.9 7.1 0.4 1 21 419 439 419 440 0.95

3 11 9.4e-07 6.9e-05 23.2 0.1 1 23 448 470 448 470 0.98

4 11 0.00078 0.058 14.0 1.2 1 23 474 497 474 497 0.97

5 11 2.3e-06 0.00017 21.9 1.2 2 23 504 525 503 525 0.98

6 11 8.8e-08 6.5e-06 26.4 1.4 1 23 531 553 531 553 0.95

7 11 0.0011 0.078 13.6 0.6 1 23 559 581 559 581 0.99

8 11 9.8e-07 7.2e-05 23.1 3.1 1 23 587 609 587 609 0.99

9 11 0.016 1.2 9.8 0.6 1 23 615 637 615 637 0.98

10 11 3.8e-05 0.0028 18.1 3.9 1 23 643 665 643 665 0.99

11 11 1.7e-06 0.00013 22.3 1.3 1 23 670 692 670 693 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	8e-05	0.0059	17.1	2.6	1	23	321	344	321	344	0.98
2	11	0.12	8.9	7.1	0.4	1	21	419	439	419	440	0.95
3	11	9.4e-07	6.9e-05	23.2	0.1	1	23	448	470	448	470	0.98
4	11	0.00078	0.058	14.0	1.2	1	23	474	497	474	497	0.97
5	11	2.3e-06	0.00017	21.9	1.2	2	23	504	525	503	525	0.98
6	11	8.8e-08	6.5e-06	26.4	1.4	1	23	531	553	531	553	0.95
7	11	0.0011	0.078	13.6	0.6	1	23	559	581	559	581	0.99
8	11	9.8e-07	7.2e-05	23.1	3.1	1	23	587	609	587	609	0.99
9	11	0.016	1.2	9.8	0.6	1	23	615	637	615	637	0.98
10	11	3.8e-05	0.0028	18.1	3.9	1	23	643	665	643	665	0.99
11	11	1.7e-06	0.00013	22.3	1.3	1	23	670	692	670	693	0.95

Sequence Information

Coding Sequence: atggACATAGAAAAAATTTGTAGGACATGTTTGACCTTAAGTGGTCCTCTATTGTCCATTTACgatagtggtggtggtggatcCGGTTGTTTGGCTGATATGCTAAGAGAATTTACTAAAACCAAGCCGCAGCCTAACGATATGTTGCCAGAGAAAGTGTGCTTGTCGTGTATCAGCGAGATTAACCATTGCTACTCATTTAAACTGAAATGTGAAAACTCGAATAAAACTTTGAGACAATTAATCCCCAATGCTTTTAATGAAGAGCCCATAGATATTCTCGTGAAGGTAATCGATATAGGTACCCAAACAGAAAGAACAAAATGTGTATCCactacaatacaaacaatggAAAATAAAGATGTAGTGGGCAGTGAGGAagaaacatataaatttaagaacagaattaatattcataaatatgaggacaaaaatgggaaaaatgcaGAGTACGCTCCTTCAATATCACAAAGAGACGTTAAAAGGTTGCGCTTGGACACAGATGTAAATGATTTAGAGGAAAATAGTAATGGAGCAGAAGATTCTTATATTCTCGTAGAAGCTGCCGAAACGGATATAAATGCCACAAATAATAATCGAAATGAAGAAGTGGACGCGATAAATGCTGAAGCATATAGCGGCACCAATACCACTTcatctgatcaagaatttgaatattttgaacaACATGAAACCCGTTCAGAGTCGGAAAGCAAAGAAACGATtgattatgtttataaaagttCTGTCGATGACGATGGTGTAGACATAGACGATGAAACCGAATTagaaataattacaaatgaCGACCATCTTAATAAAGTTGACGATGATGAGGAAGAAATGGAAGTTTTAGATCAACCAGAATTAatcacaaaacacaaaatattacaaaataccAACGATAGTAGCGCACTGATGAAGTTTCTTAAATGTAAAACAGAAAGCCGAAAAAAGGAATACAAATGTCCACGTTGCTTCATGACATTCGTTAGCTTGAAATATCTTCGAAGGCATTTGAGTACGAGGCATGATATTGAACCGGCTTCAGCACACCTCGTTGTCCAAAAAGAGGTTAAACAAGTTGCAGCAAAGAGGGTAACCCGAGCCTCTAAGGCGCTTACGGAGACAATGGCAAATCCACAACGTCCAAAATTGACAGAAGAGAGTGTACCTATACCACGCTTACAACCACGCGAACGCATCTCTTCGCCTGCCGTTGCAGCCGATGATCTGAATACATCTAATTTGAAATACTTCTGCGAATATTGCAAAGCGGGAtttgtgtggcgcaaaacctTAACATTACACATGaaacaaaacatttgcaaATCGGATAATTTTAAATGCAATATTTGTGGACGAATATTTATAACGAAGATGAACCTTGAAGCACATGAGGCTACGCATAGCAATCAGCATACATGCTTGGAATGCAAAAAGGCTTGTGCCACCATAGAGGACCTTAGTCAGCACATGATTACCGCACACAATCGCAATGCACGTAATCAGtgcaatgtatgtaaaaaagTGTTCACCATGAAAACGTCATTAATGGATCACATGCGTATTCATAGTGGAGAGAAGCCGTTTTTGTGCACCGTGTGTGGGAAGAGTTTTCGCCAGAATTCTAATTTGCGTCAGCATGTAATGCGTCATACAAATGAGaagaatttcaaatgcgatctCTGCGCTAATGCTTATGTGACAAAGGCTGaactattttcacataaacGCACACATACCGGAGATCATCCATTCAAGTGTGAAATGTGCAATGCCCGTTTCACGTCGTCCAGTTCACTGCAGAAGCATCGTCGCAAACATACAGGCGAGCGTCCCTATGCTTGTGAATTTTGTCCGATGCGTTTTACCGccttaaatatattgaaaaatcatCGGCGTACACATACGGGTGAAAAACCGTACCAGTGCGAGTTATGCGATAAGCGCTTCTCCCAGAAAGGCGATTGTCAAATGCATCAAAGGACGCACAGCGAGAAACACTACGCGTGTAATGCTTGTGGTACTAAATACTCAAAACCTGCCAACTTGCGACAACATATGCGCACCCATCACAGTGAAATACCAAAAAAGGACCAAGATAATGCCGAAAGAACTCCTAGCCAGAACCCTGATACCGAAACTAGAGtacaaattacaattatgGATGAAGATCAGAATGAGGACGAAGAAGAAATTATCATTACGCATTCGGAAGATTCGAACTCACACTCACACGTAAAAGTTGCAATGACACCGAATGACAATAAGAGCCACACTGAAGAAGACGTTATGAAAATGGCTTGTTTgttgatttga
Protein Sequence: MDIEKICRTCLTLSGPLLSIYDSGGGGSGCLADMLREFTKTKPQPNDMLPEKVCLSCISEINHCYSFKLKCENSNKTLRQLIPNAFNEEPIDILVKVIDIGTQTERTKCVSTTIQTMENKDVVGSEEETYKFKNRINIHKYEDKNGKNAEYAPSISQRDVKRLRLDTDVNDLEENSNGAEDSYILVEAAETDINATNNNRNEEVDAINAEAYSGTNTTSSDQEFEYFEQHETRSESESKETIDYVYKSSVDDDGVDIDDETELEIITNDDHLNKVDDDEEEMEVLDQPELITKHKILQNTNDSSALMKFLKCKTESRKKEYKCPRCFMTFVSLKYLRRHLSTRHDIEPASAHLVVQKEVKQVAAKRVTRASKALTETMANPQRPKLTEESVPIPRLQPRERISSPAVAADDLNTSNLKYFCEYCKAGFVWRKTLTLHMKQNICKSDNFKCNICGRIFITKMNLEAHEATHSNQHTCLECKKACATIEDLSQHMITAHNRNARNQCNVCKKVFTMKTSLMDHMRIHSGEKPFLCTVCGKSFRQNSNLRQHVMRHTNEKNFKCDLCANAYVTKAELFSHKRTHTGDHPFKCEMCNARFTSSSSLQKHRRKHTGERPYACEFCPMRFTALNILKNHRRTHTGEKPYQCELCDKRFSQKGDCQMHQRTHSEKHYACNACGTKYSKPANLRQHMRTHHSEIPKKDQDNAERTPSQNPDTETRVQITIMDEDQNEDEEEIIITHSEDSNSHSHVKVAMTPNDNKSHTEEDVMKMACLLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01114414; iTF_00384719;
90% Identity: iTF_00384719;
80% Identity: -