Basic Information

Insect: Ornithomya chloropus
Gene Symbol: Zbtb41
Assembly: GCA_963971445.1
Location: OZ020529.1:6171999-6174517[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 8.8e-05 0.0073 17.1 2.6 1 23 324 347 324 347 0.98

2 11 0.46 38 5.4 0.4 1 21 422 442 422 443 0.93

3 11 1.6e-06 0.00013 22.6 0.1 1 23 451 473 451 473 0.98

4 11 0.00087 0.072 14.0 1.2 1 23 477 500 477 500 0.97

5 11 2.6e-06 0.00022 21.9 1.2 2 23 507 528 506 528 0.98

6 11 9.7e-08 8.1e-06 26.4 1.4 1 23 534 556 534 556 0.95

7 11 7.9e-05 0.0065 17.2 2.0 1 23 562 584 562 584 0.99

8 11 1.1e-06 9.4e-05 23.0 3.1 1 23 590 612 590 612 0.99

9 11 0.018 1.5 9.8 0.6 1 23 618 640 618 640 0.98

10 11 8.4e-05 0.0069 17.2 3.1 1 23 646 668 646 668 0.99

11 11 2.7e-06 0.00022 21.9 1.5 1 23 673 695 673 696 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	8.8e-05	0.0073	17.1	2.6	1	23	324	347	324	347	0.98
2	11	0.46	38	5.4	0.4	1	21	422	442	422	443	0.93
3	11	1.6e-06	0.00013	22.6	0.1	1	23	451	473	451	473	0.98
4	11	0.00087	0.072	14.0	1.2	1	23	477	500	477	500	0.97
5	11	2.6e-06	0.00022	21.9	1.2	2	23	507	528	506	528	0.98
6	11	9.7e-08	8.1e-06	26.4	1.4	1	23	534	556	534	556	0.95
7	11	7.9e-05	0.0065	17.2	2.0	1	23	562	584	562	584	0.99
8	11	1.1e-06	9.4e-05	23.0	3.1	1	23	590	612	590	612	0.99
9	11	0.018	1.5	9.8	0.6	1	23	618	640	618	640	0.98
10	11	8.4e-05	0.0069	17.2	3.1	1	23	646	668	646	668	0.99
11	11	2.7e-06	0.00022	21.9	1.5	1	23	673	695	673	696	0.95

Sequence Information

Coding Sequence: atggACATAGAAAAAATTTGTAGGACATGTTTGTCCTTAAGTGGTCCTCTATTGTCCATTTACgatagtggtggtggtggatcCGGTTGTTTGGCTGATATGCTAAGAGAATTTACTAAAACCAAGcCGCAACCTAATGATATGTTGCCAGAGAAAGTGTGCTTGACGTGCATCAGTGAGATAAACCACTGCTACTCATTTAAACTGAAATGTGAAAACTCGAATAAAACCTTGAGACAACTAATCCCCAATGCCTTTAATGGAGAACCCATAGATACTCTCGTGAAATTGATCGATATAGGTACCCAAACAGAAAGACCACAATATGTATCCACTACCATACAAACAATGGAAGATAAAGATGTAGTGCGCAGTGAGGAGGAAACATATAAATACGAGAACAGAATTAATATCCATAAATATGAGGACGCTAAGTGGAAAAATCCAGATTACGCTCCTTCAATATCGCAAAGTGCCGTTAAAAGGATGCGCTTGGACACAGATGTAGATGATTTAATCGAAAATAATGGAGCAGAAGAGTCTTATATTCTCGTGGACGCTGCCGAAGCGGATATAAatgctacaaataataatcaaaatgaAGAAGTGGACGCAACAAATGCTGAAGCATATAGCGGCAGCAATACGCCGTCATCTAATCAAcaatttgaatattttgaaCAACATCATGAAGCCCCTTCAGAGGCGGAAAGCAAAGAAACGATTGATTATCTTTATAAAAGTTCTGTTGATGACGATGATTCAGATATGAACGATGAAACCGAATTCCAAATCATCACAAATGACGAACAAAACCATCTTAATAAAGTTGATGATGATGGAGAAGAAGAAGTGGAACCAGATCAACCAGAATTAAtcacaaaacacaaaatatcacaaaatacCAACGATAGTGGCGCACTGACGAAGTATCTTGAATGTAAAAAACCAGAAAGCCGGAAAAAGGAATACAAATGTCCACGTTGCTTCATGACATTCGTTAGTTTGAAATATCTTCGACGGCATTTGAGTACGAGGCATGATATTGAACCGGCTTCAGCACAGCTCGTTGTCCAAAAAGAAGTGAAACAAGTTACAGCAAAGAGGGTGACCCGAGCCTCTACGGCACTTACAGAGACCACGGCAAatccacaattttcaaaattgacCGAAGAGAGTGTACCTATACCACGCTTACAACCACGCGAACGCATCTCTTCGCCTGCCGTTGCAGCCGATGATCTGAATAAATCTAATTTGAAATACTTTTGTGAATATTGCAAAGCTGGCTTTGTGTGGCGGAAAACCTTAACATTACACCTGaaacaaaacatttgtaaatcgGATAATTTCAAATGCTCTATTTGCGGACGAATATTTATAACGAAAATGAATCTGGAAGCACATGAGGCTACGCATAGCAATCAGCATACATGCTTGGAATGTAAAAAGGCTTGTGCCACCATAGAGGACCTTAGTCAGCACATGATTACCGCACATAATCGCAATGCACGTAATCAGTGCAATGTATGTAAAAAAgTGTTCACCATGAAAACCTCATTAATGGATCACATGCGCATTCATAGTGGAGAGAAGCCGTTTCTATGCACTGTGTGCGGGAAAAGCTTTCGTCAGAATTCTAATTTGCGTCAGCATGTAATGCGTCATACGAATGAGAAGAATTTCAAATGCGATCACTGCCCGAATGCTTATGTAACAAAGGCTGAACTATTTTCACATAAACGCACACATACCGGCGATCATCCATTCAAGTGTGACATGTGCAATGCCCGTTTCACGTCGTCCAGTTCACTGCAGAAGCATCGTCGCAAACATACAGGCGAGCGTCCCTATGCTTGTGAATTTTGTCCGATGCGTTTTACCGCcttaaatatattgaaaaatcaTCGGCGTACACATACGGGTGAAAAACCGTACCAGTGCGAATTATGCGATAAGCGCTTCTCCCAGAAAGGCGATTGTGTAATGCATCAAAGGACGCACAACGAGAAAAACTTCGCGTGTAATGCTTGTGGTACTAAATATTCAAAACCTGCCAACTTGCGACAACATATGCGCACACATCACAGTGCAATTCCAAAAAAGTACCAAAATAATGCCGAAAGAATTGCTACCCAGAACCCTGATGCCGAAACTAGAGTACAAATTACATTTATGGGTGAGGATCAGAATGAGGACGAAGAACAAATAATTATTACGCATTCGGAAGATTCGAACTCACACTCAGAAGAAAAAGTTACATTGACACCGAATGACAATAAGGGGCACACTGAAGAAGATATCATGAAAATGGCGTGCTCGTTGATTtga
Protein Sequence: MDIEKICRTCLSLSGPLLSIYDSGGGGSGCLADMLREFTKTKPQPNDMLPEKVCLTCISEINHCYSFKLKCENSNKTLRQLIPNAFNGEPIDTLVKLIDIGTQTERPQYVSTTIQTMEDKDVVRSEEETYKYENRINIHKYEDAKWKNPDYAPSISQSAVKRMRLDTDVDDLIENNGAEESYILVDAAEADINATNNNQNEEVDATNAEAYSGSNTPSSNQQFEYFEQHHEAPSEAESKETIDYLYKSSVDDDDSDMNDETEFQIITNDEQNHLNKVDDDGEEEVEPDQPELITKHKISQNTNDSGALTKYLECKKPESRKKEYKCPRCFMTFVSLKYLRRHLSTRHDIEPASAQLVVQKEVKQVTAKRVTRASTALTETTANPQFSKLTEESVPIPRLQPRERISSPAVAADDLNKSNLKYFCEYCKAGFVWRKTLTLHLKQNICKSDNFKCSICGRIFITKMNLEAHEATHSNQHTCLECKKACATIEDLSQHMITAHNRNARNQCNVCKKVFTMKTSLMDHMRIHSGEKPFLCTVCGKSFRQNSNLRQHVMRHTNEKNFKCDHCPNAYVTKAELFSHKRTHTGDHPFKCDMCNARFTSSSSLQKHRRKHTGERPYACEFCPMRFTALNILKNHRRTHTGEKPYQCELCDKRFSQKGDCVMHQRTHNEKNFACNACGTKYSKPANLRQHMRTHHSAIPKKYQNNAERIATQNPDAETRVQITFMGEDQNEDEEQIIITHSEDSNSHSEEKVTLTPNDNKGHTEEDIMKMACSLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01115160;
90% Identity: -
80% Identity: -