Ofri000207.1
Basic Information
- Insect
- Ornithomya fringillina
- Gene Symbol
- Ssb-c31a
- Assembly
- GCA_963978525.1
- Location
- OZ021690.1:1586114-1586484[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.27 5.2e+03 -2.9 0.5 28 34 27 34 24 36 0.58 2 2 4.1e-27 7.9e-23 79.8 0.7 1 51 42 92 42 93 0.96
Sequence Information
- Coding Sequence
- ATGCCAAAATCAAAAGCAAAATCCAGTTCTAGTGATAGCGATGAGGGTCCTGAGGATCGTAATCCGCCGCCCAAAAAGAAAGGCAAGGGAGaagagcttcccaataagtcTTCATCAAATCAATGGACTTTGGAGGGCTTACGACAAGTGCGTATAAATGAGTTTCGTGGCCGCCGATTTGTTGATATACGagaatattatgaaaaaaatggtGAGCAGTTGCCGGGCAAAAAGGGTATTTCTCTGTCCATTAATCAATGGAAAAAGCTTTTAGAAGTAGCTGAAGATATTACCAGTGCGGTGGAAAATTAA
- Protein Sequence
- MPKSKAKSSSSDSDEGPEDRNPPPKKKGKGEELPNKSSSNQWTLEGLRQVRINEFRGRRFVDIREYYEKNGEQLPGKKGISLSINQWKKLLEVAEDITSAVEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01114268;
- 90% Identity
- iTF_01114268;
- 80% Identity
- -