Ofri006985.1
Basic Information
- Insect
- Ornithomya fringillina
- Gene Symbol
- basR
- Assembly
- GCA_963978525.1
- Location
- OZ021691.1:13249862-13252251[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.6 1.8e+03 -0.8 0.2 22 46 182 208 178 208 0.77 2 5 7.7e-11 8.6e-08 32.3 0.0 1 45 214 259 214 260 0.95 3 5 2.8e-06 0.0031 17.7 0.0 3 42 270 313 269 317 0.94 4 5 2.7e-10 3e-07 30.5 0.0 3 44 325 367 323 369 0.92 5 5 2.1e-11 2.3e-08 34.1 0.0 2 44 376 419 376 421 0.96
Sequence Information
- Coding Sequence
- aTGTCTAAAGAAAAAGATTACACACATGCTATTGCTAATGTGGAGACCACAAATATCGAAGAGGCACTGgctcacaatataaaaatgcaaaaggAATTGCTAGCATACCGGCAACTAATACAAAACACATTAAAAACAGTGCAAGATGTATATAATACCAATGAGGAAttgataaagaataaaatGACACGAAAAAATAGAGGTTTTGGTATAAAAGGGGCCTATTTAAGAGGGGGTACTTTTTTCCTTAAAGGCAACATGTTCTTCAAGGATTTGAATTGTAGAAATTGTCCCAACAATAAAGATTACGAATATCGCCAAAACCGAGAAGGTGAACTTTTTCCCATGGATTTGGAATTGTGCGGTCGTCATGTGTGGTCCTTAAGAGATAAACAAGACGTTGTGGATGGTGTTAAAGAACAGGTTATTCAACATTTGACAGACACTCGAAATATTGAACcagaaaaaattcaacattttaAAAGATCCGGTAATGAAAAATTAGTCACATTGTTGTCTTATGTGACGGACGGCTTCCATATAGATTGGCAACAGATTTCCAAACACAACCTTCGACGCCGCCATTCCGCCACCAGTTGTGAAGCAATTTGGAATGTTTATCTTAACCCCGTTTTAAAGAGAACCGCTTGGACCATGGATGAAAATAAAGTGCTCTTGGAAGCAGTAAAGGcgtataattttcaaaactGGGCAGCCATAGCAGCTCAAGTTGGCAAGAGATCCGATTTTCAATGTTTTGTACAATATCAAAATAATGTTTGCTACATGTTGCCAGAGAGATGGACTAAATGGTCTAAAAAGGACGATAAGCGACTCGTTGATATTGTTGCTAAAAACACATTCAACAATGTGGTGAACTGGAACAACGTTATGGCACATTTTCCACATAAGCCTAAAACCACAATACAAGCCCGCTACTCCTACACCCTAAACCCTCATATAAGTCACGCTCCATTCACACCAGAAGAagatttattgttgttggcagCTGTTGAAGAATATGGAACGAAATTTTCTTGTCTACCCAAGACCCTATTTCCCCACAGAACCGTCATTCAATTGCGCTCCCgttacaaaaatacaatattgcaCCGTAACAAACTGCAACCGTGGACGGTGGAGGATGACAAGAAATTAATGGATTTTGTTTCCGAGCATGGAACTTCATCTTGGTTGCAATGCCAAAATGTTATGGGTAATCACACACGCACCAGCTGTCGTACACGCTACTTAACTATACAGaaattttttgagaaaaatcCAAATACCAGTCTTGAGGACATTCCAAGAAAAAAGAACTATACGCCATCACATAACATAACGCCAGAAAATTGGGTGGAAAAGTTGGCCGAATTGAAGAGCAATcctgaaatgaattttaagcAAAAACGCAAAACaaggaaaagaagaaaatgtacTCCGAACAAATTGCCAGTTGCCAAGAAGGCGAAGCATGGGTCAGGTGAAGCCGAAGAAACAGTTGACAGAACATACGAACAGACACCGTGTAGAAAGAAACCAATGTATGTGAAACGCTTGCGTAACGTGGGCTTACAATTTTATGATTTCTTCAAGTACGCCTTCAACTTTCAACTTGGCGACGATCCCATACATAAAGTACCTGAAAATGTTTTCCTCCTAAAGCAAGTTAGCCACCTATTGGACTTTCCTTTAACAACGGACTTCCGCTTTAACGGCAATCTGTCGCAAAACGCAATTCATGCGTTTAAAAATCTTTTGGAATTGGATACAAAAGATTGCGACGAAATCGAAACGTTTGATATTTTACCACCCAACTGGTCCAGTGCAATGGCGTTTCGAGCATTGTGTGTCTTGACATTACAACGGAATACTAATACAGTATCACCTAGTACGGAGCTATACTACAGCAATCATTcacaaattgttttgtttcgtAAAAGACTTCGAATCCTTTTATACTCTACCACGCTACTAAGTCGCCTGCATCCCTCCATGGTGAGGATTCCTGTTGAATCAAACAGTACAACAGAAGAACTGCACCATGAAAATATGAATCCAATCAGAAGTCGAAGTTTAGTCTTGTTAAGTAAAATTGCGGATAAAACCATTCCATTGATTAGACACAGGCGTGGTGGTAAAAATTCGCCTGCAGTCCAAGATGAAgttgatattaaaattgaagagAACACTTAG
- Protein Sequence
- MSKEKDYTHAIANVETTNIEEALAHNIKMQKELLAYRQLIQNTLKTVQDVYNTNEELIKNKMTRKNRGFGIKGAYLRGGTFFLKGNMFFKDLNCRNCPNNKDYEYRQNREGELFPMDLELCGRHVWSLRDKQDVVDGVKEQVIQHLTDTRNIEPEKIQHFKRSGNEKLVTLLSYVTDGFHIDWQQISKHNLRRRHSATSCEAIWNVYLNPVLKRTAWTMDENKVLLEAVKAYNFQNWAAIAAQVGKRSDFQCFVQYQNNVCYMLPERWTKWSKKDDKRLVDIVAKNTFNNVVNWNNVMAHFPHKPKTTIQARYSYTLNPHISHAPFTPEEDLLLLAAVEEYGTKFSCLPKTLFPHRTVIQLRSRYKNTILHRNKLQPWTVEDDKKLMDFVSEHGTSSWLQCQNVMGNHTRTSCRTRYLTIQKFFEKNPNTSLEDIPRKKNYTPSHNITPENWVEKLAELKSNPEMNFKQKRKTRKRRKCTPNKLPVAKKAKHGSGEAEETVDRTYEQTPCRKKPMYVKRLRNVGLQFYDFFKYAFNFQLGDDPIHKVPENVFLLKQVSHLLDFPLTTDFRFNGNLSQNAIHAFKNLLELDTKDCDEIETFDILPPNWSSAMAFRALCVLTLQRNTNTVSPSTELYYSNHSQIVLFRKRLRILLYSTTLLSRLHPSMVRIPVESNSTTEELHHENMNPIRSRSLVLLSKIADKTIPLIRHRRGGKNSPAVQDEVDIKIEENT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01114140;
- 90% Identity
- iTF_00384505;
- 80% Identity
- -