Ochl001042.1
Basic Information
- Insect
- Ornithomya chloropus
- Gene Symbol
- basR
- Assembly
- GCA_963971445.1
- Location
- OZ020529.1:11355236-11357622[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.8 2.3e+03 -0.8 0.2 22 46 181 207 177 207 0.77 2 5 9.3e-10 1.2e-06 28.9 0.0 1 45 213 258 213 259 0.95 3 5 1.9e-06 0.0023 18.4 0.0 3 42 269 312 268 316 0.94 4 5 1.5e-11 1.8e-08 34.7 0.0 3 44 324 366 322 368 0.92 5 5 9.1e-12 1.1e-08 35.4 0.0 2 44 375 418 375 420 0.96
Sequence Information
- Coding Sequence
- ATGTCTAAAGAAAAAGATTGCCCACATCCTGTTGCTAATGTGGACACCACAAATATCGAAGATGCACTGGCCCACAATATCAAAATGCAAAAGGAATTGTTAGCATTCCGTCAACTAATACAAAACACATTAAAAACAGTGCAAGATGTATATAATACCAATGAGGAACTGataaagaataaaatgaaacgaaaaagTAGAGGTTTTGGTATAAAAGGTGCCTATTTAAGAGGGGGTACTTTTTTCCTTAAAGGCAACATGTTCTTCAAGGATTTGAATTGTAGAAATTGTCCCAACAATAAAGACTACGAATATCGCCAAAACCGAGGTGAATTTTTTCCTATGGATTTGGAATTGTGCGGTCGTCATGTGTGGTCCTTAAGAGATAAACAAGATGTTGTAGATGGTGTTAAAGAACAGGTTATTCAACATTTGACGGACACTCGAAATATTGAACCACATAAAATTctacattttaaaaaatccgGTAATGAAAAATTAGTCACATTGTTGTCTTATGTGACGGACGGTTTCCATATAGATTGGCAACAGATTTCCAAACACAACCTTCGACGACGCCATTCCGCCACAAGTTGTGAAGCCATCTGGAATGTTTATCTTAACCCCGTTTTAAAGAGAACTACTTGGACTATGGAGGAAAATAAAATGCTCTTAGAAGCGGCAAAGGcgtataattttcaaaactGGGCAGCTATAGCAGCTCAAGTTGGCAAGAGATCCGAATTTCAATGTTTTGTACAATATCAAAATAATGTTTGCTATATGTTGCCAGAGAGATGGACTAAATGGTCTAAAAAGGATGATAAGCGACTCGTAGAAATTGTTGCGAAAAACACGTTCAACAATGTGGTGAACTGGAACAATGTTATGGCACATTTCCCATATAAGCCTAAAACCACAATACAAGCCCGCTACTCCTACACCCTAAACCCTCACATAAGTCACGCTCCATTCACACCAGAAGAAgacttattgttgttggcagCTGTTGAAGAATATGGAACGAAATTTTCTCGTCTACCCAAGACACTATTTCCCCACAGAACCGTCATTCAATTGCGCTCCCGttacaaaaatacaatactGCACCGTAACAAACTGCAACCGTGGACGGTGGAGGATGACAAGAAATTATTGGATTTTGTTTCCGAGCATGGAACCTCATCTTGGTTGCAATGCCAAGATGTTATGGGTAATCATACACGTACTAGCTGTCGCACACGCTACTTAACTATACAGaaattttttgagaaaaatcCAAATGCCAGTCTTGAGGATATTCCAAGAAAAAAGAATTATACGCCATCACATAACATAACGCCAGAAAATTGGGTGGAAAAGTTGGCCGAATTGAAGAGCAATCCTCAAATGAATTTGAagcaaaaacataaaacaaggaaaagaaaaaaaagtactCCGAACAATTTGCCAGTTGCCAAGAAGGTGAAGCGTTGTTCAGGTGAAGCCGAAGAAACAGAGTTTATAGCCAACAGAACTACAAAAACACATGAACAGAAATCGTGTAGAAAGAAACCAATCTATGTGAAACGATTGCGTAACGTGGGCTTGCAATTTTATGATTTCTTCAAGTACGCCTTCAACTTTCAACTTGGCGACGATCCTATACGTAAAATGCCTGAAAATGCTTTCCTCCTAAAACTAGTTAGCCATCTATTGGAGTTTCCTTTAAGAAAGGACTTTTGCTTTAACGGCAATCTGTCGCAAGAAGCGATTCATGCGTGTAAAAATCTTTTGGAATGGAAAACAAAAGATTGTAGCGAAATGGAAATGGAAACGTCTGATATTTTACCACCCAACTGGTCCAGTGCAATGGCATTTCGAGCATTGTGTATCTTGACATTACAACCGAATACTAATACATTATTACCTAGTAGGGAGCTATCCTGCAGCAATCATCcacaaattgttttgtttcgtAAAAGACTTCGAGTTCTTTTATACTCTACCACGCTACTAAGTCGCCTGCATCCCTCCATGGTGGGTATTACTATtgaatcaaatgaaaatattaatcCAATCAGGAGTCGAAGTTTAGTTTTGTTAAGTAAAATTGCGGATAAAACCATTCCATCGATTAGACGCAAACGTAAAAATTCGCTTGCAGTCGAAGAtgaaattgatattaaaattgaacAGACACTTGGTCTTTAA
- Protein Sequence
- MSKEKDCPHPVANVDTTNIEDALAHNIKMQKELLAFRQLIQNTLKTVQDVYNTNEELIKNKMKRKSRGFGIKGAYLRGGTFFLKGNMFFKDLNCRNCPNNKDYEYRQNRGEFFPMDLELCGRHVWSLRDKQDVVDGVKEQVIQHLTDTRNIEPHKILHFKKSGNEKLVTLLSYVTDGFHIDWQQISKHNLRRRHSATSCEAIWNVYLNPVLKRTTWTMEENKMLLEAAKAYNFQNWAAIAAQVGKRSEFQCFVQYQNNVCYMLPERWTKWSKKDDKRLVEIVAKNTFNNVVNWNNVMAHFPYKPKTTIQARYSYTLNPHISHAPFTPEEDLLLLAAVEEYGTKFSRLPKTLFPHRTVIQLRSRYKNTILHRNKLQPWTVEDDKKLLDFVSEHGTSSWLQCQDVMGNHTRTSCRTRYLTIQKFFEKNPNASLEDIPRKKNYTPSHNITPENWVEKLAELKSNPQMNLKQKHKTRKRKKSTPNNLPVAKKVKRCSGEAEETEFIANRTTKTHEQKSCRKKPIYVKRLRNVGLQFYDFFKYAFNFQLGDDPIRKMPENAFLLKLVSHLLEFPLRKDFCFNGNLSQEAIHACKNLLEWKTKDCSEMEMETSDILPPNWSSAMAFRALCILTLQPNTNTLLPSRELSCSNHPQIVLFRKRLRVLLYSTTLLSRLHPSMVGITIESNENINPIRSRSLVLLSKIADKTIPSIRRKRKNSLAVEDEIDIKIEQTLGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01114942; iTF_00384505;
- 90% Identity
- -
- 80% Identity
- -