Ofri009701.1
Basic Information
- Insect
- Ornithomya fringillina
- Gene Symbol
- bab2
- Assembly
- GCA_963978525.1
- Location
- OZ021692.1:7050378-7066780[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5 5.2e+03 -2.7 0.4 2 15 539 552 538 553 0.83 2 2 1.4e-17 2.9e-14 52.6 0.0 1 43 651 694 651 696 0.95
Sequence Information
- Coding Sequence
- ATGGACTTGACTAAAGATAATATGgatttttcattgaaattacaaaattctaaTATTACAACGGCAGCAGCAGCCGCAACTACAGAGTCTTCCAATAAGAACTGTCAAGGATCGCCTCTTGAAATAGGGCTAATTGTTGAAGGAAATACTATAAACATGAATACTTTTGATAAGTTACAAAAATCCTCCACACCAGAGCTATTGGAAAATGCTGCAAAGATGGCTACAAAAGTAGCCGCAGATGGACAATTAACACCACCACCCCGACCAATGACCTCAAGTGAGGTGGTGGGTTTTACAATATTCGAAGATACCGAAATGAATTTGGATACCACACTAGGAATAAAACCGTGTCGCTCTTTGCCAGCTTCACCTAATCATTTGAAAAGTATACAAATGCCACCATTATTTGACTTTAGGTCTAATAAACCTTTCGTAGCAGCAGCGGCAGCACCTGAAGCTGAACCCAAAGTAATTAAACTGTCAGCTGATGAGCCGGATATTGTTAAGCGTAAATTTAAACCCGCCCCATGCAATAACAATAGTCAACAATTTTGTTTGCGTTGGAACAATTATCAGAACAATCTTACGAATGTATTTGATGAGCTATTGCAAAATGAATCGTTTGTGGATGTGACCTTGGCTTGTGAGGGCCAATCAATAAAAGCCCACAAAATGGTATTGTCCGCTTGCTCACCTTACTTTCAAGCACTTTTCTATGATAATCCCTGCCAACATCCTATTGTGATTATGCGTGATGTTGGTTGGCAGGAGTTAAAGACTTTAATGGAGTTTATGTATAAGGGTGAAATTAATGTTAGTCAAGATCAAATCAATCCGTTGCTAAGAGTAGctgaaatgttaaaaatacgAGGTTTAGCTGAGGTTAGTGCTAATCGTACTACAGCTACTCAGCATCCATTGATCTTGGAGCAGCGCATGACTGTTTATGAGAGTGATGAAGAGAAGAATAATGTTGCTAGTGATAAAGTGAATGGTAAAAGTAGATGCAGTGGTGGAGGTGATTCAGATGAAAGTCAGGCAGCTAAACGTCCCCGATTAAATACAGAAATCGAGTCTGATGATGGTGTTGCAAAACAAGATTTACAGAACTTGCATGCTGTACGTATGCGAAAACGTTCTCGAGATGGTCATTTGATTGATGGAGATCGTTTTTCAAACAATAAGAATTATGACAACTTACACGCTAGTTCACCAGCACGTGAGGAACACATATCCGCCAACCCTTCAATAGCGGGTTCAGTTGCAACGGCATTGACAACGTCCACCATTGTACGTAATCCTTTTGCCTCTCCTCCCAATCAACTTAGTCAGACATCGTCTAATGCtgaaaatgagaaaatatcTTCACCAAACGAACTACCAGCGTCATACCGTTCAATGGCGCGCAATTGTTCACCATCACAGAGCAGCAATAGTGGGGATGTCGGCGTACGGTCTGCATTGGTTTCTCCAACAGATACAAATCAATTACCGTTACATGCACGCCCAGCCGCCGATGTAGCAGCAGCCTTTACAAACCCTAATCATCCACATCACAGGGCAGCTCAACAATTGGCCGCTCATCATCAACTGCATGCTGCAGCTCAGTCGCATGCTGCAATGGCTACAGCATTAGCTGCAGCAGCATCTGGTACTAATACTATACCAGGTGTTTCAAATACTGCCAGCACAACAGTCAACACACCGACTCCACTTCACGACGATATGGAAATTAAACCAGAAATTGCTGAAATGATACGCGAGGAGGAAAGGGCAAAACTAATTGAAAGTGGTCACCCGTGGTCGGGTGGGGGTTCAACTAATTCTTCAGTCACAgAAAGCTATCAATATCAGTTGCAGTCaatgtggcaaaaatgttGGAGCACCAATCAACAAAATCTTGTTCAACAATTAAGATTTCGTGAACGGGGACCATTAAAATCGTGGCGACCAGAAGCAATGGCTGAGGCCATATTTAGTGTTCTCAAAGAAGGTCTTTCACTATCGCAAGCAGCACGAAAATACGATATTCCATATCCAACATTTGTACTATATGCCAATCGTGTACACAATATGTTGGGACCGTCTTTAGATGGTGGTTCAGATCCTCGCCCGAAAGCTAGAGGTAGACCGCAACGTATTTTACTTGGCATGTGGCCAGAGGAATTAATACGTTCGGTTATTAAGGCTGTAGTGTTTAGGGATTATCGTGAATTTAAAGATGATATGGGTAACCTACCATTCGTCAACGGTCAACCACATATGTCCACTCACTTTGCTTCACCCAATGCAATTATGACAAATGGTTTGCCCACTGCCGCTAAATTAGCACAAAATGCTGCTGTCCTGGCATCTCAAGACTCTGCCAGTCCCCTTAATACAATGACAGAAAACTTTCGCCGTCATTTAATAtcacaacagcagcagcaacagcaacagcaacagcagcagcatcaatCACCGGTTTCTCAAAGTGTTAACATGTACAAATCACCAGCATATTTGCAACGTTCCGAAATGGATGAAGCCAGTCTAGAAATGGTGGCTCTCGCCAAACAGAAGAATGAACGTCGCTTACCGGATAATTTGGCTGATTTGAATAAATTAGGTTTAATGGGTATGCCGGGTATGGGTGGTGGTGTTATGCCGACGGCAAATAGCCGCGGAAATCAAATGCCTACAAATTTATATCCGACGGAATGTGATTTAGAGCATGATAGAGAACGTAATCGGGCCAAAGAGCGTGAATTTAAAGATACCATGCAAGCTCGACAATTTGGTGGTAGAAGTGTTGTACCGGGTGGAGATTCGCGCATGCAATCGTCCCTATCATTTAGTTCGAGATCCACCTCACCTTATACATCATATTTAAAAGGCAAAGAGGCCAATCAATcggtttataataaaagattaTTGGATAGCTTACCGCCGGGCATTGATTTTGAAGCTATAGCCAATGGATTGTTGCAGAAGAGCGTCTCTAAAAGTCCGCGCTTCGAAGATCTCTTCTCCGGCCAAGAAATGAATGAACTTTTAATTAATCCTGAAGCAAATACTGCAACAGCACCACCAAATACTTCGTCATGTTCATCGCCTCAACGGGATCATCTAATGAAGATCAAATTGGAACAACAGCAAATTGGGGATATGCCGCATGAAGATTGA
- Protein Sequence
- MDLTKDNMDFSLKLQNSNITTAAAAATTESSNKNCQGSPLEIGLIVEGNTINMNTFDKLQKSSTPELLENAAKMATKVAADGQLTPPPRPMTSSEVVGFTIFEDTEMNLDTTLGIKPCRSLPASPNHLKSIQMPPLFDFRSNKPFVAAAAAPEAEPKVIKLSADEPDIVKRKFKPAPCNNNSQQFCLRWNNYQNNLTNVFDELLQNESFVDVTLACEGQSIKAHKMVLSACSPYFQALFYDNPCQHPIVIMRDVGWQELKTLMEFMYKGEINVSQDQINPLLRVAEMLKIRGLAEVSANRTTATQHPLILEQRMTVYESDEEKNNVASDKVNGKSRCSGGGDSDESQAAKRPRLNTEIESDDGVAKQDLQNLHAVRMRKRSRDGHLIDGDRFSNNKNYDNLHASSPAREEHISANPSIAGSVATALTTSTIVRNPFASPPNQLSQTSSNAENEKISSPNELPASYRSMARNCSPSQSSNSGDVGVRSALVSPTDTNQLPLHARPAADVAAAFTNPNHPHHRAAQQLAAHHQLHAAAQSHAAMATALAAAASGTNTIPGVSNTASTTVNTPTPLHDDMEIKPEIAEMIREEERAKLIESGHPWSGGGSTNSSVTESYQYQLQSMWQKCWSTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGSDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREFKDDMGNLPFVNGQPHMSTHFASPNAIMTNGLPTAAKLAQNAAVLASQDSASPLNTMTENFRRHLISQQQQQQQQQQQQHQSPVSQSVNMYKSPAYLQRSEMDEASLEMVALAKQKNERRLPDNLADLNKLGLMGMPGMGGGVMPTANSRGNQMPTNLYPTECDLEHDRERNRAKEREFKDTMQARQFGGRSVVPGGDSRMQSSLSFSSRSTSPYTSYLKGKEANQSVYNKRLLDSLPPGIDFEAIANGLLQKSVSKSPRFEDLFSGQEMNELLINPEANTATAPPNTSSCSSPQRDHLMKIKLEQQQIGDMPHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00384501;
- 90% Identity
- iTF_01114331;
- 80% Identity
- iTF_01115088;