Basic Information

Insect: Crataerina pallida
Gene Symbol: bab2
Assembly: GCA_949710015.1
Location: OX453292.1:24378752-24394949[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 2.5 4.8e+03 -2.7 0.4 2 15 540 553 539 554 0.83

2 2 1.4e-17 2.7e-14 52.6 0.0 1 43 652 695 652 697 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	2.5	4.8e+03	-2.7	0.4	2	15	540	553	539	554	0.83
2	2	1.4e-17	2.7e-14	52.6	0.0	1	43	652	695	652	697	0.95

Sequence Information

Coding Sequence: ATGGACTTGACTAAAGATAATATGgatttttcattgaaattacAAAATTCTAATATTACAACGGAAACAGCAGCCGCAACAACAGAGTCTTCCAATAAGAACTGTCAAGGATCGCCTCTTAAAATAGGGCTAATTGAAGTGGAAGGAAATACTATAAGCATGAATACTTTTGATAAGTTACAAAAATCCTCCACACCAGAGCTATTGGAAAATGCGGCAAAGATGGCTACAAAAGTAGCCGCAGATGGACAATTAACGCCACCACCCCGACCAATGACCTCAAGTGAGGTGGTGGGTTTTACAATATTCGAAGATACCGAAATGAATTTGGATCCCACATTAGGAATAAAACCGTGTCGCTCTTTGCCAGCTTCACCCAATCATTTGAAAAGTATACAAATGCCACCATTATTTGACTTTAGATCTAGTAAACCTTTCGTAGCAGCAGCTTCAGCACCTGAAGCTGAACCGAAAGTGATTAAACTGTCAGCTGATGAACCGGATATTGCTAAGCGTAAATTTAAACCCGCCCcatgcaacaacaatagtcAACAATTTTGTTTGCGTTGGAACAATTATCAGAATAATCTTACGAATGTATTTGATGAACTATTGCAAAATGAATCGTTTGTGGATGTGACCTTGGCTTGTGAGGGCCAATCAATAAAAGCCCACAAAATGGTATTGTCCGCTTGCTCACCTTACTTTCAAGCACTTTTCTATGATAATCCCTGCCAACATCCTATTGTGATTATGCGTGATGTTGGTTGGCAGGAGTTAAAGACTTTAATGGAGTTTATGTATAAGGGTGAAATTAATGTTAGTCAAGATCAAATCAATCCGTTGCTAAGAGTAGctgaaatgttaaaaatacgAGGTTTAGCTGAGGTCAGTGCTAATCGTATGGCTACAGCTACTCAGCATCCATTGATCTTGGAGCAGCGCATGACTGTTTATGAGAGTGATGAAGAGAAGAATAATGTTGCTAGTGATACAGTGAATGGCAAAAGTAGATGCAGTGGAGGAGTTGATTTAGATGAAAGTCAGGCGGCTAAACGTCCCCGATTAAATGCAGAAATCGAGTCTGATGATGGTGCAAAACAAGATTTACAGAACTTGCATGCTGTACGTATGCGAAAACGTTCTCGAGATGGTCATTTGATTGATGGTGATCGTTTTTCAAACAATAAGAATTACGACAACTTACACGCTAGTTCACCAGCACATGAGGAACACATATCCGCCAACCCTTCAATAGCGGGTTCAGTTGCGACGGCATTGACAACGTCCACCATTGTACGTAATCCTTTTGCCTCTCCTCCCAATCAACTTAGTCAGACATCGTCTAATGCTGAAAATGAGAAAATATGTTCACCAAACGAACTACCAGCGTCATACCGTTCAATGGCGCGCAATTGTTCACCATCACAGAGCAGCAATAGTGGGGATGTCGGCGTAAGGTCTGCATTGGTTTCTCCAACAGATACAAATCAATTACCGTTACATGCACGCCCAGCCGCCGATGTTGCAGCAGCCTTTACAAACCCTAATCATCCACATCACAGGGCAGCTCAACAATTGGCCGCTCATCATCAACTACATGCTGCAGCTCAGTCGCATGCTGCAATGGCTACAGCATTAGCTGCAGCAGCATCTGGTACTAATACTATACCGGGTGTTTCAAATACTTCCAGCACAACAGTCAACACACCAACTCCACTTCACGACGATATGGAAATTAAACCAGAAATTGCTGAAATGATACGCGAGGAGGAAAGGGCAAAACTAATTGAAAGTGGTCACCCGTGGTCGGGTGGGGGTTCAACTAATTCTTCTGTCACagAAAGCTATCAATATCAGTTGCAGTCAATGTGGCAAAAATGTTGGAGCACCAATCAACAAAATCTTGTTCAACAATTAAGATTTCGTGAACGGGGACCATTAAAGTCGTGGCGACCAGAAGCAATGGCTGAGGCCATATTTAGTGTTCTCAAAGAAGGTCTTTCACTATCGCAAGCGGCACGGAAATACGATATTCCATATCCAACATTTGTACTATATGCCAATCGTGTACACAATATGTTGGGACCGTCTTTAGATGGTGGTTCAGATCCTCGCCCGAAAGCTAGAGGTAGACCACAACGTATTTTACTTGGCATGTGGCCAGAGGAATTAATACGTTCGGTTATTAAGGCTGTAGTGTTTAGGGATTATCGTGAATTTAAAGATGATATGGGTAACCTACCATTCGTCAACGGTCAACCACATATGTCCACTCACTTTGCTTCACCCAATGCAATTATGACAAATGGTTTGCCCACTGCCGCTAAATTAGCACAAAATGCTGCTGTCCTGGCATCTCAAGACTCTGCGAGTCCCCTTAATACAATGACAGAAAACTTTCGCCGTCATTTAATAtcacaacagcagcagcaacagcagcagcatcaatCACCGGTTTCTCAAAGTGTTAACATGTACAAATCACCAGCATATTTGCAACGTTCCGAAATGGATGAAGCCAGTCTAGAAATGGTGGCTCTCGCCAAACAAAAGAATGAACGTCGCTTACCGGATAATTTGGCTGATTTGAATAAATTAGGTTTAATGGGTATGCCGGGTATGGGTGGTGGTGTTATGCCGACGGCAAGTAGCCGCGGAAATCAAATGCCCACAAATTTATATCAGACGGAATGTGATTTAGAGCATGATAGAGAACGTAATCGGGCCAAAGAGCGTGAATTTAAAGATACCATGCAAGCTCGACAATTTGGTGGTAGAAGTGTTGTACCGGGTGGAGATTCGCGTATGCAATCGTCCCTATCATTTAGCTCGAGATCCACCTCACCCTATACATCATATTTAAAAGGTAAAGAGGCCAATCAATCGGTTTATAATAAGAGATTGTTGGATAGCTTGCCGCCGGGCATTGATTTTGAAGCTATAGCCAATGGATTGTTACAGAAGAGCGTCTCTAAAAGTCCGCGCTTCGAAGATCTCTTCTCCGGCcaagaaatgaatgaaattttaattaatcctGAAGCAAATGCTGTAGCAGCACCACCAAATACTTCGTCATGTTCATCGCCTCAACGGGATCATCTAATGAAGATCAAATTGGAACAACAGCAAATTGGGGATATGACGCATGAAGATTGA
Protein Sequence: MDLTKDNMDFSLKLQNSNITTETAAATTESSNKNCQGSPLKIGLIEVEGNTISMNTFDKLQKSSTPELLENAAKMATKVAADGQLTPPPRPMTSSEVVGFTIFEDTEMNLDPTLGIKPCRSLPASPNHLKSIQMPPLFDFRSSKPFVAAASAPEAEPKVIKLSADEPDIAKRKFKPAPCNNNSQQFCLRWNNYQNNLTNVFDELLQNESFVDVTLACEGQSIKAHKMVLSACSPYFQALFYDNPCQHPIVIMRDVGWQELKTLMEFMYKGEINVSQDQINPLLRVAEMLKIRGLAEVSANRMATATQHPLILEQRMTVYESDEEKNNVASDTVNGKSRCSGGVDLDESQAAKRPRLNAEIESDDGAKQDLQNLHAVRMRKRSRDGHLIDGDRFSNNKNYDNLHASSPAHEEHISANPSIAGSVATALTTSTIVRNPFASPPNQLSQTSSNAENEKICSPNELPASYRSMARNCSPSQSSNSGDVGVRSALVSPTDTNQLPLHARPAADVAAAFTNPNHPHHRAAQQLAAHHQLHAAAQSHAAMATALAAAASGTNTIPGVSNTSSTTVNTPTPLHDDMEIKPEIAEMIREEERAKLIESGHPWSGGGSTNSSVTESYQYQLQSMWQKCWSTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGSDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREFKDDMGNLPFVNGQPHMSTHFASPNAIMTNGLPTAAKLAQNAAVLASQDSASPLNTMTENFRRHLISQQQQQQQQHQSPVSQSVNMYKSPAYLQRSEMDEASLEMVALAKQKNERRLPDNLADLNKLGLMGMPGMGGGVMPTASSRGNQMPTNLYQTECDLEHDRERNRAKEREFKDTMQARQFGGRSVVPGGDSRMQSSLSFSSRSTSPYTSYLKGKEANQSVYNKRLLDSLPPGIDFEAIANGLLQKSVSKSPRFEDLFSGQEMNEILINPEANAVAAPPNTSSCSSPQRDHLMKIKLEQQQIGDMTHED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00384650; iTF_01114938; iTF_01115088; iTF_01114331; iTF_01114136;
90% Identity: iTF_01114331;
80% Identity: iTF_00384650;