Basic Information

Insect: Ornithomya fringillina
Gene Symbol: ct
Assembly: GCA_963978525.1
Location: OZ021693.1:25660941-25692134[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.6e-27 3.5e-23 81.5 0.0 3 72 999 1069 997 1074 0.94

2 3 9.1e-32 5.8e-28 96.8 0.0 3 77 1431 1506 1429 1508 0.96

3 3 1.9e-31 1.2e-27 95.8 0.0 3 77 1686 1761 1684 1763 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.6e-27	3.5e-23	81.5	3	72	999	1069	997	1074	0.94
2	3	9.1e-32	5.8e-28	96.8	3	77	1431	1506	1429	1508	0.96
3	3	1.9e-31	1.2e-27	95.8	3	77	1686	1761	1684	1763	0.96

Sequence Information

Coding Sequence: ATGAGAGCCACCTTAGCTGAAAAGGAAGTAAACACGCTTAAAGAACAATTATCAACCAATATATCCACAGCAGACACAAACGTTGAGAGTGAAAATCGTACAGGCAATTTagttgtaacaacaacaactaatagCAATAATAGCTTGGATACAGTTggggcagcagcagcagtcaCAACTACAGCAACATTAATCCCACCAAACGCACTCTTATCACCGTCAACCATAAACAGCATTaatcacaataacaataataataataacaacaacaataacaacactaataataaattgttgaatAGTGTTGCCGCAGCCATAAGTCTACAAAACGGTGGTAATCTATTAGCGACAACGCCTTCACCCTCCCCACCACTGTGCGATAACAACGGCATTGCCGGTACGGGTCAATTAAACGGTTGCTTAAAtccaaaattgtttttcaatcACGCTCAACAAGTTATGATGATGGAAGCTGCTGCTGCCGCCGCTGCAGCTGCGGCTGCTACTAGCGTACAACAGCAATCACCACTACATTCACCACAACCTGCAATACAAAGATCAGAAAACGAAATGTTATCCTGCGGcgtcaataataataacaacaacaacaaccccaCCACCAATATTGACGACACCAAGAAAACGTTAGATAACACGCATAAATCCTCAATGGGTAGCGGTGGTAATTTATCCAGTACAGCAATGGAATTTGAAGATCATCGTACTAGTGTCGGGCCGGAGGAGGATTCTAGTCGAAACAATGAAAATCAACCAACGGCCAATGAATTGAGTGCAACTGGTAGTGAtcgaaagaataataatagtaataataataataataacaacaacaatagcagtaTCTATAGATCAAGTAGTGTTAGCACAAATTTATCTAATTCATCGTTAagtacaaatgaaaattgtacGGAGATGCAAGAAGAAAGTATCGCCATTGAGGTGCGAAATATTAATCGTATAGAAATGGAGAGCAGTGCATGTAGCGGGAAAGACTCGCAAGTGCCGACGACCTTATGTAGAGATCATCAAACTGATCAACAAACCCAAGATGTGTTATTAGCTGCCAAAGACAAAGAGATTAAAGTTCTCGTCGAGGAGGTGAATCGTCTTAGAACTTTggaacatacacatatgttaaAAATCCGTCGTTTGGAGGAGAATATAGATGCTAAGCAACAACACATTGTACGCTTACAGGCCTGCCTTAATAAACATCATTTAGAAGTGGTAGTAGAAGAAGTTAAAGGAGAGGAGGAAGAGGAGGAGAAAGGTGGAGATAAATCAATGGCATGTATAGAGGAATCATGTCAACAGCAGCCTTTAACGATTGTTAaggatgttgatgatgatatgGAAATGGAACAAACGGAAGCAAACTGTGATTCTGAAAAAGCgagccaacaacaacaacagcagcagcagcaacagaaaCAGCATTCAATAAccgaagaacaacaacaacaatcggaAGATGATGAATGCATTAAGCTGACCGAACATATGGGTGaaatcaatattaaaaagGAAACACAAAGTCCTTTAACATTGGATGCATTATCGCAACAGAATGCAGCTATTGCCGCGGCTGCAGCGGCGGCAGTCGCCTGTAATAATGATCCCAATAAATTTCAAGAATTATTAATGGAACGAACTAAAGCATTAGTGGCGGCTGAAGTGTTAAAGAATTCAGAGGAACCAACAATAGAgcaagaagaagatgaaaatgatgataatgaagaagaagaagaatatccCAATGATAATAATGTAGCTAatgtaagtgaaaatgttgcgCAACATGTTGATGAGATGTTTAGGGtaccaaaaattgaaatagaaattgaagatgatgatgataatgatggtgatgatgatgacaacaAAAGTTTGGATGATTGCGATAATTTGGAAAAACAATTAGAACGGCATGAAAATATACCGAAACCTATGACGGAGAATTGTTTATTGCCAGCAGATGAGAAATTATCAGccataacaacagcaacaacaacaacaacaaccactgaaacaacaacaacaaatgtcgATTTAACTTCAGCCAATTTTAGACGTAACGTGGAACGTTTCGGTTCATTGTTAGGTGAGGAATTAGTCAACTCATATTGGAGGCGTAGTTTTGATATGtccttaaataataataataataataataacaataataataatgttgcaAAAACTACGCAACATcaccaacatcatcatcatcatcatcagcaacatATGATGTTGCAACAAGCCGTCCATCATCAACACCAGCAGCAGTCACACTTAACACACCATCACCATTTAGAGCAACAGCCCCAGTTAGAATCACagcatcaacagcaacaacaacaacagcaacatcacCACTCCCAACATGGACCTTCTTCTACCGCTTTGCTTAGTCAATTAGTTAATTCCACATTTGCCTCCCAACATAACCCCACTCAAACGAATTCTTCTACTCTTCGTTCTACAGATGCTATGAACCAACAACATATGCCACCAACACACCATCACAGTCAACCATTAGCattacatcatcatcatcaccagcaCCATATGTCGTCCGCCTCTAATGAACATCACGATCACAACAAATCCGCTCGCAGTCATCACGATTCGTCAGCCTCAAGTGCCAGTACACCGAATTTGCAAGATCATCGTTCCGGTGAAGAACACATTTTATCATCGTTGAATGGTTCACACAAATCATTggaagataataataatagtttgtGTGCCACACCTACCAATCCAATGGCTACAGCGCATCATATGCCACACGCCTTCCTGCCCGGTTTGCCATTCCAGTTTCAAGATCGTGGTCATTTTCATTTTGCCGAAGATATGCAACTACCGCCCGGTACTTCTATGGCTGGTCATCTGGGCGAATCGTTAATACCGAAAAGTGATCCCATGGAAGCTAAACTACAGGAAATGTTGCGCTACAATATGGACAAGTATGCCAATCAAGCATTAGATACTCTACACATATCAAGACGAGTCCGAGAATTGCTATCTGTCCACAACATTGGTCAGCGCATATTTGCCAAATATGTTCTTGGTCTGTCGCAAGGCACCGTATCTGAGCTCTTGTCGAAACCAAAACCATGGGATAAATTGACCGAAAAGGGGCGTGACAGTTATCGTAAAATGCATGCCTGGAGTTGTGATGAGAACGCCGTCATGCTGCTGAAATCGCTTATACCCAAAAAAGATTCTGGACTACCACCATATGGTGGACGAGAAGATGTTATGTCCGATGAGCGCATAGCTCATATTTTAAGTGAAACTTCCtcattaataaaaagttcTGCTTCATCAGCTTTACAACATTCATTCAAAGAAGATCAACAGCGACGCAGTCTTGAAGATTCACATGGTAACGAGGACTCTAAATCGCCATTGCAACATTCGACATCgccattttttaaagatcAGTTAAAATCAACACATGACTCCATGTTGCAGAATCCCAACATGCATATGCGTCCCGACGATATGAATCCGGAGAAAATGGCTCGTCTATATCACGAGATTATGTCTCGAGTCCCCAGAGATGCTTTCCCCGGTTTTGTGCTGAATCCATTTTTTAATAGCGCTCTACCCAGTGCTGCTAGTGTTGGAAACAGCAGTAATGCTTTTCCCAGTCTCACCGGAGAGGACAACGTACGTGTAGCTTTTGAACGTGAAATGGTGAAAATGCAACATcagcatcaacatcatcatcaacagcagcaatcAGGCTTCCCCAGTTTTTCCAATTTACTCGCTTTGCAGCAACAAATGTTAAATGGAGCGCAAGACTTAAGTGTTGGCAAGGAAATGCCTGTTAAGGAAGGGAAAAATACTGCAACGAGAAATTCTTTTGATTCAGTGCCCAGTGTTGGTTCAATTGACAGCTCAAGTAGTGTTGCTCAGAATACACCAAATGCCAAAGAAAACTCTTCAACGAGTGTAGAACGATTATATTCGGGAATGTCGCAATCTGACGGAGGCAATATTACGCCCGTTCCACAAACTTCCAACAACGCACCGTCACAAAATACCAATTCGGCAGCACCAAGTCCCCTCAGTAATAGTATCCTACCACCAGCTATGGCAGTAAGTGAAGAATTTTCTTCAACTGCCAGCCCTTTACAACGCATGGCTTCCATTACGAATAGTCTAATAACACAGCCTCCCATTCCACCTCATCATCCACAACCACAACGTCCTACTAAAGCCGTACTACCGCCCATAACCCAACAACAGTTTgatatgtttaataatttaaacactGAAGATATTGTTCGAAGAGTTAAGGAGGCATTGTCTCAATACTCTATATCACAGCGTTTATTCGGAGAATCAGTGTTGGGTCTGTCGCAGGGATCTGTATCAGATCTATTAGCCCGCCCCAAACCATGGCATATGCTTACCCAAAAAGGTAGAGAACCTTTTATtcgcatgaaaatgtttctagAGGATGAAAACGCCGTACACAAGCTGGTGGCCAGTCAGTATAAGATTGCTCCGGAAAAGTTAATGCGCACTGGAAATTATAGTGGGGCACCTCAGTTACCTCAGGGCTTAGCCAATAAAATACAAGGCACTCTACCGATGCAAAAAATGATTAACGATTTAAAAATGCAGGAACCTACGCAAGCTCAACACATAATGCAACAAATGCAGGCAGCTGCTGTAATGTCAGCAGCTATGcagcaacagcatcaacaGCAGTCTCAACAAAATCACCACCATCAGGCGGCTGCCGCTGTTCAAGCTGTgcaagcagcagcagcacaaGCAGCACAACATCATCAAAGCATGCTGTTGACATCGCCCGGATTACCACCACAACATGCCATTCCCTTGCCAGCTGCCGCCAGCACCAACCCTAATCCACCTAATTCAATCGCACAAACCGGCCCCAGCGGTGGTGATAAAAAGCCTATGATGATGCCAATACACTCGCCCCATACATCCAATACTATGCGAAATATACACCAACATATGTCACCCACAGTGTACGAAATGGCGGCATTAACGCAAGACTTGGATACTCAAGTGATTACCACGAAAATTAAAGAAGCTTTGCTTACTAATAATATTGGACAAAAAATTTTCggtgaggctgtattaggtctATCTCAGGGGTCCGTATCTGAGCTACTAAGTAAACCGAAACCGTGGCATATGTTATCTATAAAGGGACGTGAACCATTTATTCGCATGCAACTGTGGCTGTCTGATCCCAACAACGTAGAACGTTTACAGGTGTTGAAAAATGAAAGGCGCGAAGCTTCTAAGCGGCGTCGTTCGACAGGCCCCAATCAACAAGACAACAGTTCAGATACGTCCAGTAATGATACCAATGACTTTTATACTAGCAGCCCTGGACCTGGTTCAGTGGGTAGTTCAGTAAGTGGAGCCCCACcaaataaaaagcaaagaGTATTGTTTTCCGAGGAACAAAAAGAAGCGTTGCGTTTAGCTTTTGCTTTGGATCCTTATCCAAATCTTCAGACTATTGAATTTTTAGCTAATGAATTGGGTTTGGCCACGCGTACCATTACCAATTGGTTTCACAATCATCGAATGCGTTTGAAACAACAAGTGCCTCATGGACCACCCGGTGCCGAGAATCCAATACCTAGTCGAGAAAATACTAATGCCACGCCATTCGATCCCGTCCAATTCCgtatattattacaacaaagGTTACTTGAGTTACATAAGGAACGCATGGGCCTCACCGGCAATAATCCTTTACCTTACCCGCCCTATTTTGCTGCAGCTGCTCTTTTGGGGCGCAGCTTGGCAGGCATGCCGGGTGCTACCAGTACCGGACCAATAGCTGCTACCGAATCAGATTTGCAAGCATTAAATCAAGCTTTTAAAGAACAAATCTCTGGTTTGGATTTAAGCATGAGCTCTTTGAAACGGGAACGTCGCGATGACTTTGAAGATGATTTGGAAGGTAGCCACCTGAGTGATAATGAAAACGACTCTTTAGATGATGATGACAAAACTAGCGACTACAATAAAGATACGCCACGGTCTAGTTTAATAGGAGGTGGACGCTACTTAATGGGTGGATATGGGGGTGGTGGCATTATGCGTTCAAATCGTCGAAAGCCGGCTGCACCACAATGGGTAAATCCCGCTGGGCCCCCACCTATCCATCAGCCCATTCCAACCACAACCGAAATGGATCGTTTAATTAATGGAGTGTGTGTTATGCAAGGAACTGGTAATCAATCGGATGAGGCAAAATTAGTTCAAGCTGAAGACAATGTTAACAAACCTCACGAGTTAGGCATTCTCgacaatgaaaatgaaaacgaaacGCAACCTTTTCTAGAGCCAGAAATTGTAATCAAACAAGAGAAACTGGATTGTGAAGGTGATAACAATGAGCATGCATCGGCCACAGACGGAGACCATAAGGGTGAGGAGAATCTTAACGTAGTCCAAGACGAACACTTAAGAATGGTGCGAGTACATCGTCTTAGCGCTGAAGAAGAACACACTATGAATACAACACCAACGTGGAATTAttaa
Protein Sequence: MRATLAEKEVNTLKEQLSTNISTADTNVESENRTGNLVVTTTTNSNNSLDTVGAAAAVTTTATLIPPNALLSPSTINSINHNNNNNNNNNNNNTNNKLLNSVAAAISLQNGGNLLATTPSPSPPLCDNNGIAGTGQLNGCLNPKLFFNHAQQVMMMEAAAAAAAAAAATSVQQQSPLHSPQPAIQRSENEMLSCGVNNNNNNNNPTTNIDDTKKTLDNTHKSSMGSGGNLSSTAMEFEDHRTSVGPEEDSSRNNENQPTANELSATGSDRKNNNSNNNNNNNNNSSIYRSSSVSTNLSNSSLSTNENCTEMQEESIAIEVRNINRIEMESSACSGKDSQVPTTLCRDHQTDQQTQDVLLAAKDKEIKVLVEEVNRLRTLEHTHMLKIRRLEENIDAKQQHIVRLQACLNKHHLEVVVEEVKGEEEEEEKGGDKSMACIEESCQQQPLTIVKDVDDDMEMEQTEANCDSEKASQQQQQQQQQQKQHSITEEQQQQSEDDECIKLTEHMGEINIKKETQSPLTLDALSQQNAAIAAAAAAAVACNNDPNKFQELLMERTKALVAAEVLKNSEEPTIEQEEDENDDNEEEEEYPNDNNVANVSENVAQHVDEMFRVPKIEIEIEDDDDNDGDDDDNKSLDDCDNLEKQLERHENIPKPMTENCLLPADEKLSAITTATTTTTTTETTTTNVDLTSANFRRNVERFGSLLGEELVNSYWRRSFDMSLNNNNNNNNNNNNVAKTTQHHQHHHHHHQQHMMLQQAVHHQHQQQSHLTHHHHLEQQPQLESQHQQQQQQQQHHHSQHGPSSTALLSQLVNSTFASQHNPTQTNSSTLRSTDAMNQQHMPPTHHHSQPLALHHHHHQHHMSSASNEHHDHNKSARSHHDSSASSASTPNLQDHRSGEEHILSSLNGSHKSLEDNNNSLCATPTNPMATAHHMPHAFLPGLPFQFQDRGHFHFAEDMQLPPGTSMAGHLGESLIPKSDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRIFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWSCDENAVMLLKSLIPKKDSGLPPYGGREDVMSDERIAHILSETSSLIKSSASSALQHSFKEDQQRRSLEDSHGNEDSKSPLQHSTSPFFKDQLKSTHDSMLQNPNMHMRPDDMNPEKMARLYHEIMSRVPRDAFPGFVLNPFFNSALPSAASVGNSSNAFPSLTGEDNVRVAFEREMVKMQHQHQHHHQQQQSGFPSFSNLLALQQQMLNGAQDLSVGKEMPVKEGKNTATRNSFDSVPSVGSIDSSSSVAQNTPNAKENSSTSVERLYSGMSQSDGGNITPVPQTSNNAPSQNTNSAAPSPLSNSILPPAMAVSEEFSSTASPLQRMASITNSLITQPPIPPHHPQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGAPQLPQGLANKIQGTLPMQKMINDLKMQEPTQAQHIMQQMQAAAVMSAAMQQQHQQQSQQNHHHQAAAAVQAVQAAAAQAAQHHQSMLLTSPGLPPQHAIPLPAAASTNPNPPNSIAQTGPSGGDKKPMMMPIHSPHTSNTMRNIHQHMSPTVYEMAALTQDLDTQVITTKIKEALLTNNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDPNNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPNKKQRVLFSEEQKEALRLAFALDPYPNLQTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPPGAENPIPSRENTNATPFDPVQFRILLQQRLLELHKERMGLTGNNPLPYPPYFAAAALLGRSLAGMPGATSTGPIAATESDLQALNQAFKEQISGLDLSMSSLKRERRDDFEDDLEGSHLSDNENDSLDDDDKTSDYNKDTPRSSLIGGGRYLMGGYGGGGIMRSNRRKPAAPQWVNPAGPPPIHQPIPTTTEMDRLINGVCVMQGTGNQSDEAKLVQAEDNVNKPHELGILDNENENETQPFLEPEIVIKQEKLDCEGDNNEHASATDGDHKGEENLNVVQDEHLRMVRVHRLSAEEEHTMNTTPTWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00384364;
90% Identity: iTF_01114102;
80% Identity: iTF_01114912;