Cpal007086.1
Basic Information
- Insect
- Crataerina pallida
- Gene Symbol
- ct
- Assembly
- GCA_949710015.1
- Location
- OX453291.1:1500335-1531702[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.5e-27 3.2e-23 81.5 0.0 3 72 993 1063 991 1068 0.94 2 3 9.1e-32 5.3e-28 96.8 0.0 3 77 1425 1500 1423 1502 0.96 3 3 1.9e-31 1.1e-27 95.8 0.0 3 77 1680 1755 1678 1757 0.96
Sequence Information
- Coding Sequence
- ATGAGAGCCACCTTAGCTGAAAAGGAAGTAAACACGCTTAAAGAACAATTATCAACCAATATATCCACAGCAAACACAAACGTTGAGAGTGAAAATCGTACAGGCAATTTagttgtaacaacaacaactaatagCAATAATAGCTTGGATACAGTtggagcagcagcagcagtcaCAACTACAGCAACATTAATCCCACCAAACGCACTCTTATCACCATCAACCATAAACAGCAttaatcacaacaacaacaataataataacaacactaataataaattgttgaaTAGTGTTGCCGCAGCCATAAGTCTACAAAACGGTGGTAATCTATTAGCGACAACGCCTTCACCCTCCCCACCACTGTGCGATAACAACGGCATTGCCGGTGCGGGTCAATTAAACGGTTGCTTAAATccaaaattgtttttcaatCACGCTCAACAAGTTATGATGATGGAAGCTGCTGCTGCCGCCGCTGCAGCTGCGGCTGCTAATAGcgtacaacaacaatcaccACTACATTCACCACAACCTGCAATACAAAGATCAGAAACCGAAATGTTATCCTGCGGcgtcaataacaataacaacaacaaccccaCCACCAATATTGACGACACCAAGAAAATGTTAGATAATACGCATAAATCCTCAATGGCTAGCGGTGGTAATTTATCCAGTACAGCAATAGAATTTGAAGATCATCGTACTACTGTTAGGCCGGAGGAGGATTCTAGTCGAAACAATGAAAATCAACCAACGGCCAATGAATTGAGTGCAACTGGTAGTGAtcgaaagaataataatagtaataataataataataacaacaacaatagcagtATCTATAGATCAAGTAGTGTTAGCACAAATTTATCTAATTCATCGATAagtacaaatgaaaattgtacGGAGATGCAAGAAGAAAGTATCGCCATTGAGGAGCGAAATATTAATCGTGTAGAAATGGAGAGCAGTGCATGTAGCGGGAAAGACTCGCAAGTGCCGACGACCTTATGTAGAGATAATCAAACTGATCAACAAACCCAAGATGTATTATTAGCTGCCAAAGACAAAGAGATTAAAGTTCTCGTCGAGGAGGTGAATCGTCTTAGAACTTTggaacatacacatatgttaaAAATCCGTCGTTTGGAGGAGAATATAGATGCTAAGCAACAACACATTGTACGCTTACAGGCCTGCCTTAATAAACATCATTTAGAAGTAGTAGTAGAAGAAGTTAAAGGAGAGGAGGAAGAGGAGGAGAAAAGTGGAGATAAATCAATGGCACGTATAGAGGAATCATGTCAACAGCAGCCTTTAACGATTGTTAaggatgttgatgatgatatgGAAATGGAACATATGGAAGCAAACTTTGATGCTGAAAAAGCgagccaacaacaacaacagcaacagcattcAATAACCGAagaacaccaacaacaatcgGAAGATGATGAATGCATTAAGCTGACCGAACATATGGGTgaaatcaatattaaaaaggaAACACAaaGTCCTTTAACATTGAATGCATTATCGCAACAGAATGCAGCTATTGCCGCGGCTGCAGTGGCGGCAGTCGCCTGTAATAATGATCCCAATAAATTTCAAGAATTATTAATGGAACGAACTAAAGCTTTAGTGGCGGCTGAAGTTTTAAAGAATTCAGAGGAACCAACAATAGAccaagaagaagatgaaaatgatgataatgaagaagaagaagaatatccCAATGATAATAATGTAGCTAatgtaagtgaaaatgttgcacAACATGTTGATGAGATGTTTAGGGtaccaaaaattgaaatagaaattgaagatgatgatgataatgatggtgatgatgatgatgacaacaAAAGTTTGGATGATTGCGATCATTTGGAAAAACAATTAGAACGGCATGAAAATATACCGAAACCTATGACGGAGAATTGTTTATTGCCAGCAGATGAGAAATTATCAGccataacaacagcaataacaacatcagcaaccactgaaacaacaacaacaaatgtcgATTTAACTTCAGCCAATTTTAGACGTAACGTGGAACGTTTCGGTTCATTGTTAGGTGAGGAATTAGTCAACTCGTATTGGAGGCGTAGTTTTGATATGtccttaaataataataataataataataataataataacaataataataatgttgcaAAAGCTACGCAGCATcaccaacatcatcatcatcatcatcagcaacatATGATGTTGCAACAAGCCGTCCATCATCAACACCAGCAGCAGTCACACTTAACACACCATCACCATTTAGAGCAACAGCCCCAGTTAGAATCACagcatcaacagcaacaacaacaacagcaacatcaccACTCCCAACATGGACCTTCTTCTACCGCTTTGCTTAGTCAATTAGTTAATTCCACATTTGCCTCCCAACAAAACCCCACTCAAACGAATTCTTCTACTCTTCGTTCTACAGATGCTATGAACCAACAACATATGCCACCAACACACCATCACAGTCAACAATTAGCattacatcatcatcatcaccagcACCATATGTCATCCGCCTCTAATGAACATCACGATCACAACAAATCCGCTCGCAGTCATCACGATTCGTCAGCCTCAAGTGCCAGTACACCGAATTTGCAAGATCATCGTTCCGGTGAAGAACACATTTTATCATCGTTGAATGGTTCACACAAATCATTagaagataataataatagtttgtGTGCCACACCTACCAATCCAATGGCTACAACGCATCATATGCCACACGCCTTCCTGCCCGGTTTGCCATTCCAGTTTCAAGATCGTGGTCATTTTCATTTTGCCGAAGACATGCAGCTACCGCCCGGTACTTCTATGGCTGGTCATCTGGGCGAATCGTTAATACCGAAAAGTGATCCTATGGAAGCTAAACTACAGGAAATGTTGCGCTACAATATGGACAAGTATGCCAATCAAGCATTAGATACTCTACACATATCAAGACGAGTCCGAGAATTGCTATCTGTCCACAACATTGGTCAGCGTATATTTGCCAAATATGTTCTTGGTCTGTCGCAAGGCACCGTATCTGAGCTCTTGTCGAAACCAAAACCATGGGATAAATTGACCGAAAAGGGACGTGACAGTTATCGTAAAATGCATGCCTGGAGTTGTGATGAGAACGCCGTCATGCTGCTGAAATCGCTTATACCCAAAAAAGATTCTGGACTACCACCATATGGTGGACGAGAAGATGTTATGTCCGATGAGCGCATAGCTCATATTTTAAGTGAAACTTCCTCATTAATAAAAAGTTCTGCTTCATCAGCTTTACAACACTCATTCAAAGAAGATCAACAGCGACGCAGTCTTGAAGATTCACATGGTAACGAGGACTCTAAATCGCCATTGCAACATTCGACATCGCCATTTTTTAAAGATCAGTTAAAATCAACACATGACTCCATGATGCAGAATCCCAACATGCATATGCGTCCCGACGATATGAATCCGGAGAAAATGGCTCGTCTATATCACGAGATTATGTCTCGAGTCCCCAGAGATGCTTTCCCCGGTTTTGTGCTGAATCCATTTTTTAATAGCGCTCTACCTAGTGCTGCTGGTGTTGGAAACAGCAGTAATGCTTTTCCCAGTCTCACCGGAGAGGACAACGTACGTGTAGCTTTTGAACGTGAAATGGTGAAAATGCAACATcagcatcaacatcatcatcaacagcagcaatCAGGCTTCCCCAGTTTTTCCAATTTACTCGCTTTGCAGCAACAAATGTTAAATGGAGCGCAAGACTTAAGTGTTGGCAAGGAAATGCCTGTTAAGGAAGGGAAAAATACTGCATCGAGAAATTCTTTTGATTCAGTGCCCAGTGTTGGTTCAATTGACAGCTCAACTAGTGTTGTTCAGAATACACCAAATGCCAAAGAAAACTCTTCAACGAGTGTAGAACGGTTATATTCGGGAATGTCGCAATCTGACGGAGGCAATATTACGCCCGTTCCACAAACTTCCAACAGCGCACCGTCGCAAAATACCAATTCGGCAGCACCAAGTCCCCTCAGTAATAGTATCCTACCACCAGCTATGGCAGTAAGTGAAGAATTTTCTTCAACTGCCAGCCCTTTACAACGCATGGCTTCCATTACGAATAGTCTAATAACACAGCCTCCCATTCCACCTCATCATCCACAACCACAACGTCCTACTAAAGCCGTACTACCGCCCATAACCCAACAACAGTTTgatatgtttaataatttaaacactGAAGATATTGTTCGAAGAGTTAAGGAGGCATTGTCTCAATACTCTATATCGCAGCGTTTATTCGGAGAATCAGTGTTGGGTCTGTCGCAGGGATCTGTATCAGATCTATTAGCCCGCCCTAAACCATGGCATATGCTTACCCAAAAAGGTAGAGAACCTTTTATTCgcatgaaaatgtttctaGAGGATGAAAATGCCGTACACAAGCTGGTGGCCAGTCAGTATAAGATTGCTCCGGAAAAGTTAATGCGCACTGGAAATTATAGTGGGGCACCTCAGTTACCTCAGGGCTTAGCCAATAAAATACAAGGCACTCTACCGATGCAAAAAATGATTAACGATTTAAAAATGCAGGAACCTACGCAAGCTCAACACATAATGCAACAAATGCAGGCAGCTGCTGTAATGTCAGCAGCTATGCAGcaacagcatcaacaacaGTCTCAACAAAGTCACCACCATCAGGCGGCTGCCGCTGTTCAAGCTGTgcaagcagcagcagcacaaGCAGCACAACATCATCAAAGCATGCTGTTAACATCGCCCGGATTACCACCACAACATGCCATTCCCTTGCCAGCTGCCGCCAGCACCAACCCTAATCCACCTAATTCAATCGCACAAACCGGCCCCAGTGGTGGTGATAAAAAGCCTATGATGATGCCAATACACTCGCCCCATACATCCAATACTATGCGAAATATACACCAACATATGTCACCCACAGTGTACGAAATGGCGGCATTAACGCAAGACTTGGATACTCAAGTAATTACCACGAAAATTAAAGAAGCTTTGCTTACTAATAATATTGGACAAAAAATTTTCGGTGAGGCTGTATTAGGTCTATCTCAGGGGTCCGTATCTGAGCTACTAAGTAAACCGAAACCGTGGCATATGTTATCTATAAAGGGACGTGAACCATTTATTCGCATGCAACTGTGGCTGTCCGATCCCAACAACGTAGAACGTTTACAggtattgaaaaatgaaaggCGCGAAGCTTCTAAGCGGCGTCGTTCGACAGGCCCCAATCAACAAGACAACAGTTCAGATACGTCTAGTAATGATACCAATGACTTTTATACTAGCAGCCCTGGACCTGGTTCAGTGGGTAGTTCAGTAAGTGGAGCCCCACcaaataaaaagcaaagaGTATTGTTTTCCGAGGAACAAAAAGAAGCTTTGCGTTTAGCTTTTGCTTTGGATCCTTATCCAAATCTTCAGACTATTGAATTTTTAGCTAATGAATTGGGTTTGGCCACGCGTACCATTACCAATTGGTTTCACAATCATCGAATGCGTTTGAAACAACAAGTGCCTCATGGACCACCCGGTGCCGAGAATCCAATACCTAGTCGAGAAAATACTAATGCCACGCCATTCGATCCCGTCCAATTCCgtatattattacaacaaaGATTACTTGAGTTACATAAGGAACGCATGGGCCTCACCGGCAATAATCCTTTACCTTACCCTCCCTATTTTGCTGCAGCTGCTCTTTTGGGGCGCAGCTTGGCAGGCATGCCGGGTGCTACCAGTACCGGACCAATAGCTGCTACCGAATCAGATTTGCAGGCATTAAATCAAGCTTTTAAAGAACAAATCTCTGGTTTGGATTTAAGCATGAGCTCTTTGAAACGGGAACGTCGCGATGACTTTGAAGATGATTTGGAAGGTAGCCACCTGAGTGATAACGAAAACGACTCTTTAGATGATGATGACAAAACTAGCGACTACAATAAAGATACGCCACGGTCTAGTTTAATAGGAGGTGGACGCTACTTAATGGGTGGATATGGGGGTGGTGGCATTATGCGTTCAAATCGTCGAAAGCCGGCTGCACCACAATGGGTAAATCCTGCTGGGCCCCCACCTATCCATCAGCCCATTCCAACCACAACCGAAATGGATCGTTTAATTAATGGAGTGTGTGTTATGCAAGGGGCTGGTAATCAATCGGATGAGGCAAAATTAGTTCAAGCTGAAGACAATGTTAACAAACCTCACGAGTTAAGCATTCTCgacaatgaaaatgaaaacgaaacGCAACGTTTTCTAGAGCCAGAAATTGTAATCAAACAAGAGAAACTGGATTGTGAAGGTGATAACAATGAGCATGCATCCGCCACAGGTGGAGACCATAAGAATGAGGAGAATCTTAATGTAGTCCAAGACGAACACTTAAGAATGGTGCGAGTACATCGCCTTAGCGCTGAAGAAGAACACACTATGAATACAGCACCAACGTGGAATTAttaa
- Protein Sequence
- MRATLAEKEVNTLKEQLSTNISTANTNVESENRTGNLVVTTTTNSNNSLDTVGAAAAVTTTATLIPPNALLSPSTINSINHNNNNNNNNTNNKLLNSVAAAISLQNGGNLLATTPSPSPPLCDNNGIAGAGQLNGCLNPKLFFNHAQQVMMMEAAAAAAAAAAANSVQQQSPLHSPQPAIQRSETEMLSCGVNNNNNNNPTTNIDDTKKMLDNTHKSSMASGGNLSSTAIEFEDHRTTVRPEEDSSRNNENQPTANELSATGSDRKNNNSNNNNNNNNNSSIYRSSSVSTNLSNSSISTNENCTEMQEESIAIEERNINRVEMESSACSGKDSQVPTTLCRDNQTDQQTQDVLLAAKDKEIKVLVEEVNRLRTLEHTHMLKIRRLEENIDAKQQHIVRLQACLNKHHLEVVVEEVKGEEEEEEKSGDKSMARIEESCQQQPLTIVKDVDDDMEMEHMEANFDAEKASQQQQQQQHSITEEHQQQSEDDECIKLTEHMGEINIKKETQSPLTLNALSQQNAAIAAAAVAAVACNNDPNKFQELLMERTKALVAAEVLKNSEEPTIDQEEDENDDNEEEEEYPNDNNVANVSENVAQHVDEMFRVPKIEIEIEDDDDNDGDDDDDNKSLDDCDHLEKQLERHENIPKPMTENCLLPADEKLSAITTAITTSATTETTTTNVDLTSANFRRNVERFGSLLGEELVNSYWRRSFDMSLNNNNNNNNNNNNNNNVAKATQHHQHHHHHHQQHMMLQQAVHHQHQQQSHLTHHHHLEQQPQLESQHQQQQQQQQHHHSQHGPSSTALLSQLVNSTFASQQNPTQTNSSTLRSTDAMNQQHMPPTHHHSQQLALHHHHHQHHMSSASNEHHDHNKSARSHHDSSASSASTPNLQDHRSGEEHILSSLNGSHKSLEDNNNSLCATPTNPMATTHHMPHAFLPGLPFQFQDRGHFHFAEDMQLPPGTSMAGHLGESLIPKSDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRIFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWSCDENAVMLLKSLIPKKDSGLPPYGGREDVMSDERIAHILSETSSLIKSSASSALQHSFKEDQQRRSLEDSHGNEDSKSPLQHSTSPFFKDQLKSTHDSMMQNPNMHMRPDDMNPEKMARLYHEIMSRVPRDAFPGFVLNPFFNSALPSAAGVGNSSNAFPSLTGEDNVRVAFEREMVKMQHQHQHHHQQQQSGFPSFSNLLALQQQMLNGAQDLSVGKEMPVKEGKNTASRNSFDSVPSVGSIDSSTSVVQNTPNAKENSSTSVERLYSGMSQSDGGNITPVPQTSNSAPSQNTNSAAPSPLSNSILPPAMAVSEEFSSTASPLQRMASITNSLITQPPIPPHHPQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGAPQLPQGLANKIQGTLPMQKMINDLKMQEPTQAQHIMQQMQAAAVMSAAMQQQHQQQSQQSHHHQAAAAVQAVQAAAAQAAQHHQSMLLTSPGLPPQHAIPLPAAASTNPNPPNSIAQTGPSGGDKKPMMMPIHSPHTSNTMRNIHQHMSPTVYEMAALTQDLDTQVITTKIKEALLTNNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDPNNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPNKKQRVLFSEEQKEALRLAFALDPYPNLQTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPPGAENPIPSRENTNATPFDPVQFRILLQQRLLELHKERMGLTGNNPLPYPPYFAAAALLGRSLAGMPGATSTGPIAATESDLQALNQAFKEQISGLDLSMSSLKRERRDDFEDDLEGSHLSDNENDSLDDDDKTSDYNKDTPRSSLIGGGRYLMGGYGGGGIMRSNRRKPAAPQWVNPAGPPPIHQPIPTTTEMDRLINGVCVMQGAGNQSDEAKLVQAEDNVNKPHELSILDNENENETQRFLEPEIVIKQEKLDCEGDNNEHASATGGDHKNEENLNVVQDEHLRMVRVHRLSAEEEHTMNTAPTWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00384473; iTF_01114800; iTF_01114912; iTF_01114102; iTF_01113998;
- 90% Identity
- iTF_01114102;
- 80% Identity
- iTF_00384473;