Ofri012243.1
Basic Information
- Insect
- Ornithomya fringillina
- Gene Symbol
- Arid4b
- Assembly
- GCA_963978525.1
- Location
- OZ021693.1:9661748-9663656[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-29 3.3e-26 91.6 0.1 1 88 307 392 307 393 0.95
Sequence Information
- Coding Sequence
- ATGGGTGGTAAAGGGAACATTTTACCACGAAAGAATGGACAAGTGGACGATCCACCCTATTTACTCGTGGGCACGGAAGTCAGTGCTAAGTATAAAGGGGCATTTTGTGAGGCCAAGGTTAGCAAAGTGGTGCGgaatattaaagttaaggtcgcTTATAAACAGGGATTGGGTTCGGGTATTGTGTCGGATGATGAAATCAAAGCGACACCCGGTCAATTGAGGGTTGGTGCGGTCGTGGAAGTGCGCCATCCGGAACGTAAAGATTACGTTGAAGCTACTGTTACTAAAGTACAGGATTGTTCGCAGTATACGGTGGTGTTCGATGATGGCGACATTACCACATTGCGTCGTACAGCATTGTGTTTGAAGAGTGGCCGTCATTTTAATGAGAGCGAAACTTTGGATCAGCTACCGCTAACACATCCCGAACATTTTGGCAATCCTGTTGTGGGTGGACGTCGCGGCCGCAGACGGGGCCATTTGAACGAGGATAGTTCTGATGATGGCGATGAAAGCGACACTAAGGAGGTAGTGAATGAAAAAGAGGAGCACATTGGGAAAGTGGTTTGTGTcgaaactgagtcgaagaaaAAAGATAAAGAAAAATGGTTCCCAGCTCTGGTAGTGGCGCCCACAGCTCAGGCCACTGTACGTATCCGGGTGAAAGATGAGTATTTGGTGCGCTCCTTTAAAGATGGCCGTTATTATACGGTACCCAAAAAAGAAGCAACGGAATTTACGCGTGAAGCGGCCGCCAAACAAGATGGTCCCGCCGTACAGGCTGCTCTGGAATATTTAGATAATGATATTCTGCCACCCCATTGGGATCGTGATTCATTGTTCGGCCTAAGCAATTCCTCTAGTGAAAATGAAGATGAAGTCGATTCCGATTCGTCGGACGATGAGCCTAGAGAAGAGAAGGATCGTTTTGTGGCGCAACTTTACAAATATATGGATGATCGTGGCACTCCCTTAAACAAAGTGCCATCTATACAGAATCGTGATGTAGATTTGTACCGCTTGTTTCGCGCTGTCCAAAAACGTGGTGGATATAACCGCGTCACCGCACAAAATCAATGGAAATCCATAGCAATACGTTTGGGCTTCACACCCGTCAGCATCAGTATCACCAATCTGGTAAAGCaagcgtataaaaaatttcttcaacCCTATGGAGAGTTTCATCGCAAGTTGGGCTGTTCAATGTTAATGTCTCCGCGCAATTCGAATCGCAGTAAAGGTCGCAGTTTAGTGAGAGCTAATTCGGTAGCGTCACCGAAACTGGCTGATCCAAATAAGGAGGTGCCTGCCACTACGAGCAAATTAGTAACAGCCTCACCATACAGCGCTTCAACCAGCAGCAATACCTCCAGTAACCCTGCTTCCACTGCTGCTACCTTATCAACggcgacaacaacaataccaacaccAGTACCAACTGTAATAGCGGCAACAGTAGCTTCAGAGGAATCCGAAGATACCAGTGAATCTAGTCAGGATGCTGGTAAGAATAATAAACGGAAGTCCTTACCAGTAGGGAACACGGGCAAAGTAAAGAGTATCGTTGAgaaatatgaagaaaaattactaaaaGATGACGGAGATGTGCCCTTGTCGAAAATGAAAGCTGCAGCAGCTCTTAAGGACAATATCGAATccaaagaaaaggaaaaagaaaaagacaaaGATTCTGGTGGATCAAAAGAATGCTCTTCCGGGCATGTGACCAGAGATTCATCACCGGCGGGTAAGTGA
- Protein Sequence
- MGGKGNILPRKNGQVDDPPYLLVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVSDDEIKATPGQLRVGAVVEVRHPERKDYVEATVTKVQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGHLNEDSSDDGDESDTKEVVNEKEEHIGKVVCVETESKKKDKEKWFPALVVAPTAQATVRIRVKDEYLVRSFKDGRYYTVPKKEATEFTREAAAKQDGPAVQAALEYLDNDILPPHWDRDSLFGLSNSSSENEDEVDSDSSDDEPREEKDRFVAQLYKYMDDRGTPLNKVPSIQNRDVDLYRLFRAVQKRGGYNRVTAQNQWKSIAIRLGFTPVSISITNLVKQAYKKFLQPYGEFHRKLGCSMLMSPRNSNRSKGRSLVRANSVASPKLADPNKEVPATTSKLVTASPYSASTSSNTSSNPASTAATLSTATTTIPTPVPTVIAATVASEESEDTSESSQDAGKNNKRKSLPVGNTGKVKSIVEKYEEKLLKDDGDVPLSKMKAAAALKDNIESKEKEKEKDKDSGGSKECSSGHVTRDSSPAGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00749476;
- 90% Identity
- iTF_01113989;
- 80% Identity
- -