Ochl003959.1
Basic Information
- Insect
- Ornithomya chloropus
- Gene Symbol
- Arid4b
- Assembly
- GCA_963971445.1
- Location
- OZ020529.1:47897600-47899501[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-29 4.1e-26 91.6 0.1 1 88 307 392 307 393 0.95
Sequence Information
- Coding Sequence
- ATGGGTGGTAAAAGGAACATTTTACCACAAAGGAATGGACAAGTGGACGATCCACCCTATTTACTCGTGGGCACGGAAGTCAGTGCTAAGTATAAAGGTGCATTTTGTGAGGCCAAGGTTAGCAAAGTGGTGCGGAATATTAAAGTTAAGATCGCTTATAAGCAGGGGTTGGGTTCGGGTATTGTGTCGGATGATGAAATCAAAGCGACACCCGGTCAACTGAGAGTTGGTGCGGTCGTGGAAGTGCGCCATCCGGAACGTAAAGATTACGTTGAAGCTACTATTACTAAAGTGCAGGATTGTTCGCAGTATACGGTGGTGTTCGATGATGGCGACATTACTACGTTGCGTCGTACAGCATTGTGTTTGAAGAGTGGGCGTCATTTTAATGAGAGCGAAACTTTGGATCAGCTACCGCTAACACATCCCGAACATTTTGGCAATCCTGTTGTGGGTGGACGTCGTGGTCGCAGACGGGGCCATTTGAATGAGGATAGTTCTGATGATGGCGATGAAAGCGACGCTAAGGAGGTGGTGAATGAAAAAGAGGAGCACATTGGGAAAGTGGTTTGTGTCGAAACTGAGTCGAAGAAAAAAGATAAAGAAAAATGGTTCCCAGCTCTGGTAGTGGCGCCCACAGCTCAGGCCACTGTACGTATCCGGGTGAAAGATGAGTATTTGGTGCGCTCCTTTAAAGATGGTCGCTACTATACGGTACCCAAAAAGGAAGCAACGGAATTTACGCGTGAAGCGGCCGCCAAACAAGATGGTCCCGCCGTACAGGCTGCTCTGGAATATTTAGATAATGATATTCTGCCACCCCATTGGGATCGTGATTCATTGTTTGGCCTAAGCAATTCCTCTAGTGAAAATGAAGATGAAGTCGATTCCGATTCGTCGGACGATGAGCCCAGAGAAGAGAAGGATCGTTTTGTGGCTCAACTTTACAAATATATGGACGATCGTGGCACTCCCTTAAACAAAGTGCCATCTATACAGAATCGTGATGTAGATTTGTACCGGTTGTTTCGGGCTGTCCAAAAACGTGGTGGTTATAATCGCGTCACCGCACAAAATCAATGGAAATCTATTGCAATACGTTTGGGCTTCACACCCGTCAGCATCAGTATCACCAATCTGGTAAAACAagcgtataaaaaatttttgcaacCCTACGGAGAGTTTCATCGCAAGTTGGGCTGTTCAATGTTGATGTCTCCGCGCAATTCGAATCGCAGTAAAGGTCGCAGTTTAGTGAGAGCCAATTCGGTAGCGTCACCGAAACTGGCTGATCCAAATAAGGAGGTGCCTGCCACCACCAGCAAATTAGTAACAGCCTCACCTTACAGCGCTTCAACCAGTAATCCTGCTTCCACTGCCGCTTCCTTATCAAcggcaacaacagcaataacaataccAACACCAGTACCAACCGTAATAGCGGCAACGGTAGCTTCAGAGGAATCCGAAGATACCAGTGAATCTAGTCAAGATGCTGGAAAGAATAATAAACGGAAATCCTTACCAGTAGGGAACACGGGCAAAGTAAAGAGTATCGTTGAGAagtatgaagaaaaattactAAAAGATGACGGGGATGTGCCCTTGTCGAAAATGAAGGCTGCAGCAGCTCTTAAGGACAACATCGAATccaaagaaaaggaaaaagaaaaagacaaAGATTCTGGCGGATCAAAAGAAGGCTCTTCTGGGCATGTGACCAGAGATTCATCACCGGCGGGTAAGTGA
- Protein Sequence
- MGGKRNILPQRNGQVDDPPYLLVGTEVSAKYKGAFCEAKVSKVVRNIKVKIAYKQGLGSGIVSDDEIKATPGQLRVGAVVEVRHPERKDYVEATITKVQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGHLNEDSSDDGDESDAKEVVNEKEEHIGKVVCVETESKKKDKEKWFPALVVAPTAQATVRIRVKDEYLVRSFKDGRYYTVPKKEATEFTREAAAKQDGPAVQAALEYLDNDILPPHWDRDSLFGLSNSSSENEDEVDSDSSDDEPREEKDRFVAQLYKYMDDRGTPLNKVPSIQNRDVDLYRLFRAVQKRGGYNRVTAQNQWKSIAIRLGFTPVSISITNLVKQAYKKFLQPYGEFHRKLGCSMLMSPRNSNRSKGRSLVRANSVASPKLADPNKEVPATTSKLVTASPYSASTSNPASTAASLSTATTAITIPTPVPTVIAATVASEESEDTSESSQDAGKNNKRKSLPVGNTGKVKSIVEKYEEKLLKDDGDVPLSKMKAAAALKDNIESKEKEKEKDKDSGGSKEGSSGHVTRDSSPAGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00749476;
- 90% Identity
- iTF_01114792; iTF_00384356;
- 80% Identity
- -