Ochl001468.1
Basic Information
- Insect
- Ornithomya chloropus
- Gene Symbol
- pnr
- Assembly
- GCA_963971445.1
- Location
- OZ020529.1:16318556-16320834[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.6 1.1e+04 -3.5 0.0 16 25 189 198 188 198 0.85 2 3 0.16 3.8e+02 1.2 4.1 3 23 418 438 417 440 0.86 3 3 3.5e-17 8.2e-14 51.3 6.9 1 34 471 503 471 505 0.97
Sequence Information
- Coding Sequence
- ATGGAAGGACAgacccaacaacaacagcatatGCAAAATTCGTTACCCCAAcaccaacatcaacatcaacatcatcaaaGTTTATTAGAGAAAATTAAAAGTGAAGTCAACGGTCACGACAGTTCAGCGCAATTAAATCACGCGTCGCCCGTTAATGTTGTTCTAGAGAAGCACAACAATCAAACAGGCGATCATCAGAATCAACAGCCGCACCTAACTGCTCACACtaatcagcaacaacaacaacactctCAACAATCAGCTGCCCATGCTCATACTGCGTCAACAATCGTTCAAACCCATCAATCAACGAACAATGTAGGAATTCAAACGGCCACGCACAATTCAATAAATGCTAATGATGGGTATGTGTCTTTAAACCGAAATCAACATCGACGTATATTAACCGCTTCGGGGGAATTGTTGGACGTGGATCAAATTGATCAGCATTCTTCACCTAGTGACTACATGCAAATGCCACCGCGCCACtcagaacaacaacaacaacaacatcatcaacaacaagcATCGGGCAGTACTACAGGATATACGTACATCACGAGTGAAAATGGTCAGACCATGATTTGTGCCGCAGCAACTGCGGGAACTATTAAAGTGGAAACGGACGATAAGGATCACATATTAACTGAGActcagcaacaacagcaactgcaacaacaccaacaatgcCCCACACCAAATGGAACTTATGGTGAAGCTATGGTAGTACATCACCACCACAATCCGCATTCGTTAAACAATGCCACGCTAAGTCATGCAGCAGCTTTACGTTTCGAAGACGATGCACGCTTTGCAGCTTCTTTAACAGATAATGGCAGCAACGGCAGTGCCTCTCTATATTACGATGCTTCAGTGATTGATGCCACTACGCACGCCAATGAGACGAAAACTTTCACCGATCTGGGTAATACTTCCTACCTAAATTATGCCGCCACCTCAGCCTCATATCATTTGGCGCAAAGCAATACCATTTACAGTACCACCGGTCCACCACAATTGCTTACTAAGGCGGAGTCCAATTTGGGTTTAGTGCGCCAGCCGCCACAATATCAATCGATGGCAATGTTCGATTCGGTTAATGCTGCAGTACAAGAACAAGCTCTTTGGCCAGGTTCGTCGGTAgaatatcaaaatttgaattttGTGGTTGAAGATTATCCTTCAACAAATATAACAGCGGGAGCCTGGACCAGTGCTACCTCATTAACACCATATGAGTCAGCTTTGGCTCAATGCGATCACTGCAATTCACCGTTGTTGCGAAGAggtaatgaattattttgCACCCTGTGCTGTCCACCGACGGTACGACCAAATGTACGCATAAGTGCCAGGCACGCCAAACCGAAGACCGCGAATGCCTCTAGCAATAAACGAATTGGCGTCACATGTGCTAATTGTCAAACAAATTCAACCACATTATGGCGTCGCAATAATGAAGGCAATCCTGTATGCAATGCATGCGGTTTATATTTCAAATTGCACAACATGAATCGCCCCTTGTCCATGAAGAAAGAGGGCATTCAAAAGCGTAaacgaaaaccaaaaaataacGGGGGAGCACCATTACGACCACCATTACCCAGTATACAGTTAAACGGCCCTCTCGTAAGCAGTCCTCTCTATCCATCTCAGGTTCCACTCGGTTTGCCCATCCATCCTCAAGGTTCGGTTGCATCTGACCTACAAGACATGTCTACAACTGTTCATCGTTCTGTGGCTATAGAACAATCTGATATAACCTTGAATATGTCACGGGCCCATATGAACACTGACAGTCATTCACCGTACAATAATCCGCCGTCTCAGAGACAATCACCTCATTTGCCAAATTCAGCGCCCTTGGGTCGATCCCTAACGCAAACgGTGCCATCACTAGAGGTACCGCCACGTACCACCAGCACTAGTTGTGAAATACCCACTAGTGTAATAACGCGTACGGGTCTGCCAGAGCGCGTTTCGAATAATTAA
- Protein Sequence
- MEGQTQQQQHMQNSLPQHQHQHQHHQSLLEKIKSEVNGHDSSAQLNHASPVNVVLEKHNNQTGDHQNQQPHLTAHTNQQQQQHSQQSAAHAHTASTIVQTHQSTNNVGIQTATHNSINANDGYVSLNRNQHRRILTASGELLDVDQIDQHSSPSDYMQMPPRHSEQQQQQHHQQQASGSTTGYTYITSENGQTMICAAATAGTIKVETDDKDHILTETQQQQQLQQHQQCPTPNGTYGEAMVVHHHHNPHSLNNATLSHAAALRFEDDARFAASLTDNGSNGSASLYYDASVIDATTHANETKTFTDLGNTSYLNYAATSASYHLAQSNTIYSTTGPPQLLTKAESNLGLVRQPPQYQSMAMFDSVNAAVQEQALWPGSSVEYQNLNFVVEDYPSTNITAGAWTSATSLTPYESALAQCDHCNSPLLRRGNELFCTLCCPPTVRPNVRISARHAKPKTANASSNKRIGVTCANCQTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGGAPLRPPLPSIQLNGPLVSSPLYPSQVPLGLPIHPQGSVASDLQDMSTTVHRSVAIEQSDITLNMSRAHMNTDSHSPYNNPPSQRQSPHLPNSAPLGRSLTQTVPSLEVPPRTTSTSCEIPTSVITRTGLPERVSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00384955;
- 90% Identity
- iTF_00384955;
- 80% Identity
- -