Cpal005776.1
Basic Information
- Insect
- Crataerina pallida
- Gene Symbol
- pnr
- Assembly
- GCA_949710015.1
- Location
- OX453290.1:24035382-24037656[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.7 8e+03 -3.5 0.0 16 25 182 191 181 191 0.85 2 3 0.095 2.8e+02 1.2 4.1 3 23 411 431 410 433 0.86 3 3 2.1e-17 6e-14 51.3 6.9 1 34 464 496 464 498 0.97
Sequence Information
- Coding Sequence
- ATGGAAGGACAgacccaacaacaacagcatatGCAAAATTCGTTAcctcaacatcaacatcaacatcatcaaaatttattagagAAAATAAAGAGTGAAGTCAACGGTCACGACAGTTCAGCGCAATTAAGTCACGCGTCGCCCGTTAATGTTGTTCTAGAGAAGCACAACAATCAAACAGGAGATCATCAGAATCAACAGCCGCACCTAACTGCTCATACtaatcagcaacaacaacactctCAACAATCAGCAGCCCATGCTCATACCGCGTCAACAATCGTTCAAACCCATCAATCAACGAACAATGTAGGAATTCAAACGGCCACGCACAATTCAATAAATACTAATGATGGGTATGTGTCTTTAAACCGAAATCAACATCGACGTATTTTAACCGCTTCGGGGGAATTGTTGGACGTGGATCAAATTGATCAGCATTCTTCACCCAGTGACTACATGCAAATGCCACAGCGCCACTCagaccaacaacaacaacaacaagcatcGGGCAGTACTACAGGATATACGTACATCACGAGTGAAAATGGTCAGACCATGATTTGTGCCGCAGCAACTGCGGGATCTATTAAAGTAGAAACAGACGATAAGGATCACATATTAACTGAGActcagcaacaacagcaactgcaacaacaccaacaatgcCCCACACCAAATGAAACTTATGGTGAAGCTATGGTAGTGCATCACCACCACAATCCCCATTCGTTAAATAGTGCCACGCTAAGTCATGCAGCAGCTTTACGTTTCGAAGATGATGCACGCTTTGCAGCTTCTTTAACAGATAATGGCAGCAATGGCAGTGCCTCTCTGTACTATGATACTTCAGTGATTGATGCCACTACGCACGCCAATGAGACGAAAACTTTCACCGATCTGGGTAATACTTCCTACCTAAATTATGCAGCCTCCTCAGCCTCATATCATTTGGCGCAAAGCAACACCATTTACAGTACCACCGGTCCACCACAATTGCTTACTAAGGCAGAGTCAAATTTGGGTTTAGTGCGCCAGCCGCCGCAATATCAATCGATGGCAATGTTCGATTCTGTTAATGCTGCAGTACAAGAGCAAGCTCTTTGGCCAGGTTCCTCGGTagaatatcaaaatttgaattttGTGGTTGAAGATTATCCTTCAACAAATATAACAGCGGGAGCCTGGACCAGTGCTACCTCATTAACACCTTATGAATCGGCTTTGGCTCAATGCGATCACTGCAATTCACCTTTGTTGCGAAGAggtaatgaattattttgCACCCTGTGCTGTCCACCGACAGTAAGACCAAATGTACGCATAAGTGCCAGGCACGCCAAACCTAAGACCGCGAATGCCTCTAGCAATAAACGAACTGGCGTCACATGTGCTAATTGCCAAACAAATTCAACCACATTATGGCGTCGCAATAATGAAGGCAATCCTGTATGCAATGCATGCGGTTTATATTTCAAATTGCACAACATGAATCGCCCCTTGTCCATGAAGAAAGAGGGCATTCAAAAACGTAAACGAAAACCCAAAAATAACGGTGGAGCACCATTACGACCACCATTACCCAGTATGCAGTTAAACAGTCCTCTCGTAAGCAGTCCTCTCTATCCATCTCAGGTTCCACTCGGTTTGCCCATCCATCCTCAAGGTTCAGTTACATCTGACCTACAAGACATGTCTACAACTGTGCATCGTTCTGTGGCTTTAGAACAATCTGATATAACTTTGAATATGTCACGGGCCCATATGAACACTGACAGTCATTCGCCATACAATAATCCACAGTCTCAAAGACAATCACCTCATTTGCCAAATTCAGCGTCTTTAAGTCGTTCCATAACGCAAACGGTGCCATCACTAGAGGTGCCGCCACGTACCACCAGCACTAGTTGTGAAATACCCACTAGTGTAATAACACGTACGGGTCTGCCAGAGCGCGTTTCGAATAACTAA
- Protein Sequence
- MEGQTQQQQHMQNSLPQHQHQHHQNLLEKIKSEVNGHDSSAQLSHASPVNVVLEKHNNQTGDHQNQQPHLTAHTNQQQQHSQQSAAHAHTASTIVQTHQSTNNVGIQTATHNSINTNDGYVSLNRNQHRRILTASGELLDVDQIDQHSSPSDYMQMPQRHSDQQQQQQASGSTTGYTYITSENGQTMICAAATAGSIKVETDDKDHILTETQQQQQLQQHQQCPTPNETYGEAMVVHHHHNPHSLNSATLSHAAALRFEDDARFAASLTDNGSNGSASLYYDTSVIDATTHANETKTFTDLGNTSYLNYAASSASYHLAQSNTIYSTTGPPQLLTKAESNLGLVRQPPQYQSMAMFDSVNAAVQEQALWPGSSVEYQNLNFVVEDYPSTNITAGAWTSATSLTPYESALAQCDHCNSPLLRRGNELFCTLCCPPTVRPNVRISARHAKPKTANASSNKRTGVTCANCQTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGGAPLRPPLPSMQLNSPLVSSPLYPSQVPLGLPIHPQGSVTSDLQDMSTTVHRSVALEQSDITLNMSRAHMNTDSHSPYNNPQSQRQSPHLPNSASLSRSITQTVPSLEVPPRTTSTSCEIPTSVITRTGLPERVSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01115394; iTF_01114674;
- 90% Identity
- iTF_01115394; iTF_01114674;
- 80% Identity
- -