Basic Information

Insect: Ornithomya chloropus
Gene Symbol: -
Assembly: GCA_963971445.1
Location: OZ020530.1:22084350-22088599[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00022 0.018 15.8 3.4 1 23 212 234 212 234 0.98

2 11 0.0011 0.094 13.6 10.5 1 23 240 262 240 262 0.96

3 11 0.00019 0.016 16.0 5.6 1 23 268 290 268 290 0.98

4 11 0.00042 0.035 15.0 2.4 1 23 296 318 296 318 0.95

5 11 2.5e-05 0.0021 18.8 0.5 1 23 324 346 324 346 0.97

6 11 4.1e-06 0.00034 21.3 0.2 1 23 352 374 352 374 0.98

7 11 0.00014 0.012 16.5 2.0 1 23 379 402 379 402 0.97

8 11 0.00082 0.068 14.0 0.4 1 23 408 431 408 431 0.91

9 11 0.0039 0.32 11.9 0.2 3 23 516 536 514 536 0.97

10 11 0.017 1.4 9.9 2.7 1 23 667 689 667 689 0.95

11 11 0.005 0.41 11.6 4.9 5 23 702 720 694 720 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00022	0.018	15.8	3.4	1	23	212	234	212	234	0.98
2	11	0.0011	0.094	13.6	10.5	1	23	240	262	240	262	0.96
3	11	0.00019	0.016	16.0	5.6	1	23	268	290	268	290	0.98
4	11	0.00042	0.035	15.0	2.4	1	23	296	318	296	318	0.95
5	11	2.5e-05	0.0021	18.8	0.5	1	23	324	346	324	346	0.97
6	11	4.1e-06	0.00034	21.3	0.2	1	23	352	374	352	374	0.98
7	11	0.00014	0.012	16.5	2.0	1	23	379	402	379	402	0.97
8	11	0.00082	0.068	14.0	0.4	1	23	408	431	408	431	0.91
9	11	0.0039	0.32	11.9	0.2	3	23	516	536	514	536	0.97
10	11	0.017	1.4	9.9	2.7	1	23	667	689	667	689	0.95
11	11	0.005	0.41	11.6	4.9	5	23	702	720	694	720	0.92

Sequence Information

Coding Sequence: ATGTGTGCCGCCCAAAGTAATCCAGCCCAAAGTTTTGGTGGTTATACCTGGGGTTTCGCCGACAATGCTCGGGCTGAATCCGTGCTAGAAATATCcccaaatattaattatacgGTTAGCAGTGAAAATATGCCTTATCTGTTATCAACGGATGGCTCATTAACGGTACAGAAAGATGTAAAAGGTGCTCTGGCGGCCAATAAAGGTGTGGTTCGTCGCATGGTATTAGTAAATGATCCATTTACCACCGGAGCCCAAAGAGTTATTACTGGAGCCGCTGCTGCCACCTCCAGTGTTGTGAAGAAGCCGGATCAACAGCAGGTGTTGAGTCTTAATTGTGACAAAAATTATCTTGTTAATCATCAAATGTACCAGTCGCACTCGCTGGCCAATGGTGTTGTGGATCCCAAGGCCCCTACGACTTTAACAGCAACTGGCGCAGGCGATATATTACCTGGTATCTCAGTGCAAGTGCAAAAAGTCATACAGGGCTTGGAGGATAATGACGAATCACAGGCGGCTGCTCCCAATTTGAAACTAGAACCGGGTACTTTGGAAATATCACCGAAAAATGAACTTCAagataatattaatttcaatgaGGGTGATGCTACGATTAAGAAAGAACGTCCCTACAGCTGTGAGGAGTGCGGTAAATCGTTTCTGTTAAAACATCATTTGACCACGCATGCCCGTGTTCATACCGGTGAACGTCCCCACATATGCACCCACTGTGGCAAAAGCTTCGCTCACAAGCATTGCCTCAACACACATTTGCTGTTGCACTCCACCGATCGTCCGTATCAGTGTGTTGAGTGCAAGAAAAGTTTCACCTTGAAACACCATTTGTTGACACATTCGCGTGTCCATTCACGCGATCGTCCCTTTGTATGTCAAGAATGCGGACGGACATTTCCACTTAAACGTCATCTGGTGACGCATAGTAAATTTCATGCTGGCGAACGACCCTACGTGTGCGAAGAGTGCGGTGAAAGTTTCGCCCAAGAGAATCATCTTATTATGCATTCACGATTCCATGGCTCGATTAATCCGTTTGTATGCCAAGACTGTGGTGTGACATTTCCCCGCAAGTTTCAACTGGTCAATCATGCACGCATTCATGGCAAAATACCTCATTCATGCACTGTTTGCGGCAAAGAGTTCTTACAGAAACGCACTTTAGTGTCACACATGCgTAGAGTACATACTGGGGATCAACCCTACCCTTGTATTAGTTGCGGTGAAGGCTTTATGACCAAGGCCGATTTGAATCATCATATACGCAGCACACATGGTGGAATTAATCCAAATTCTTCGACTACGGCCATAGTATCAAGCAATCCCATGATTAGTGCTCAGCAAAACACCCAAACTATACAGCAAGTACATCAGACTCAGgcacagcaacagcagcagcaacaacatcaacaacagcagcaacaacaacaccagaaTCATCCACAAACCATAACCGTGGTCAGTAATCCGAATAGTTCGACACTATTAACAGTAACCGCAAACGATCCGAACAGACCTCAGTATGGTTGTCGTGAATGTGGAAGTGCCTTCAATAGTCGCGAAGCATTCGCTTTACATCAACGTTTGCATACAGGCGATAAAAATCTTATGACCGATTTGTGTGCTTTGACGGCCGCTTTGCCGCCGCACTTCTTAAGCACGGCCAGCTTGCAGCCGGGCGGTACAACGGTGGTGGCCGCCAATCCCAGCATTATAGCCCAAAATCAAATGCCAGTTCAAATCATATCATCGACCGGTCAGGTTATGTCGCAAACAACTTTAGTGCAGGCCGCCGCCACAACAAATCCCCATTCAGTGGTTGCTGCTGTGCCCGCTGCCGTCGCCGTACAGCCCACACATCAACAGCATCAGCATGCCGCTCAACAGTTGGCAAATGGTACGGCGGCTGgccatcaacaacaacaacagcaggcGGCTGCACCGCAACATCAACAGCAGGCTCAGAATAAACCGAAATCACATTTTTGTGCCAGTTGTGGTAAAGGATTTGCCGCCAAACATGGCCTCATGCAGCATAATCGCCGTCATCCGAACGGTGGCTGCACCGTACGCACTCACGTGTGCGAGTGTGGCAAAGCCTTCTTTCAAAAGAATCACTTAATGTTGCACCAGCGCCAACATTTGGatacaaaatcaaatatacaacagcaaacgcaacagcaacaacaacagcagcagcagcaacaacagcaacaggtGTGTTGA
Protein Sequence: MCAAQSNPAQSFGGYTWGFADNARAESVLEISPNINYTVSSENMPYLLSTDGSLTVQKDVKGALAANKGVVRRMVLVNDPFTTGAQRVITGAAAATSSVVKKPDQQQVLSLNCDKNYLVNHQMYQSHSLANGVVDPKAPTTLTATGAGDILPGISVQVQKVIQGLEDNDESQAAAPNLKLEPGTLEISPKNELQDNINFNEGDATIKKERPYSCEECGKSFLLKHHLTTHARVHTGERPHICTHCGKSFAHKHCLNTHLLLHSTDRPYQCVECKKSFTLKHHLLTHSRVHSRDRPFVCQECGRTFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSINPFVCQDCGVTFPRKFQLVNHARIHGKIPHSCTVCGKEFLQKRTLVSHMRRVHTGDQPYPCISCGEGFMTKADLNHHIRSTHGGINPNSSTTAIVSSNPMISAQQNTQTIQQVHQTQAQQQQQQQHQQQQQQQHQNHPQTITVVSNPNSSTLLTVTANDPNRPQYGCRECGSAFNSREAFALHQRLHTGDKNLMTDLCALTAALPPHFLSTASLQPGGTTVVAANPSIIAQNQMPVQIISSTGQVMSQTTLVQAAATTNPHSVVAAVPAAVAVQPTHQQHQHAAQQLANGTAAGHQQQQQQAAAPQHQQQAQNKPKSHFCASCGKGFAAKHGLMQHNRRHPNGGCTVRTHVCECGKAFFQKNHLMLHQRQHLDTKSNIQQQTQQQQQQQQQQQQQQVC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00384740; iTF_00747654; iTF_00748414; iTF_00750658; iTF_00746896; iTF_00749144; iTF_00749880; iTF_01114439; iTF_01115182;
90% Identity: iTF_01114439; iTF_01115182; iTF_00384740;
80% Identity: -